RNA–Protein interactions for RNA: ENST00000329314.5

TRIM61-201, Transcript of tripartite motif containing 61, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM61, Length 1,582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM61-201ENST00000329314 PLCH1Q4KWH8 1693 aa23.8■■□□□ 1.4
TRIM61-201ENST00000329314 TCERG1O14776 1098 aaKnown RBP23.8■■□□□ 1.4
TRIM61-201ENST00000329314 MVPQ14764 893 aaKnown RBP23.8■■□□□ 1.4
TRIM61-201ENST00000329314 DCAF5Q96JK2 942 aa23.8■■□□□ 1.4
TRIM61-201ENST00000329314 PCDH11XQ9BZA7 1347 aa23.8■■□□□ 1.4
TRIM61-201ENST00000329314 PCDH11YQ9BZA8 1340 aa23.8■■□□□ 1.4
TRIM61-201ENST00000329314 EIF4A1P60842 406 aaKnown RBP23.79■■□□□ 1.4
TRIM61-201ENST00000329314 ADAMTS2O95450 1211 aa23.78■■□□□ 1.4
TRIM61-201ENST00000329314 JCADQ9P266 1359 aa23.78■■□□□ 1.4
TRIM61-201ENST00000329314 MRC1P22897 1456 aa23.78■■□□□ 1.4
TRIM61-201ENST00000329314 SLC52A2Q9HAB3 445 aa23.78■■□□□ 1.4
TRIM61-201ENST00000329314 HOXB7P09629 217 aa23.77■■□□□ 1.4
TRIM61-201ENST00000329314 NRAPQ86VF7 1730 aa23.77■■□□□ 1.4
TRIM61-201ENST00000329314 SHANK3Q9BYB0 1731 aa23.76■■□□□ 1.39
TRIM61-201ENST00000329314 NUTM2BA6NNL0 878 aaPredicted RBP23.76■■□□□ 1.39
TRIM61-201ENST00000329314 NUTM2EB1AL46 878 aaPredicted RBP23.76■■□□□ 1.39
TRIM61-201ENST00000329314 NUTM2AQ8IVF1 878 aaPredicted RBP23.76■■□□□ 1.39
TRIM61-201ENST00000329314 API5Q9BZZ5 524 aaKnown RBP23.76■■□□□ 1.39
TRIM61-201ENST00000329314 KCNQ3O43525 872 aa23.75■■□□□ 1.39
TRIM61-201ENST00000329314 DISP2A7MBM2 1401 aa23.75■■□□□ 1.39
TRIM61-201ENST00000329314 NKX1-1Q15270 411 aaPredicted RBP23.74■■□□□ 1.39
TRIM61-201ENST00000329314 CCDC30Q5VVM6 783 aa23.74■■□□□ 1.39
TRIM61-201ENST00000329314 TMEM57Q8N5G2 664 aa23.74■■□□□ 1.39
TRIM61-201ENST00000329314 USP35Q9P2H5 1018 aa23.74■■□□□ 1.39
TRIM61-201ENST00000329314 NWD2Q9ULI1 1742 aa23.74■■□□□ 1.39
TRIM61-201ENST00000329314 ABCC4O15439 1325 aa23.74■■□□□ 1.39
TRIM61-201ENST00000329314 DDX19BQ9UMR2 479 aa23.74■■□□□ 1.39
TRIM61-201ENST00000329314 HEG1Q9ULI3 1381 aa23.73■■□□□ 1.39
TRIM61-201ENST00000329314 PTPRCP08575 1304 aa23.73■■□□□ 1.39
TRIM61-201ENST00000329314 SLC4A2P04920 1241 aa23.73■■□□□ 1.39
TRIM61-201ENST00000329314 CHMP4AQ9BY43 222 aa23.73■■□□□ 1.39
TRIM61-201ENST00000329314 SLIT2O94813 1529 aa23.72■■□□□ 1.39
TRIM61-201ENST00000329314 STK31Q9BXU1 1019 aa23.72■■□□□ 1.39
TRIM61-201ENST00000329314 ITPRIPQ8IWB1 547 aa23.71■■□□□ 1.39
TRIM61-201ENST00000329314 NFATC2IPQ8NCF5 419 aa23.71■■□□□ 1.39
TRIM61-201ENST00000329314 KDM2BQ8NHM5 1336 aa23.7■■□□□ 1.38
TRIM61-201ENST00000329314 RGS12O14924 1447 aa23.69■■□□□ 1.38
TRIM61-201ENST00000329314 WNK3Q9BYP7 1800 aa23.69■■□□□ 1.38
TRIM61-201ENST00000329314 CACNA1FO60840 1977 aa23.69■■□□□ 1.38
TRIM61-201ENST00000329314 ERVV-2B6SEH9 535 aa23.69■■□□□ 1.38
TRIM61-201ENST00000329314 HDGFL1Q5TGJ6 251 aa23.69■■□□□ 1.38
TRIM61-201ENST00000329314 ZNF790Q6PG37 636 aa23.69■■□□□ 1.38
TRIM61-201ENST00000329314 THRAP3Q9Y2W1 955 aaKnown RBP23.69■■□□□ 1.38
TRIM61-201ENST00000329314 SPATA31A6Q5VVP1 1343 aa23.68■■□□□ 1.38
TRIM61-201ENST00000329314 CABP4P57796 275 aa23.68■■□□□ 1.38
TRIM61-201ENST00000329314 DDX54Q8TDD1 881 aaKnown RBP23.68■■□□□ 1.38
TRIM61-201ENST00000329314 SPATA31A1Q5TZJ5 1347 aa23.67■■□□□ 1.38
TRIM61-201ENST00000329314 GIGYF1O75420 1035 aaPredicted RBP23.67■■□□□ 1.38
TRIM61-201ENST00000329314 CENPQQ7L2Z9 268 aaPredicted RBP23.67■■□□□ 1.38
TRIM61-201ENST00000329314 CDCA7Q9BWT1 371 aaPredicted RBP23.66■■□□□ 1.38
TRIM61-201ENST00000329314 G2E3Q7L622 706 aa23.65■■□□□ 1.38
TRIM61-201ENST00000329314 CHMP4BQ9H444 224 aaKnown RBP23.65■■□□□ 1.38
TRIM61-201ENST00000329314 SLC39A6Q13433 755 aa23.65■■□□□ 1.38
TRIM61-201ENST00000329314 NECTIN2Q92692 538 aa23.65■■□□□ 1.38
TRIM61-201ENST00000329314 INTS3Q68E01 1043 aaKnown RBP23.64■■□□□ 1.37
TRIM61-201ENST00000329314 ZBTB40Q9NUA8 1239 aa23.64■■□□□ 1.37
TRIM61-201ENST00000329314 SPATA31A5Q5VU36 1347 aa23.63■■□□□ 1.37
TRIM61-201ENST00000329314 SPATA31A7Q8IWB4 1347 aa23.63■■□□□ 1.37
TRIM61-201ENST00000329314 EIF2S2P20042 333 aaKnown RBP23.63■■□□□ 1.37
TRIM61-201ENST00000329314 FLIIQ13045 1269 aa23.63■■□□□ 1.37
TRIM61-201ENST00000329314 PCDHB15Q9Y5E8 787 aa23.63■■□□□ 1.37
TRIM61-201ENST00000329314 ZBTB7BO15156 539 aaPredicted RBP23.62■■□□□ 1.37
TRIM61-201ENST00000329314 UNC5CLQ8IV45 518 aa23.62■■□□□ 1.37
TRIM61-201ENST00000329314 EXOC5O00471 708 aa23.61■■□□□ 1.37
TRIM61-201ENST00000329314 TTC5Q8N0Z6 440 aa23.61■■□□□ 1.37
TRIM61-201ENST00000329314 HSPA1LP34931 641 aa23.61■■□□□ 1.37
TRIM61-201ENST00000329314 TNS2Q63HR2 1409 aa23.61■■□□□ 1.37
TRIM61-201ENST00000329314 LRP6O75581 1613 aa23.6■■□□□ 1.37
TRIM61-201ENST00000329314 TOGARAM1Q9Y4F4 1720 aa23.6■■□□□ 1.37
TRIM61-201ENST00000329314 IGHDP01880 384 aa23.6■■□□□ 1.37
TRIM61-201ENST00000329314 BARGINQ6ZT62 677 aa23.6■■□□□ 1.37
TRIM61-201ENST00000329314 FNBP4Q8N3X1 1017 aaPredicted RBP23.59■■□□□ 1.37
TRIM61-201ENST00000329314 ZNF496Q96IT1 587 aaPredicted RBP23.59■■□□□ 1.37
TRIM61-201ENST00000329314 NGLY1Q96IV0 654 aa23.59■■□□□ 1.37
TRIM61-201ENST00000329314 C8orf37Q96NL8 207 aa23.59■■□□□ 1.37
TRIM61-201ENST00000329314 FMNL2Q96PY5 1086 aa23.59■■□□□ 1.37
TRIM61-201ENST00000329314 CHPF2Q9P2E5 772 aa23.59■■□□□ 1.37
TRIM61-201ENST00000329314 BCL9LQ86UU0 1499 aa23.59■■□□□ 1.37
TRIM61-201ENST00000329314 PAPPAQ13219 1627 aa23.58■■□□□ 1.37
TRIM61-201ENST00000329314 PRAMEF22A3QJZ6 481 aa23.58■■□□□ 1.37
TRIM61-201ENST00000329314 DBF4Q9UBU7 674 aaPredicted RBP23.58■■□□□ 1.37
TRIM61-201ENST00000329314 FKBP5Q13451 457 aaPredicted RBP23.57■■□□□ 1.36
TRIM61-201ENST00000329314 C5P01031 1676 aa23.57■■□□□ 1.36
TRIM61-201ENST00000329314 SNRPA1P09661 255 aaKnown RBP23.57■■□□□ 1.36
TRIM61-201ENST00000329314 VPS72Q15906 364 aa23.56■■□□□ 1.36
TRIM61-201ENST00000329314 RWDD1Q9H446 243 aaPredicted RBP23.56■■□□□ 1.36
TRIM61-201ENST00000329314 PHAXQ9H814 394 aaKnown RBP23.56■■□□□ 1.36
TRIM61-201ENST00000329314 UBR2Q8IWV8 1755 aa23.56■■□□□ 1.36
TRIM61-201ENST00000329314 GLI3P10071 1580 aa23.55■■□□□ 1.36
TRIM61-201ENST00000329314 CCT4P50991 539 aaKnown RBP23.55■■□□□ 1.36
TRIM61-201ENST00000329314 CCDC9Q9Y3X0 531 aaKnown RBP23.55■■□□□ 1.36
TRIM61-201ENST00000329314 PXDNLA1KZ92 1463 aa23.55■■□□□ 1.36
TRIM61-201ENST00000329314 F6X3S4 739 aa23.54■■□□□ 1.36
TRIM61-201ENST00000329314 DDB1Q16531 1140 aa23.54■■□□□ 1.36
TRIM61-201ENST00000329314 TMOD3Q9NYL9 352 aa23.54■■□□□ 1.36
TRIM61-201ENST00000329314 HDAC1Q13547 482 aaPredicted RBP23.53■■□□□ 1.36
TRIM61-201ENST00000329314 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.53■■□□□ 1.36
TRIM61-201ENST00000329314 KCPQ6ZWJ8 1503 aa23.53■■□□□ 1.36
TRIM61-201ENST00000329314 DDX21Q9NR30 783 aaKnown RBP eCLIP23.52■■□□□ 1.36
TRIM61-201ENST00000329314 N4BP2Q86UW6 1770 aaPredicted RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms