RNA–Protein interactions for RNA: ENST00000329245.8

TOP1MT-201, Transcript of DNA topoisomerase I mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1MT, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-201ENST00000329245 PKD1L3Q7Z443 1732 aa27.68■■■□□ 2.02
TOP1MT-201ENST00000329245 JCADQ9P266 1359 aa27.67■■■□□ 2.02
TOP1MT-201ENST00000329245 KDM6AO15550 1401 aaPredicted RBP27.67■■■□□ 2.02
TOP1MT-201ENST00000329245 EIF4A1P60842 406 aaKnown RBP27.66■■■□□ 2.02
TOP1MT-201ENST00000329245 MVPQ14764 893 aaKnown RBP27.66■■■□□ 2.02
TOP1MT-201ENST00000329245 SLC52A2Q9HAB3 445 aa27.66■■■□□ 2.02
TOP1MT-201ENST00000329245 SOS1Q07889 1333 aaPredicted RBP27.66■■■□□ 2.02
TOP1MT-201ENST00000329245 KCNQ3O43525 872 aa27.66■■■□□ 2.02
TOP1MT-201ENST00000329245 SLC4A2P04920 1241 aa27.65■■■□□ 2.02
TOP1MT-201ENST00000329245 DDX54Q8TDD1 881 aaKnown RBP27.65■■■□□ 2.02
TOP1MT-201ENST00000329245 NFATC2IPQ8NCF5 419 aa27.64■■■□□ 2.02
TOP1MT-201ENST00000329245 CCDC30Q5VVM6 783 aa27.64■■■□□ 2.01
TOP1MT-201ENST00000329245 ADAMTS7Q9UKP4 1686 aa27.63■■■□□ 2.01
TOP1MT-201ENST00000329245 ITPRIPQ8IWB1 547 aa27.63■■■□□ 2.01
TOP1MT-201ENST00000329245 STK31Q9BXU1 1019 aa27.63■■■□□ 2.01
TOP1MT-201ENST00000329245 VIRMAQ69YN4 1812 aaKnown RBP27.63■■■□□ 2.01
TOP1MT-201ENST00000329245 TMEM57Q8N5G2 664 aa27.62■■■□□ 2.01
TOP1MT-201ENST00000329245 NECTIN2Q92692 538 aa27.62■■■□□ 2.01
TOP1MT-201ENST00000329245 API5Q9BZZ5 524 aaKnown RBP27.62■■■□□ 2.01
TOP1MT-201ENST00000329245 CABP4P57796 275 aa27.6■■■□□ 2.01
TOP1MT-201ENST00000329245 AAMPQ13685 434 aa27.6■■■□□ 2.01
TOP1MT-201ENST00000329245 KDM3BQ7LBC6 1761 aa27.6■■■□□ 2.01
TOP1MT-201ENST00000329245 SCN11AQ9UI33 1791 aa27.6■■■□□ 2.01
TOP1MT-201ENST00000329245 DDX19BQ9UMR2 479 aa27.6■■■□□ 2.01
TOP1MT-201ENST00000329245 PLCH1Q4KWH8 1693 aa27.6■■■□□ 2.01
TOP1MT-201ENST00000329245 HDGFL1Q5TGJ6 251 aa27.59■■■□□ 2.01
TOP1MT-201ENST00000329245 HOXB7P09629 217 aa27.58■■■□□ 2.01
TOP1MT-201ENST00000329245 CHMP4AQ9BY43 222 aa27.58■■■□□ 2.01
TOP1MT-201ENST00000329245 EIF2S2P20042 333 aaKnown RBP27.57■■■□□ 2
TOP1MT-201ENST00000329245 SLC39A6Q13433 755 aa27.57■■■□□ 2
TOP1MT-201ENST00000329245 NKX1-1Q15270 411 aaPredicted RBP27.57■■■□□ 2
TOP1MT-201ENST00000329245 ZNF790Q6PG37 636 aa27.57■■■□□ 2
TOP1MT-201ENST00000329245 PTPRCP08575 1304 aa27.57■■■□□ 2
TOP1MT-201ENST00000329245 C8orf37Q96NL8 207 aa27.57■■■□□ 2
TOP1MT-201ENST00000329245 NGLY1Q96IV0 654 aa27.56■■■□□ 2
TOP1MT-201ENST00000329245 CCDC9Q9Y3X0 531 aaKnown RBP27.56■■■□□ 2
TOP1MT-201ENST00000329245 SIPA1L3O60292 1781 aaPredicted RBP27.56■■■□□ 2
TOP1MT-201ENST00000329245 SPATA31A1Q5TZJ5 1347 aa27.55■■■□□ 2
TOP1MT-201ENST00000329245 HSPA1LP34931 641 aa27.55■■■□□ 2
TOP1MT-201ENST00000329245 TSHZ2Q9NRE2 1034 aa27.55■■■□□ 2
TOP1MT-201ENST00000329245 ABCC4O15439 1325 aa27.54■■■□□ 2
TOP1MT-201ENST00000329245 SPATA31A6Q5VVP1 1343 aa27.54■■■□□ 2
TOP1MT-201ENST00000329245 ERVV-2B6SEH9 535 aa27.54■■■□□ 2
TOP1MT-201ENST00000329245 EXOC5O00471 708 aa27.54■■■□□ 2
TOP1MT-201ENST00000329245 TTC5Q8N0Z6 440 aa27.54■■■□□ 2
TOP1MT-201ENST00000329245 THRAP3Q9Y2W1 955 aaKnown RBP27.54■■■□□ 2
TOP1MT-201ENST00000329245 SLIT2O94813 1529 aa27.54■■■□□ 2
TOP1MT-201ENST00000329245 DISP2A7MBM2 1401 aa27.53■■■□□ 2
TOP1MT-201ENST00000329245 GIGYF1O75420 1035 aaPredicted RBP27.53■■■□□ 2
TOP1MT-201ENST00000329245 G2E3Q7L622 706 aa27.53■■■□□ 2
TOP1MT-201ENST00000329245 MRC1P22897 1456 aa27.53■■■□□ 2
TOP1MT-201ENST00000329245 CDCA7Q9BWT1 371 aaPredicted RBP27.51■■■□□ 2
TOP1MT-201ENST00000329245 NRAPQ86VF7 1730 aa27.51■■□□□ 1.99
TOP1MT-201ENST00000329245 UNC5CLQ8IV45 518 aa27.51■■□□□ 1.99
TOP1MT-201ENST00000329245 HEG1Q9ULI3 1381 aa27.51■■□□□ 1.99
TOP1MT-201ENST00000329245 SPATA31A5Q5VU36 1347 aa27.5■■□□□ 1.99
TOP1MT-201ENST00000329245 SPATA31A7Q8IWB4 1347 aa27.5■■□□□ 1.99
TOP1MT-201ENST00000329245 FLIIQ13045 1269 aa27.49■■□□□ 1.99
TOP1MT-201ENST00000329245 CENPQQ7L2Z9 268 aaPredicted RBP27.49■■□□□ 1.99
TOP1MT-201ENST00000329245 SHANK3Q9BYB0 1731 aa27.49■■□□□ 1.99
TOP1MT-201ENST00000329245 NWD2Q9ULI1 1742 aa27.49■■□□□ 1.99
TOP1MT-201ENST00000329245 CHMP4BQ9H444 224 aaKnown RBP27.49■■□□□ 1.99
TOP1MT-201ENST00000329245 PRAMEF22A3QJZ6 481 aa27.48■■□□□ 1.99
TOP1MT-201ENST00000329245 FKBP5Q13451 457 aaPredicted RBP27.48■■□□□ 1.99
TOP1MT-201ENST00000329245 CHPF2Q9P2E5 772 aa27.48■■□□□ 1.99
TOP1MT-201ENST00000329245 PCDHB15Q9Y5E8 787 aa27.48■■□□□ 1.99
TOP1MT-201ENST00000329245 KDM2BQ8NHM5 1336 aa27.47■■□□□ 1.99
TOP1MT-201ENST00000329245 ZNF496Q96IT1 587 aaPredicted RBP27.47■■□□□ 1.99
TOP1MT-201ENST00000329245 FMNL2Q96PY5 1086 aa27.46■■□□□ 1.99
TOP1MT-201ENST00000329245 ZBTB40Q9NUA8 1239 aa27.46■■□□□ 1.99
TOP1MT-201ENST00000329245 RGS12O14924 1447 aa27.46■■□□□ 1.99
TOP1MT-201ENST00000329245 ZBTB7BO15156 539 aaPredicted RBP27.46■■□□□ 1.99
TOP1MT-201ENST00000329245 INTS3Q68E01 1043 aaKnown RBP27.45■■□□□ 1.98
TOP1MT-201ENST00000329245 DBF4Q9UBU7 674 aaPredicted RBP27.45■■□□□ 1.98
TOP1MT-201ENST00000329245 IGHDP01880 384 aa27.44■■□□□ 1.98
TOP1MT-201ENST00000329245 DDB1Q16531 1140 aa27.44■■□□□ 1.98
TOP1MT-201ENST00000329245 MEX3CQ5U5Q3 659 aaKnown RBP27.44■■□□□ 1.98
TOP1MT-201ENST00000329245 PHAXQ9H814 394 aaKnown RBP27.44■■□□□ 1.98
TOP1MT-201ENST00000329245 F6X3S4 739 aa27.44■■□□□ 1.98
TOP1MT-201ENST00000329245 SLC4A10Q6U841 1118 aa27.44■■□□□ 1.98
TOP1MT-201ENST00000329245 FNBP4Q8N3X1 1017 aaPredicted RBP27.44■■□□□ 1.98
TOP1MT-201ENST00000329245 TMOD3Q9NYL9 352 aa27.44■■□□□ 1.98
TOP1MT-201ENST00000329245 BARGINQ6ZT62 677 aa27.43■■□□□ 1.98
TOP1MT-201ENST00000329245 LRP6O75581 1613 aa27.43■■□□□ 1.98
TOP1MT-201ENST00000329245 SNRPA1P09661 255 aaKnown RBP27.42■■□□□ 1.98
TOP1MT-201ENST00000329245 BCL9LQ86UU0 1499 aa27.42■■□□□ 1.98
TOP1MT-201ENST00000329245 VPS72Q15906 364 aa27.41■■□□□ 1.98
TOP1MT-201ENST00000329245 RWDD1Q9H446 243 aaPredicted RBP27.41■■□□□ 1.98
TOP1MT-201ENST00000329245 USP21Q9UK80 565 aa27.41■■□□□ 1.98
TOP1MT-201ENST00000329245 TNS2Q63HR2 1409 aa27.41■■□□□ 1.98
TOP1MT-201ENST00000329245 ANXA1P04083 346 aa27.4■■□□□ 1.98
TOP1MT-201ENST00000329245 CACNA1FO60840 1977 aa27.39■■□□□ 1.98
TOP1MT-201ENST00000329245 WNK3Q9BYP7 1800 aa27.39■■□□□ 1.97
TOP1MT-201ENST00000329245 CCT4P50991 539 aaKnown RBP27.39■■□□□ 1.97
TOP1MT-201ENST00000329245 USP16Q9Y5T5 823 aa27.37■■□□□ 1.97
TOP1MT-201ENST00000329245 FAM98CQ17RN3 349 aaKnown RBP27.37■■□□□ 1.97
TOP1MT-201ENST00000329245 PIGBQ92521 554 aa27.37■■□□□ 1.97
TOP1MT-201ENST00000329245 HYPKQ9NX55 129 aa27.37■■□□□ 1.97
TOP1MT-201ENST00000329245 PROSER3Q2NL68 480 aa27.36■■□□□ 1.97
TOP1MT-201ENST00000329245 DDX21Q9NR30 783 aaKnown RBP eCLIP27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms