RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 MATR3P43243 847 aaKnown RBP eCLIP24.54■■□□□ 1.52
RNF40-201ENST00000324685 CAMK4Q16566 473 aa24.54■■□□□ 1.52
RNF40-201ENST00000324685 SLC26A8Q96RN1 970 aa24.54■■□□□ 1.52
RNF40-201ENST00000324685 IDH1O75874 414 aaKnown RBP24.54■■□□□ 1.52
RNF40-201ENST00000324685 CASQ1P31415 396 aa24.54■■□□□ 1.52
RNF40-201ENST00000324685 CCDC83Q8IWF9 413 aa24.54■■□□□ 1.52
RNF40-201ENST00000324685 KIF5CO60282 957 aa24.53■■□□□ 1.52
RNF40-201ENST00000324685 TMPOP42166 694 aaKnown RBP24.53■■□□□ 1.52
RNF40-201ENST00000324685 CCDC91Q7Z6B0 441 aa24.53■■□□□ 1.52
RNF40-201ENST00000324685 TSG101Q99816 390 aa24.53■■□□□ 1.52
RNF40-201ENST00000324685 NEBLO76041 1014 aa24.53■■□□□ 1.52
RNF40-201ENST00000324685 TRIM21P19474 475 aaKnown RBP24.52■■□□□ 1.52
RNF40-201ENST00000324685 ALDH1L2Q3SY69 923 aa24.52■■□□□ 1.52
RNF40-201ENST00000324685 ZSCAN29Q8IWY8 852 aaPredicted RBP24.52■■□□□ 1.52
RNF40-201ENST00000324685 HMGB1P09429 215 aaKnown RBP24.51■■□□□ 1.51
RNF40-201ENST00000324685 KIF18AQ8NI77 898 aa24.51■■□□□ 1.51
RNF40-201ENST00000324685 NSD3Q9BZ95 1437 aa24.51■■□□□ 1.51
RNF40-201ENST00000324685 CTAGE5O15320 804 aa24.51■■□□□ 1.51
RNF40-201ENST00000324685 SEC63Q9UGP8 760 aaKnown RBP24.51■■□□□ 1.51
RNF40-201ENST00000324685 CCDC196A0A1B0GTZ2 297 aa24.51■■□□□ 1.51
RNF40-201ENST00000324685 PRPF40BQ6NWY9 871 aaKnown RBP24.51■■□□□ 1.51
RNF40-201ENST00000324685 RRS1Q15050 365 aaKnown RBP24.5■■□□□ 1.51
RNF40-201ENST00000324685 ERICH4A6NGS2 130 aa24.5■■□□□ 1.51
RNF40-201ENST00000324685 SSR1P43307 286 aaKnown RBP24.5■■□□□ 1.51
RNF40-201ENST00000324685 DNAI2Q9GZS0 605 aa24.5■■□□□ 1.51
RNF40-201ENST00000324685 TNIP1Q15025 636 aa24.49■■□□□ 1.51
RNF40-201ENST00000324685 USP5P45974 858 aa24.49■■□□□ 1.51
RNF40-201ENST00000324685 EXOC6BQ9Y2D4 811 aa24.49■■□□□ 1.51
RNF40-201ENST00000324685 ABCC11Q96J66 1382 aa24.49■■□□□ 1.51
RNF40-201ENST00000324685 HECW1Q76N89 1606 aa24.49■■□□□ 1.51
RNF40-201ENST00000324685 FGFR1OPO95684 399 aaKnown RBP24.49■■□□□ 1.51
RNF40-201ENST00000324685 ARAP1Q96P48 1450 aa24.49■■□□□ 1.51
RNF40-201ENST00000324685 DCAF8L1A6NGE4 600 aa24.48■■□□□ 1.51
RNF40-201ENST00000324685 TOP1P11387 765 aaKnown RBP24.48■■□□□ 1.51
RNF40-201ENST00000324685 METTL24Q5JXM2 366 aa24.48■■□□□ 1.51
RNF40-201ENST00000324685 VPS36Q86VN1 386 aa24.48■■□□□ 1.51
RNF40-201ENST00000324685 MAP2K1Q02750 393 aaPredicted RBP24.47■■□□□ 1.51
RNF40-201ENST00000324685 CGNQ9P2M7 1197 aaKnown RBP24.47■■□□□ 1.51
RNF40-201ENST00000324685 DUSP27Q5VZP5 1158 aa24.47■■□□□ 1.51
RNF40-201ENST00000324685 PIBF1Q8WXW3 757 aa24.47■■□□□ 1.51
RNF40-201ENST00000324685 NEMFO60524 1076 aa24.47■■□□□ 1.51
RNF40-201ENST00000324685 AEBP2Q6ZN18 517 aaPredicted RBP24.47■■□□□ 1.51
RNF40-201ENST00000324685 STARD3NLO95772 234 aa24.46■■□□□ 1.51
RNF40-201ENST00000324685 FERMT3Q86UX7 667 aa24.46■■□□□ 1.51
RNF40-201ENST00000324685 DYDC1Q8WWB3 177 aa24.46■■□□□ 1.51
RNF40-201ENST00000324685 PRG4Q92954 1404 aaPredicted RBP24.46■■□□□ 1.51
RNF40-201ENST00000324685 HMGB2P26583 209 aaKnown RBP24.46■■□□□ 1.51
RNF40-201ENST00000324685 CLIP2Q9UDT6 1046 aa24.46■■□□□ 1.51
RNF40-201ENST00000324685 PHF23Q9BUL5 403 aaPredicted RBP24.46■■□□□ 1.51
RNF40-201ENST00000324685 LARP1Q6PKG0 1096 aaKnown RBP24.46■■□□□ 1.51
RNF40-201ENST00000324685 C8orf76Q96K31 380 aa24.46■■□□□ 1.51
RNF40-201ENST00000324685 CACNA2D4Q7Z3S7 1137 aa24.45■■□□□ 1.51
RNF40-201ENST00000324685 SPINK5Q9NQ38 1064 aaPredicted RBP24.45■■□□□ 1.5
RNF40-201ENST00000324685 DAPK1P53355 1430 aa24.45■■□□□ 1.5
RNF40-201ENST00000324685 KIF4BQ2VIQ3 1234 aa24.45■■□□□ 1.5
RNF40-201ENST00000324685 TMOD2Q9NZR1 351 aa24.44■■□□□ 1.5
RNF40-201ENST00000324685 KCNH5Q8NCM2 988 aa24.44■■□□□ 1.5
RNF40-201ENST00000324685 RAB34Q9BZG1 259 aa24.43■■□□□ 1.5
RNF40-201ENST00000324685 POTEB2H3BUK9 544 aa24.43■■□□□ 1.5
RNF40-201ENST00000324685 USO1O60763 962 aaKnown RBP24.43■■□□□ 1.5
RNF40-201ENST00000324685 PRDM11Q9NQV5 511 aa24.43■■□□□ 1.5
RNF40-201ENST00000324685 TROQ12816 1431 aaPredicted RBP24.43■■□□□ 1.5
RNF40-201ENST00000324685 NKTRP30414 1462 aaKnown RBP24.43■■□□□ 1.5
RNF40-201ENST00000324685 URI1O94763 535 aaPredicted RBP24.43■■□□□ 1.5
RNF40-201ENST00000324685 KIF20AO95235 890 aa24.43■■□□□ 1.5
RNF40-201ENST00000324685 IFIT1P09914 478 aaKnown RBP24.42■■□□□ 1.5
RNF40-201ENST00000324685 LUZP1Q86V48 1076 aa24.42■■□□□ 1.5
RNF40-201ENST00000324685 CAVIN4Q5BKX8 364 aa24.42■■□□□ 1.5
RNF40-201ENST00000324685 ABCF2Q9UG63 623 aa24.42■■□□□ 1.5
RNF40-201ENST00000324685 NAPBQ9H115 298 aa24.42■■□□□ 1.5
RNF40-201ENST00000324685 DDX19AQ9NUU7 478 aaKnown RBP24.42■■□□□ 1.5
RNF40-201ENST00000324685 CTCFLQ8NI51 663 aaPredicted RBP24.41■■□□□ 1.5
RNF40-201ENST00000324685 YEATS4O95619 227 aa24.41■■□□□ 1.5
RNF40-201ENST00000324685 SF3B2Q13435 895 aaKnown RBP24.41■■□□□ 1.5
RNF40-201ENST00000324685 GSDMDP57764 484 aa24.41■■□□□ 1.5
RNF40-201ENST00000324685 LIMCH1Q9UPQ0 1083 aa24.41■■□□□ 1.5
RNF40-201ENST00000324685 GCOM1H8Y6P7 765 aaPredicted RBP24.41■■□□□ 1.5
RNF40-201ENST00000324685 MYZAPP0CAP1 466 aa24.41■■□□□ 1.5
RNF40-201ENST00000324685 TMEM266Q2M3C6 531 aa24.41■■□□□ 1.5
RNF40-201ENST00000324685 GIMAP7Q8NHV1 300 aa24.41■■□□□ 1.5
RNF40-201ENST00000324685 ZNF652Q9Y2D9 606 aa24.41■■□□□ 1.5
RNF40-201ENST00000324685 SMARCA5O60264 1052 aaPredicted RBP24.41■■□□□ 1.5
RNF40-201ENST00000324685 KLHL10Q6JEL2 608 aa24.41■■□□□ 1.5
RNF40-201ENST00000324685 POLR3DP05423 398 aaPredicted RBP24.4■■□□□ 1.5
RNF40-201ENST00000324685 PAFAH1B1P43034 410 aa24.4■■□□□ 1.5
RNF40-201ENST00000324685 CCDC178Q5BJE1 867 aa24.4■■□□□ 1.5
RNF40-201ENST00000324685 MICALCLQ6ZW33 695 aa24.4■■□□□ 1.5
RNF40-201ENST00000324685 RARSP54136 660 aaKnown RBP24.4■■□□□ 1.5
RNF40-201ENST00000324685 SUPT6HQ7KZ85 1726 aaKnown RBP24.4■■□□□ 1.5
RNF40-201ENST00000324685 SSRP1Q08945 709 aaKnown RBP24.39■■□□□ 1.5
RNF40-201ENST00000324685 PPP4R3AQ6IN85 833 aa24.39■■□□□ 1.5
RNF40-201ENST00000324685 MKNK2Q9HBH9 465 aa24.39■■□□□ 1.5
RNF40-201ENST00000324685 IFFO1Q0D2I5 559 aa24.39■■□□□ 1.5
RNF40-201ENST00000324685 BOLA2Q9H3K6 86 aa24.39■■□□□ 1.49
RNF40-201ENST00000324685 SLC12A7Q9Y666 1083 aa24.39■■□□□ 1.49
RNF40-201ENST00000324685 CCDC113Q9H0I3 377 aa24.39■■□□□ 1.49
RNF40-201ENST00000324685 NUP88Q99567 741 aaPredicted RBP24.38■■□□□ 1.49
RNF40-201ENST00000324685 MAP3K12Q12852 859 aa24.38■■□□□ 1.49
RNF40-201ENST00000324685 RNF41Q9H4P4 317 aaPredicted RBP24.38■■□□□ 1.49
RNF40-201ENST00000324685 ANKLE2Q86XL3 938 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms