RNA–Protein interactions for RNA: ENST00000320161.10

SGIP1-202, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 680 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-202ENST00000320161 WASHC2AQ641Q2 1341 aa11.53□□□□□ -0.56
SGIP1-202ENST00000320161 IGSF1Q8N6C5 1336 aa11.53□□□□□ -0.56
SGIP1-202ENST00000320161 HSP90AB1P08238 724 aaKnown RBP11.52□□□□□ -0.57
SGIP1-202ENST00000320161 NKX1-1Q15270 411 aaPredicted RBP11.52□□□□□ -0.57
SGIP1-202ENST00000320161 ZNF526Q8TF50 670 aaPredicted RBP11.52□□□□□ -0.57
SGIP1-202ENST00000320161 TIMELESSQ9UNS1 1208 aa11.52□□□□□ -0.57
SGIP1-202ENST00000320161 GOLGB1Q14789 3259 aaKnown RBP11.52□□□□□ -0.57
SGIP1-202ENST00000320161 CARD14Q9BXL6 1004 aa11.51□□□□□ -0.57
SGIP1-202ENST00000320161 SPINK5Q9NQ38 1064 aaPredicted RBP11.51□□□□□ -0.57
SGIP1-202ENST00000320161 TNNT2P45379 298 aaPredicted RBP11.5□□□□□ -0.57
SGIP1-202ENST00000320161 EYA1Q99502 592 aa11.5□□□□□ -0.57
SGIP1-202ENST00000320161 RTCBQ9Y3I0 505 aaKnown RBP11.5□□□□□ -0.57
SGIP1-202ENST00000320161 NCAPD2Q15021 1401 aa11.5□□□□□ -0.57
SGIP1-202ENST00000320161 N4BP2Q86UW6 1770 aaPredicted RBP11.49□□□□□ -0.57
SGIP1-202ENST00000320161 KIF13BQ9NQT8 1826 aa11.49□□□□□ -0.57
SGIP1-202ENST00000320161 PHKG2P15735 406 aa11.49□□□□□ -0.57
SGIP1-202ENST00000320161 TRAPPC3LQ5T215 181 aa11.49□□□□□ -0.57
SGIP1-202ENST00000320161 LINC00116Q8NCU8 138 aa11.49□□□□□ -0.57
SGIP1-202ENST00000320161 RBM42Q9BTD8 480 aaKnown RBP11.49□□□□□ -0.57
SGIP1-202ENST00000320161 WWC3Q9ULE0 1092 aa11.49□□□□□ -0.57
SGIP1-202ENST00000320161 ASAP1Q9ULH1 1129 aa11.49□□□□□ -0.57
SGIP1-202ENST00000320161 PLEKHG2Q9H7P9 1386 aa11.49□□□□□ -0.57
SGIP1-202ENST00000320161 ZNF831Q5JPB2 1677 aa11.49□□□□□ -0.57
SGIP1-202ENST00000320161 ERVV-2B6SEH9 535 aa11.48□□□□□ -0.57
SGIP1-202ENST00000320161 MMP10P09238 476 aa11.48□□□□□ -0.57
SGIP1-202ENST00000320161 RFC4P35249 363 aa11.48□□□□□ -0.57
SGIP1-202ENST00000320161 PLEKHO1Q53GL0 409 aaPredicted RBP11.48□□□□□ -0.57
SGIP1-202ENST00000320161 C1orf141Q5JVX7 400 aa11.48□□□□□ -0.57
SGIP1-202ENST00000320161 NLGN1Q8N2Q7 840 aa11.48□□□□□ -0.57
SGIP1-202ENST00000320161 POLKQ9UBT6 870 aa11.48□□□□□ -0.57
SGIP1-202ENST00000320161 COL5A3P25940 1745 aaPredicted RBP11.47□□□□□ -0.57
SGIP1-202ENST00000320161 CABP4P57796 275 aa11.47□□□□□ -0.57
SGIP1-202ENST00000320161 DCAF5Q96JK2 942 aa11.47□□□□□ -0.57
SGIP1-202ENST00000320161 CCDC87Q9NVE4 849 aa11.47□□□□□ -0.57
SGIP1-202ENST00000320161 CICQ96RK0 1608 aaPredicted RBP11.46□□□□□ -0.57
SGIP1-202ENST00000320161 TGFB2P61812 414 aa11.46□□□□□ -0.57
SGIP1-202ENST00000320161 EIF4A2Q14240 407 aaKnown RBP11.46□□□□□ -0.57
SGIP1-202ENST00000320161 AMOTQ4VCS5 1084 aa11.46□□□□□ -0.57
SGIP1-202ENST00000320161 ZNF530Q6P9A1 599 aaPredicted RBP11.46□□□□□ -0.57
SGIP1-202ENST00000320161 ATG3Q9NT62 314 aa11.46□□□□□ -0.57
SGIP1-202ENST00000320161 PARP3Q9Y6F1 533 aa11.46□□□□□ -0.57
SGIP1-202ENST00000320161 ADCY9O60503 1353 aa11.45□□□□□ -0.58
SGIP1-202ENST00000320161 CLSPNQ9HAW4 1339 aa11.45□□□□□ -0.58
SGIP1-202ENST00000320161 VIRMAQ69YN4 1812 aaKnown RBP11.45□□□□□ -0.58
SGIP1-202ENST00000320161 HSPA6P17066 643 aa11.45□□□□□ -0.58
SGIP1-202ENST00000320161 EIF4G2P78344 907 aaKnown RBP eCLIP11.45□□□□□ -0.58
SGIP1-202ENST00000320161 ITPK1Q13572 414 aa11.45□□□□□ -0.58
SGIP1-202ENST00000320161 BCS1LQ9Y276 419 aa11.45□□□□□ -0.58
SGIP1-202ENST00000320161 C4AP0C0L4 1744 aa11.45□□□□□ -0.58
SGIP1-202ENST00000320161 ARFGEF1Q9Y6D6 1849 aa11.44□□□□□ -0.58
SGIP1-202ENST00000320161 CAPN15O75808 1086 aa11.44□□□□□ -0.58
SGIP1-202ENST00000320161 MTHFSP49914 203 aa11.44□□□□□ -0.58
SGIP1-202ENST00000320161 RC3H1Q5TC82 1133 aaKnown RBP11.44□□□□□ -0.58
SGIP1-202ENST00000320161 ARHGAP27Q6ZUM4 889 aa11.44□□□□□ -0.58
SGIP1-202ENST00000320161 SMIM5Q71RC9 77 aa11.44□□□□□ -0.58
SGIP1-202ENST00000320161 MORC1Q86VD1 984 aa11.44□□□□□ -0.58
SGIP1-202ENST00000320161 AMIGO3Q86WK7 504 aa11.44□□□□□ -0.58
SGIP1-202ENST00000320161 PCGF6Q9BYE7 350 aa11.44□□□□□ -0.58
SGIP1-202ENST00000320161 SCN11AQ9UI33 1791 aa11.44□□□□□ -0.58
SGIP1-202ENST00000320161 CNTNAP4Q9C0A0 1308 aa11.43□□□□□ -0.58
SGIP1-202ENST00000320161 BRCA1P38398 1863 aaKnown RBP11.43□□□□□ -0.58
SGIP1-202ENST00000320161 C16orf71Q8IYS4 520 aaPredicted RBP11.43□□□□□ -0.58
SGIP1-202ENST00000320161 MYH14Q7Z406 1995 aaKnown RBP11.43□□□□□ -0.58
SGIP1-202ENST00000320161 A0A0G2JLW4 131 aa11.42□□□□□ -0.58
SGIP1-202ENST00000320161 RPS6KA4O75676 772 aa11.42□□□□□ -0.58
SGIP1-202ENST00000320161 FCHSD2O94868 740 aa11.42□□□□□ -0.58
SGIP1-202ENST00000320161 IFFO2Q5TF58 517 aa11.42□□□□□ -0.58
SGIP1-202ENST00000320161 ARHGEF1Q92888 912 aaKnown RBP11.42□□□□□ -0.58
SGIP1-202ENST00000320161 PXDNLA1KZ92 1463 aa11.42□□□□□ -0.58
SGIP1-202ENST00000320161 KDRP35968 1356 aa11.41□□□□□ -0.58
SGIP1-202ENST00000320161 PTCD1O75127 700 aaKnown RBP11.41□□□□□ -0.58
SGIP1-202ENST00000320161 PANK3Q9H999 370 aa11.41□□□□□ -0.58
SGIP1-202ENST00000320161 KNSTRNQ9Y448 316 aa11.41□□□□□ -0.58
SGIP1-202ENST00000320161 KIAA1551Q9HCM1 1747 aa11.4□□□□□ -0.58
SGIP1-202ENST00000320161 CEP350Q5VT06 3117 aa11.4□□□□□ -0.58
SGIP1-202ENST00000320161 APLP1P51693 650 aa11.4□□□□□ -0.58
SGIP1-202ENST00000320161 C10orf71Q711Q0 1435 aa11.4□□□□□ -0.58
SGIP1-202ENST00000320161 ZPR1O75312 459 aa11.39□□□□□ -0.59
SGIP1-202ENST00000320161 TOMM70O94826 608 aa11.39□□□□□ -0.59
SGIP1-202ENST00000320161 GYS1P13807 737 aa11.39□□□□□ -0.59
SGIP1-202ENST00000320161 NFATC2IPQ8NCF5 419 aa11.39□□□□□ -0.59
SGIP1-202ENST00000320161 PIM2Q9P1W9 311 aa11.39□□□□□ -0.59
SGIP1-202ENST00000320161 KDM6AO15550 1401 aaPredicted RBP11.38□□□□□ -0.59
SGIP1-202ENST00000320161 DPEP1P16444 411 aa11.38□□□□□ -0.59
SGIP1-202ENST00000320161 CRKLP46109 303 aaKnown RBP11.38□□□□□ -0.59
SGIP1-202ENST00000320161 DALRD3Q5D0E6 543 aaKnown RBP11.38□□□□□ -0.59
SGIP1-202ENST00000320161 SULT6B1Q6IMI4 303 aa11.38□□□□□ -0.59
SGIP1-202ENST00000320161 SBF1O95248 1867 aa11.38□□□□□ -0.59
SGIP1-202ENST00000320161 TJP1Q07157 1748 aa11.38□□□□□ -0.59
SGIP1-202ENST00000320161 KDM2BQ8NHM5 1336 aa11.37□□□□□ -0.59
SGIP1-202ENST00000320161 KIF3CO14782 793 aa11.37□□□□□ -0.59
SGIP1-202ENST00000320161 HSPA5P11021 654 aaKnown RBP11.37□□□□□ -0.59
SGIP1-202ENST00000320161 TNRC6CQ9HCJ0 1690 aaKnown RBP11.36□□□□□ -0.59
SGIP1-202ENST00000320161 USP42Q9H9J4 1324 aaKnown RBP11.36□□□□□ -0.59
SGIP1-202ENST00000320161 CCDC88AQ3V6T2 1871 aa11.36□□□□□ -0.59
SGIP1-202ENST00000320161 AKAP4Q5JQC9 854 aa11.36□□□□□ -0.59
SGIP1-202ENST00000320161 C9orf131Q5VYM1 1079 aa11.36□□□□□ -0.59
SGIP1-202ENST00000320161 CHRDL2Q6WN34 429 aa11.36□□□□□ -0.59
SGIP1-202ENST00000320161 SLC4A9Q96Q91 983 aa11.36□□□□□ -0.59
SGIP1-202ENST00000320161 WDR90Q96KV7 1748 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms