RNA–Protein interactions for RNA: ENST00000315732.2

LSM10-201, Transcript of LSM10, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM10, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10-201ENST00000315732 ZNF530Q6P9A1 599 aaPredicted RBP20.04■□□□□ 0.8
LSM10-201ENST00000315732 ITGB4P16144 1822 aa20.04■□□□□ 0.8
LSM10-201ENST00000315732 KIF7Q2M1P5 1343 aa20.03■□□□□ 0.8
LSM10-201ENST00000315732 GRIN3BO60391 1043 aa20.03■□□□□ 0.8
LSM10-201ENST00000315732 IL13P35225 146 aa20.03■□□□□ 0.8
LSM10-201ENST00000315732 SULT6B1Q6IMI4 303 aa20.03■□□□□ 0.8
LSM10-201ENST00000315732 SMIM5Q71RC9 77 aa20.03■□□□□ 0.8
LSM10-201ENST00000315732 MTHFSP49914 203 aa20.02■□□□□ 0.8
LSM10-201ENST00000315732 C1orf141Q5JVX7 400 aa20.02■□□□□ 0.8
LSM10-201ENST00000315732 AEBP1Q8IUX7 1158 aa20.02■□□□□ 0.8
LSM10-201ENST00000315732 C4BP0C0L5 1744 aa20.02■□□□□ 0.79
LSM10-201ENST00000315732 GNPATO15228 680 aa20.01■□□□□ 0.79
LSM10-201ENST00000315732 CABP4P57796 275 aa20.01■□□□□ 0.79
LSM10-201ENST00000315732 RBM42Q9BTD8 480 aaKnown RBP20■□□□□ 0.79
LSM10-201ENST00000315732 PER1O15534 1290 aaPredicted RBP19.99■□□□□ 0.79
LSM10-201ENST00000315732 TAF1LQ8IZX4 1826 aa19.99■□□□□ 0.79
LSM10-201ENST00000315732 YBX3P16989 372 aaKnown RBP eCLIP19.98■□□□□ 0.79
LSM10-201ENST00000315732 TRAPPC3LQ5T215 181 aa19.98■□□□□ 0.79
LSM10-201ENST00000315732 RC3H1Q5TC82 1133 aaKnown RBP19.98■□□□□ 0.79
LSM10-201ENST00000315732 SLC4A9Q96Q91 983 aa19.98■□□□□ 0.79
LSM10-201ENST00000315732 RTCBQ9Y3I0 505 aaKnown RBP19.98■□□□□ 0.79
LSM10-201ENST00000315732 KDRP35968 1356 aa19.97■□□□□ 0.79
LSM10-201ENST00000315732 NFATC2IPQ8NCF5 419 aa19.96■□□□□ 0.79
LSM10-201ENST00000315732 KDM6AO15550 1401 aaPredicted RBP19.95■□□□□ 0.78
LSM10-201ENST00000315732 ADRA2BP18089 450 aa19.94■□□□□ 0.78
LSM10-201ENST00000315732 AKAP4Q5JQC9 854 aa19.94■□□□□ 0.78
LSM10-201ENST00000315732 PTCD1O75127 700 aaKnown RBP19.93■□□□□ 0.78
LSM10-201ENST00000315732 CC2D1BQ5T0F9 858 aaKnown RBP19.93■□□□□ 0.78
LSM10-201ENST00000315732 NLGN1Q8N2Q7 840 aa19.93■□□□□ 0.78
LSM10-201ENST00000315732 CNTNAP4Q9C0A0 1308 aa19.93■□□□□ 0.78
LSM10-201ENST00000315732 CHD4Q14839 1912 aa19.92■□□□□ 0.78
LSM10-201ENST00000315732 RPS6KA4O75676 772 aa19.92■□□□□ 0.78
LSM10-201ENST00000315732 ARHGEF1Q92888 912 aaKnown RBP19.92■□□□□ 0.78
LSM10-201ENST00000315732 UBR3Q6ZT12 1888 aa19.92■□□□□ 0.78
LSM10-201ENST00000315732 DIAPH1O60610 1272 aaKnown RBP19.91■□□□□ 0.78
LSM10-201ENST00000315732 MMP10P09238 476 aa19.91■□□□□ 0.78
LSM10-201ENST00000315732 RFC4P35249 363 aa19.91■□□□□ 0.78
LSM10-201ENST00000315732 HMOX1P09601 288 aa19.9■□□□□ 0.78
LSM10-201ENST00000315732 SLC52A2Q9HAB3 445 aa19.88■□□□□ 0.77
LSM10-201ENST00000315732 LGR6Q9HBX8 967 aa19.88■□□□□ 0.77
LSM10-201ENST00000315732 NPC1L1Q9UHC9 1359 aa19.87■□□□□ 0.77
LSM10-201ENST00000315732 GYS1P13807 737 aa19.87■□□□□ 0.77
LSM10-201ENST00000315732 CRKLP46109 303 aaKnown RBP19.87■□□□□ 0.77
LSM10-201ENST00000315732 C1QTNF8P60827 252 aa19.87■□□□□ 0.77
LSM10-201ENST00000315732 RNMTO43148 476 aaKnown RBP19.86■□□□□ 0.77
LSM10-201ENST00000315732 MTHFSDQ2M296 383 aaKnown RBP19.86■□□□□ 0.77
LSM10-201ENST00000315732 ZNF831Q5JPB2 1677 aa19.86■□□□□ 0.77
LSM10-201ENST00000315732 TGFB2P61812 414 aa19.85■□□□□ 0.77
LSM10-201ENST00000315732 GIGYF1O75420 1035 aaPredicted RBP19.84■□□□□ 0.77
LSM10-201ENST00000315732 CNGB1Q14028 1251 aaPredicted RBP19.84■□□□□ 0.77
LSM10-201ENST00000315732 PARP3Q9Y6F1 533 aa19.84■□□□□ 0.77
LSM10-201ENST00000315732 CCDC87Q9NVE4 849 aa19.83■□□□□ 0.77
LSM10-201ENST00000315732 WWC3Q9ULE0 1092 aa19.83■□□□□ 0.77
LSM10-201ENST00000315732 INTS5Q6P9B9 1019 aaKnown RBP19.82■□□□□ 0.76
LSM10-201ENST00000315732 U2SURPO15042 1029 aaKnown RBP19.81■□□□□ 0.76
LSM10-201ENST00000315732 SLC39A6Q13433 755 aa19.81■□□□□ 0.76
LSM10-201ENST00000315732 A0A0G2JLW4 131 aa19.8■□□□□ 0.76
LSM10-201ENST00000315732 DNAJC10Q8IXB1 793 aa19.8■□□□□ 0.76
LSM10-201ENST00000315732 CYP19A1P11511 503 aaPredicted RBP19.79■□□□□ 0.76
LSM10-201ENST00000315732 SRP68Q9UHB9 627 aaKnown RBP19.79■□□□□ 0.76
LSM10-201ENST00000315732 USP42Q9H9J4 1324 aaKnown RBP19.78■□□□□ 0.76
LSM10-201ENST00000315732 FKBP8Q14318 412 aa19.78■□□□□ 0.76
LSM10-201ENST00000315732 VSIG10Q8N0Z9 540 aa19.78■□□□□ 0.76
LSM10-201ENST00000315732 GAS2L2Q8NHY3 880 aa19.78■□□□□ 0.76
LSM10-201ENST00000315732 COL5A3P25940 1745 aaPredicted RBP19.77■□□□□ 0.76
LSM10-201ENST00000315732 SENP3-EIF4A1A0A087X0R7 540 aa19.77■□□□□ 0.76
LSM10-201ENST00000315732 ZPR1O75312 459 aa19.77■□□□□ 0.76
LSM10-201ENST00000315732 PXDNLA1KZ92 1463 aa19.77■□□□□ 0.76
LSM10-201ENST00000315732 C10orf71Q711Q0 1435 aa19.76■□□□□ 0.75
LSM10-201ENST00000315732 ATP10DQ9P241 1426 aa19.76■□□□□ 0.75
LSM10-201ENST00000315732 GNAT3A8MTJ3 354 aa19.76■□□□□ 0.75
LSM10-201ENST00000315732 DPEP1P16444 411 aa19.76■□□□□ 0.75
LSM10-201ENST00000315732 CFAP53Q96M91 514 aa19.76■□□□□ 0.75
LSM10-201ENST00000315732 GPBP1L1Q9HC44 474 aaPredicted RBP19.76■□□□□ 0.75
LSM10-201ENST00000315732 BCS1LQ9Y276 419 aa19.76■□□□□ 0.75
LSM10-201ENST00000315732 CICQ96RK0 1608 aaPredicted RBP19.76■□□□□ 0.75
LSM10-201ENST00000315732 SCN11AQ9UI33 1791 aa19.75■□□□□ 0.75
LSM10-201ENST00000315732 MRC1P22897 1456 aa19.75■□□□□ 0.75
LSM10-201ENST00000315732 TM4SF1P30408 202 aa19.75■□□□□ 0.75
LSM10-201ENST00000315732 MYH14Q7Z406 1995 aaKnown RBP19.75■□□□□ 0.75
LSM10-201ENST00000315732 SOS1Q07889 1333 aaPredicted RBP19.75■□□□□ 0.75
LSM10-201ENST00000315732 ADCY9O60503 1353 aa19.74■□□□□ 0.75
LSM10-201ENST00000315732 TEFQ10587 303 aa19.74■□□□□ 0.75
LSM10-201ENST00000315732 USPL1Q5W0Q7 1092 aa19.74■□□□□ 0.75
LSM10-201ENST00000315732 TTC5Q8N0Z6 440 aa19.74■□□□□ 0.75
LSM10-201ENST00000315732 IL17REQ8NFR9 667 aa19.74■□□□□ 0.75
LSM10-201ENST00000315732 COL3A1P02461 1466 aaPredicted RBP19.73■□□□□ 0.75
LSM10-201ENST00000315732 FCHSD2O94868 740 aa19.73■□□□□ 0.75
LSM10-201ENST00000315732 STARD3NLO95772 234 aa19.73■□□□□ 0.75
LSM10-201ENST00000315732 DDR1Q08345 913 aa19.73■□□□□ 0.75
LSM10-201ENST00000315732 NUDCQ9Y266 331 aa19.73■□□□□ 0.75
LSM10-201ENST00000315732 KCNA3P22001 575 aa19.72■□□□□ 0.75
LSM10-201ENST00000315732 ARHGAP27Q6ZUM4 889 aa19.72■□□□□ 0.75
LSM10-201ENST00000315732 PIM2Q9P1W9 311 aa19.72■□□□□ 0.75
LSM10-201ENST00000315732 NARFQ9UHQ1 456 aa19.72■□□□□ 0.75
LSM10-201ENST00000315732 C4AP0C0L4 1744 aa19.71■□□□□ 0.75
LSM10-201ENST00000315732 POLRMTO00411 1230 aaKnown RBP19.71■□□□□ 0.75
LSM10-201ENST00000315732 ZNF790Q6PG37 636 aa19.71■□□□□ 0.75
LSM10-201ENST00000315732 ZNF526Q8TF50 670 aaPredicted RBP19.71■□□□□ 0.75
LSM10-201ENST00000315732 TEX13AQ9BXU3 409 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms