RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 FLAD1Q8NFF5 587 aa11.18□□□□□ -0.62
TPM3-203ENST00000312970 PIGBQ92521 554 aa11.18□□□□□ -0.62
TPM3-203ENST00000312970 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.18□□□□□ -0.62
TPM3-203ENST00000312970 NCAPD2Q15021 1401 aa11.18□□□□□ -0.62
TPM3-203ENST00000312970 PALLDQ8WX93 1383 aa11.17□□□□□ -0.62
TPM3-203ENST00000312970 EIF4A2Q14240 407 aaKnown RBP11.17□□□□□ -0.62
TPM3-203ENST00000312970 IFNL2Q8IZJ0 200 aa11.17□□□□□ -0.62
TPM3-203ENST00000312970 ITGB4P16144 1822 aa11.16□□□□□ -0.62
TPM3-203ENST00000312970 PHKG2P15735 406 aa11.15□□□□□ -0.62
TPM3-203ENST00000312970 HSPA6P17066 643 aa11.15□□□□□ -0.62
TPM3-203ENST00000312970 MORC1Q86VD1 984 aa11.15□□□□□ -0.62
TPM3-203ENST00000312970 TMOD3Q9NYL9 352 aa11.15□□□□□ -0.62
TPM3-203ENST00000312970 ATP10DQ9P241 1426 aa11.15□□□□□ -0.62
TPM3-203ENST00000312970 PKD1L3Q7Z443 1732 aa11.15□□□□□ -0.63
TPM3-203ENST00000312970 ANKRD26Q9UPS8 1709 aa11.15□□□□□ -0.63
TPM3-203ENST00000312970 TOGARAM1Q9Y4F4 1720 aa11.15□□□□□ -0.63
TPM3-203ENST00000312970 GRIN3BO60391 1043 aa11.14□□□□□ -0.63
TPM3-203ENST00000312970 HOXD11P31277 338 aaPredicted RBP11.14□□□□□ -0.63
TPM3-203ENST00000312970 AK7Q96M32 723 aa11.14□□□□□ -0.63
TPM3-203ENST00000312970 KNSTRNQ9Y448 316 aa11.14□□□□□ -0.63
TPM3-203ENST00000312970 LOC102724428A0A0B4J2F2 783 aa11.13□□□□□ -0.63
TPM3-203ENST00000312970 SIK1P57059 783 aa11.13□□□□□ -0.63
TPM3-203ENST00000312970 PLEKHO1Q53GL0 409 aaPredicted RBP11.13□□□□□ -0.63
TPM3-203ENST00000312970 MSL1Q68DK7 614 aa11.13□□□□□ -0.63
TPM3-203ENST00000312970 ASAP1Q9ULH1 1129 aa11.13□□□□□ -0.63
TPM3-203ENST00000312970 PLEKHG2Q9H7P9 1386 aa11.13□□□□□ -0.63
TPM3-203ENST00000312970 C4BP0C0L5 1744 aa11.12□□□□□ -0.63
TPM3-203ENST00000312970 IGSF1Q8N6C5 1336 aa11.12□□□□□ -0.63
TPM3-203ENST00000312970 ERVV-2B6SEH9 535 aa11.12□□□□□ -0.63
TPM3-203ENST00000312970 HSP90AB1P08238 724 aaKnown RBP11.12□□□□□ -0.63
TPM3-203ENST00000312970 ATP6V1AP38606 617 aa11.12□□□□□ -0.63
TPM3-203ENST00000312970 AMOTQ4VCS5 1084 aa11.12□□□□□ -0.63
TPM3-203ENST00000312970 ZNF526Q8TF50 670 aaPredicted RBP11.12□□□□□ -0.63
TPM3-203ENST00000312970 GPBP1L1Q9HC44 474 aaPredicted RBP11.12□□□□□ -0.63
TPM3-203ENST00000312970 ATG3Q9NT62 314 aa11.12□□□□□ -0.63
TPM3-203ENST00000312970 UBR3Q6ZT12 1888 aa11.12□□□□□ -0.63
TPM3-203ENST00000312970 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.11□□□□□ -0.63
TPM3-203ENST00000312970 PHF14O94880 888 aa11.11□□□□□ -0.63
TPM3-203ENST00000312970 DCAF5Q96JK2 942 aa11.11□□□□□ -0.63
TPM3-203ENST00000312970 CD2APQ9Y5K6 639 aa11.11□□□□□ -0.63
TPM3-203ENST00000312970 SSFA2P28290 1259 aa11.1□□□□□ -0.63
TPM3-203ENST00000312970 ITPK1Q13572 414 aa11.1□□□□□ -0.63
TPM3-203ENST00000312970 ERICH6Q7L0X2 663 aa11.1□□□□□ -0.63
TPM3-203ENST00000312970 AMIGO3Q86WK7 504 aa11.1□□□□□ -0.63
TPM3-203ENST00000312970 LINC00116Q8NCU8 138 aa11.1□□□□□ -0.63
TPM3-203ENST00000312970 MTHFSP49914 203 aa11.09□□□□□ -0.63
TPM3-203ENST00000312970 ZNF530Q6P9A1 599 aaPredicted RBP11.09□□□□□ -0.63
TPM3-203ENST00000312970 SMIM5Q71RC9 77 aa11.09□□□□□ -0.63
TPM3-203ENST00000312970 GNPATO15228 680 aa11.08□□□□□ -0.64
TPM3-203ENST00000312970 IL13P35225 146 aa11.08□□□□□ -0.64
TPM3-203ENST00000312970 VASPP50552 380 aaPredicted RBP11.08□□□□□ -0.64
TPM3-203ENST00000312970 CABP4P57796 275 aa11.08□□□□□ -0.64
TPM3-203ENST00000312970 C1orf141Q5JVX7 400 aa11.08□□□□□ -0.64
TPM3-203ENST00000312970 SULT6B1Q6IMI4 303 aa11.08□□□□□ -0.64
TPM3-203ENST00000312970 DNAJC5GQ8N7S2 189 aa11.08□□□□□ -0.64
TPM3-203ENST00000312970 RBM42Q9BTD8 480 aaKnown RBP11.08□□□□□ -0.64
TPM3-203ENST00000312970 GTF3C3Q9Y5Q9 886 aa11.08□□□□□ -0.64
TPM3-203ENST00000312970 ADCY9O60503 1353 aa11.07□□□□□ -0.64
TPM3-203ENST00000312970 TRAPPC3LQ5T215 181 aa11.07□□□□□ -0.64
TPM3-203ENST00000312970 RC3H1Q5TC82 1133 aaKnown RBP11.07□□□□□ -0.64
TPM3-203ENST00000312970 PAXIP1Q6ZW49 1069 aaPredicted RBP11.07□□□□□ -0.64
TPM3-203ENST00000312970 AEBP1Q8IUX7 1158 aa11.07□□□□□ -0.64
TPM3-203ENST00000312970 CFAP44Q96MT7 982 aa11.07□□□□□ -0.64
TPM3-203ENST00000312970 KIF7Q2M1P5 1343 aa11.07□□□□□ -0.64
TPM3-203ENST00000312970 KIF3CO14782 793 aa11.06□□□□□ -0.64
TPM3-203ENST00000312970 NFATC2IPQ8NCF5 419 aa11.06□□□□□ -0.64
TPM3-203ENST00000312970 BBXQ8WY36 941 aaPredicted RBP11.06□□□□□ -0.64
TPM3-203ENST00000312970 SLC4A9Q96Q91 983 aa11.06□□□□□ -0.64
TPM3-203ENST00000312970 RTCBQ9Y3I0 505 aaKnown RBP11.06□□□□□ -0.64
TPM3-203ENST00000312970 PER1O15534 1290 aaPredicted RBP11.05□□□□□ -0.64
TPM3-203ENST00000312970 PTCD1O75127 700 aaKnown RBP11.04□□□□□ -0.64
TPM3-203ENST00000312970 RPS6KA4O75676 772 aa11.04□□□□□ -0.64
TPM3-203ENST00000312970 AKAP4Q5JQC9 854 aa11.04□□□□□ -0.64
TPM3-203ENST00000312970 NLGN1Q8N2Q7 840 aa11.04□□□□□ -0.64
TPM3-203ENST00000312970 ARHGEF1Q92888 912 aaKnown RBP11.04□□□□□ -0.64
TPM3-203ENST00000312970 WWC3Q9ULE0 1092 aa11.04□□□□□ -0.64
TPM3-203ENST00000312970 KDRP35968 1356 aa11.03□□□□□ -0.64
TPM3-203ENST00000312970 KDM6AO15550 1401 aaPredicted RBP11.03□□□□□ -0.64
TPM3-203ENST00000312970 MMP10P09238 476 aa11.03□□□□□ -0.64
TPM3-203ENST00000312970 RFC4P35249 363 aa11.03□□□□□ -0.64
TPM3-203ENST00000312970 CC2D1BQ5T0F9 858 aaKnown RBP11.03□□□□□ -0.64
TPM3-203ENST00000312970 CNTNAP4Q9C0A0 1308 aa11.03□□□□□ -0.64
TPM3-203ENST00000312970 KIF13BQ9NQT8 1826 aa11.02□□□□□ -0.64
TPM3-203ENST00000312970 DIAPH1O60610 1272 aaKnown RBP11.02□□□□□ -0.65
TPM3-203ENST00000312970 APLP1P51693 650 aa11.02□□□□□ -0.65
TPM3-203ENST00000312970 COL13A1Q5TAT6 717 aaPredicted RBP11.02□□□□□ -0.65
TPM3-203ENST00000312970 ZNF831Q5JPB2 1677 aa11.01□□□□□ -0.65
TPM3-203ENST00000312970 COL5A3P25940 1745 aaPredicted RBP11.01□□□□□ -0.65
TPM3-203ENST00000312970 KIAA1551Q9HCM1 1747 aa11.01□□□□□ -0.65
TPM3-203ENST00000312970 HMOX1P09601 288 aa11.01□□□□□ -0.65
TPM3-203ENST00000312970 SLC52A2Q9HAB3 445 aa11.01□□□□□ -0.65
TPM3-203ENST00000312970 LGR6Q9HBX8 967 aa11.01□□□□□ -0.65
TPM3-203ENST00000312970 N4BP2Q86UW6 1770 aaPredicted RBP11□□□□□ -0.65
TPM3-203ENST00000312970 CICQ96RK0 1608 aaPredicted RBP11□□□□□ -0.65
TPM3-203ENST00000312970 RNMTO43148 476 aaKnown RBP11□□□□□ -0.65
TPM3-203ENST00000312970 GYS1P13807 737 aa11□□□□□ -0.65
TPM3-203ENST00000312970 CRKLP46109 303 aaKnown RBP11□□□□□ -0.65
TPM3-203ENST00000312970 TGFB2P61812 414 aa11□□□□□ -0.65
TPM3-203ENST00000312970 HOMEZQ8IX15 550 aa11□□□□□ -0.65
TPM3-203ENST00000312970 CAPN15O75808 1086 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms