RNA–Protein interactions for RNA: ENST00000308249.3

PPM1E-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1E, Length 6,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1E-201ENST00000308249 MAATS1Q7Z4T9 603 aa18.38■□□□□ 0.53
PPM1E-201ENST00000308249 CCDC82Q8N4S0 544 aa18.38■□□□□ 0.53
PPM1E-201ENST00000308249 FBF1Q8TES7 1133 aa18.38■□□□□ 0.53
PPM1E-201ENST00000308249 BCAR3O75815 825 aa18.38■□□□□ 0.53
PPM1E-201ENST00000308249 SFPQP23246 707 aaKnown RBP eCLIP18.38■□□□□ 0.53
PPM1E-201ENST00000308249 FERMT3Q86UX7 667 aa18.38■□□□□ 0.53
PPM1E-201ENST00000308249 MTHFSP49914 203 aa18.38■□□□□ 0.53
PPM1E-201ENST00000308249 CTNNA3Q9UI47 895 aa18.38■□□□□ 0.53
PPM1E-201ENST00000308249 WDHD1O75717 1129 aaPredicted RBP18.37■□□□□ 0.53
PPM1E-201ENST00000308249 MAP3K11Q16584 847 aa18.37■□□□□ 0.53
PPM1E-201ENST00000308249 GCC1Q96CN9 775 aa18.37■□□□□ 0.53
PPM1E-201ENST00000308249 MKNK2Q9HBH9 465 aa18.37■□□□□ 0.53
PPM1E-201ENST00000308249 ZSCAN12O43309 604 aa18.37■□□□□ 0.53
PPM1E-201ENST00000308249 GPRASP1Q5JY77 1395 aa18.37■□□□□ 0.53
PPM1E-201ENST00000308249 MXRA7P84157 204 aa18.37■□□□□ 0.53
PPM1E-201ENST00000308249 SYCE3A1L190 88 aa18.37■□□□□ 0.53
PPM1E-201ENST00000308249 TAOK3Q9H2K8 898 aa18.37■□□□□ 0.53
PPM1E-201ENST00000308249 IL1RAPL2Q9NP60 686 aa18.36■□□□□ 0.53
PPM1E-201ENST00000308249 TRMT1Q9NXH9 659 aaKnown RBP18.36■□□□□ 0.53
PPM1E-201ENST00000308249 GTF2F1P35269 517 aaKnown RBP eCLIP18.36■□□□□ 0.53
PPM1E-201ENST00000308249 GIGYF2Q6Y7W6 1299 aaKnown RBP18.36■□□□□ 0.53
PPM1E-201ENST00000308249 TSR2Q969E8 191 aaKnown RBP18.36■□□□□ 0.53
PPM1E-201ENST00000308249 TOP1P11387 765 aaKnown RBP18.36■□□□□ 0.53
PPM1E-201ENST00000308249 TMEM132EQ6IEE7 984 aa18.36■□□□□ 0.53
PPM1E-201ENST00000308249 CEP126Q9P2H0 1117 aa18.36■□□□□ 0.53
PPM1E-201ENST00000308249 SOGA1O94964 1423 aa18.36■□□□□ 0.53
PPM1E-201ENST00000308249 CYB5RLQ6IPT4 315 aa18.36■□□□□ 0.53
PPM1E-201ENST00000308249 GUCY1B3Q02153 619 aa18.35■□□□□ 0.53
PPM1E-201ENST00000308249 TCERG1LQ5VWI1 586 aa18.35■□□□□ 0.53
PPM1E-201ENST00000308249 PAIP2Q9BPZ3 127 aaKnown RBP18.35■□□□□ 0.53
PPM1E-201ENST00000308249 USO1O60763 962 aaKnown RBP18.35■□□□□ 0.53
PPM1E-201ENST00000308249 CASTP20810 708 aaKnown RBP18.35■□□□□ 0.53
PPM1E-201ENST00000308249 DAAM2Q86T65 1068 aa18.35■□□□□ 0.53
PPM1E-201ENST00000308249 PRC1O43663 620 aa18.35■□□□□ 0.53
PPM1E-201ENST00000308249 SRCIN1Q9C0H9 1055 aa18.35■□□□□ 0.53
PPM1E-201ENST00000308249 IGHMBP2P38935 993 aaKnown RBP18.35■□□□□ 0.53
PPM1E-201ENST00000308249 NOP2P46087 812 aaKnown RBP18.35■□□□□ 0.53
PPM1E-201ENST00000308249 TCP11L2Q8N4U5 519 aa18.35■□□□□ 0.53
PPM1E-201ENST00000308249 CTR9Q6PD62 1173 aa18.35■□□□□ 0.53
PPM1E-201ENST00000308249 MMRN2Q9H8L6 949 aa18.35■□□□□ 0.53
PPM1E-201ENST00000308249 PPP6R1Q9UPN7 881 aa18.35■□□□□ 0.53
PPM1E-201ENST00000308249 PRKCSHP14314 528 aaPredicted RBP18.34■□□□□ 0.53
PPM1E-201ENST00000308249 PSMC4P43686 418 aa18.34■□□□□ 0.53
PPM1E-201ENST00000308249 OTUD6BQ8N6M0 293 aa18.34■□□□□ 0.53
PPM1E-201ENST00000308249 SMARCC1Q92922 1105 aaPredicted RBP18.34■□□□□ 0.53
PPM1E-201ENST00000308249 IKBKGQ9Y6K9 419 aa18.34■□□□□ 0.53
PPM1E-201ENST00000308249 ADAMTS8Q9UP79 889 aa18.34■□□□□ 0.53
PPM1E-201ENST00000308249 ZNF219Q9P2Y4 722 aaPredicted RBP18.34■□□□□ 0.53
PPM1E-201ENST00000308249 MCM3P25205 808 aa18.33■□□□□ 0.53
PPM1E-201ENST00000308249 AAMPQ13685 434 aa18.33■□□□□ 0.53
PPM1E-201ENST00000308249 CUL5Q93034 780 aa18.33■□□□□ 0.53
PPM1E-201ENST00000308249 SMG6Q86US8 1419 aaKnown RBP18.33■□□□□ 0.53
PPM1E-201ENST00000308249 VPS8Q8N3P4 1428 aa18.33■□□□□ 0.53
PPM1E-201ENST00000308249 MIA2Q96PC5 1412 aa18.33■□□□□ 0.53
PPM1E-201ENST00000308249 SRGAP3O43295 1099 aa18.33■□□□□ 0.52
PPM1E-201ENST00000308249 SPECC1LQ69YQ0 1117 aa18.33■□□□□ 0.52
PPM1E-201ENST00000308249 RGS22Q8NE09 1264 aa18.33■□□□□ 0.52
PPM1E-201ENST00000308249 CDCA7LQ96GN5 454 aa18.33■□□□□ 0.52
PPM1E-201ENST00000308249 A0A1W2PRG0 241 aa18.33■□□□□ 0.52
PPM1E-201ENST00000308249 CGNQ9P2M7 1197 aaKnown RBP18.33■□□□□ 0.52
PPM1E-201ENST00000308249 ZSCAN31Q96LW9 406 aaPredicted RBP18.32■□□□□ 0.52
PPM1E-201ENST00000308249 KIF18AQ8NI77 898 aa18.32■□□□□ 0.52
PPM1E-201ENST00000308249 CCDC83Q8IWF9 413 aa18.32■□□□□ 0.52
PPM1E-201ENST00000308249 DHX57Q6P158 1386 aaKnown RBP18.32■□□□□ 0.52
PPM1E-201ENST00000308249 CCDC6Q16204 474 aa18.32■□□□□ 0.52
PPM1E-201ENST00000308249 NDC80O14777 642 aa18.31■□□□□ 0.52
PPM1E-201ENST00000308249 CCT4P50991 539 aaKnown RBP18.31■□□□□ 0.52
PPM1E-201ENST00000308249 NUTM1Q86Y26 1132 aa18.31■□□□□ 0.52
PPM1E-201ENST00000308249 TDRD9Q8NDG6 1382 aaKnown RBP18.31■□□□□ 0.52
PPM1E-201ENST00000308249 TERF1P54274 439 aa18.31■□□□□ 0.52
PPM1E-201ENST00000308249 MTIF2P46199 727 aaKnown RBP18.31■□□□□ 0.52
PPM1E-201ENST00000308249 PIP4K2BP78356 416 aa18.31■□□□□ 0.52
PPM1E-201ENST00000308249 ACTN2P35609 894 aa18.31■□□□□ 0.52
PPM1E-201ENST00000308249 ZNF530Q6P9A1 599 aaPredicted RBP18.31■□□□□ 0.52
PPM1E-201ENST00000308249 ZNF526Q8TF50 670 aaPredicted RBP18.31■□□□□ 0.52
PPM1E-201ENST00000308249 MYO1BO43795 1136 aa18.3■□□□□ 0.52
PPM1E-201ENST00000308249 CFAP58Q5T655 872 aa18.3■□□□□ 0.52
PPM1E-201ENST00000308249 PROSER2Q86WR7 435 aaPredicted RBP18.3■□□□□ 0.52
PPM1E-201ENST00000308249 FERMT1Q9BQL6 677 aa18.3■□□□□ 0.52
PPM1E-201ENST00000308249 YEATS4O95619 227 aa18.3■□□□□ 0.52
PPM1E-201ENST00000308249 NAP1L3Q99457 506 aaPredicted RBP18.3■□□□□ 0.52
PPM1E-201ENST00000308249 FGFR1OPO95684 399 aaKnown RBP18.3■□□□□ 0.52
PPM1E-201ENST00000308249 TMEM266Q2M3C6 531 aa18.3■□□□□ 0.52
PPM1E-201ENST00000308249 RANBP6O60518 1105 aaKnown RBP18.3■□□□□ 0.52
PPM1E-201ENST00000308249 METTL24Q5JXM2 366 aa18.3■□□□□ 0.52
PPM1E-201ENST00000308249 CCDC40Q4G0X9 1142 aa18.29■□□□□ 0.52
PPM1E-201ENST00000308249 ESPNB1AK53 854 aa18.29■□□□□ 0.52
PPM1E-201ENST00000308249 NAA15Q9BXJ9 866 aaKnown RBP18.29■□□□□ 0.52
PPM1E-201ENST00000308249 SULT6B1Q6IMI4 303 aa18.29■□□□□ 0.52
PPM1E-201ENST00000308249 SYCP3Q8IZU3 236 aa18.29■□□□□ 0.52
PPM1E-201ENST00000308249 CLIP2Q9UDT6 1046 aa18.29■□□□□ 0.52
PPM1E-201ENST00000308249 ALS2CR12Q96Q35 445 aa18.29■□□□□ 0.52
PPM1E-201ENST00000308249 TPD52P55327 224 aaPredicted RBP18.28■□□□□ 0.52
PPM1E-201ENST00000308249 KRT32Q14532 448 aa18.28■□□□□ 0.52
PPM1E-201ENST00000308249 ZNF287Q9HBT7 754 aa18.28■□□□□ 0.52
PPM1E-201ENST00000308249 ANKIB1Q9P2G1 1089 aa18.28■□□□□ 0.52
PPM1E-201ENST00000308249 CCDC18Q5T9S5 1454 aa18.28■□□□□ 0.52
PPM1E-201ENST00000308249 SH3BP5O60239 455 aa18.28■□□□□ 0.52
PPM1E-201ENST00000308249 ZSWIM4Q9H7M6 989 aa18.28■□□□□ 0.52
PPM1E-201ENST00000308249 SAMM50Q9Y512 469 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms