RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 HSPA1LP34931 641 aa20■□□□□ 0.79
HERPUD1-201ENST00000300302 KDM3BQ7LBC6 1761 aa19.99■□□□□ 0.79
HERPUD1-201ENST00000300302 HSP90AB1P08238 724 aaKnown RBP19.99■□□□□ 0.79
HERPUD1-201ENST00000300302 TMEM57Q8N5G2 664 aa19.99■□□□□ 0.79
HERPUD1-201ENST00000300302 CHMP4AQ9BY43 222 aa19.99■□□□□ 0.79
HERPUD1-201ENST00000300302 STK31Q9BXU1 1019 aa19.99■□□□□ 0.79
HERPUD1-201ENST00000300302 CHMP4BQ9H444 224 aaKnown RBP19.99■□□□□ 0.79
HERPUD1-201ENST00000300302 BTG4Q9NY30 223 aa19.99■□□□□ 0.79
HERPUD1-201ENST00000300302 CCDC30Q5VVM6 783 aa19.98■□□□□ 0.79
HERPUD1-201ENST00000300302 LARP1Q6PKG0 1096 aaKnown RBP19.98■□□□□ 0.79
HERPUD1-201ENST00000300302 PTPRCP08575 1304 aa19.98■□□□□ 0.79
HERPUD1-201ENST00000300302 KDM2BQ8NHM5 1336 aa19.98■□□□□ 0.79
HERPUD1-201ENST00000300302 JCADQ9P266 1359 aa19.98■□□□□ 0.79
HERPUD1-201ENST00000300302 IL2RBP14784 551 aa19.97■□□□□ 0.79
HERPUD1-201ENST00000300302 SCN11AQ9UI33 1791 aa19.97■□□□□ 0.79
HERPUD1-201ENST00000300302 SLC4A2P04920 1241 aa19.96■□□□□ 0.79
HERPUD1-201ENST00000300302 HOXB7P09629 217 aa19.96■□□□□ 0.79
HERPUD1-201ENST00000300302 DCAF5Q96JK2 942 aa19.96■□□□□ 0.79
HERPUD1-201ENST00000300302 ABCC4O15439 1325 aa19.96■□□□□ 0.79
HERPUD1-201ENST00000300302 EIF4A1P60842 406 aaKnown RBP19.96■□□□□ 0.79
HERPUD1-201ENST00000300302 SIPA1L3O60292 1781 aaPredicted RBP19.95■□□□□ 0.78
HERPUD1-201ENST00000300302 ZCRB1Q8TBF4 217 aaKnown RBP19.95■□□□□ 0.78
HERPUD1-201ENST00000300302 TSHZ2Q9NRE2 1034 aa19.95■□□□□ 0.78
HERPUD1-201ENST00000300302 PCDH11XQ9BZA7 1347 aa19.95■□□□□ 0.78
HERPUD1-201ENST00000300302 PCDH11YQ9BZA8 1340 aa19.95■□□□□ 0.78
HERPUD1-201ENST00000300302 CYP27B1O15528 508 aa19.94■□□□□ 0.78
HERPUD1-201ENST00000300302 KDM6AO15550 1401 aaPredicted RBP19.94■□□□□ 0.78
HERPUD1-201ENST00000300302 SLC52A2Q9HAB3 445 aa19.94■□□□□ 0.78
HERPUD1-201ENST00000300302 HDGFL1Q5TGJ6 251 aa19.92■□□□□ 0.78
HERPUD1-201ENST00000300302 CACNA1FO60840 1977 aa19.92■□□□□ 0.78
HERPUD1-201ENST00000300302 ZBTB40Q9NUA8 1239 aa19.91■□□□□ 0.78
HERPUD1-201ENST00000300302 MRC1P22897 1456 aa19.91■□□□□ 0.78
HERPUD1-201ENST00000300302 RWDD1Q9H446 243 aaPredicted RBP19.9■□□□□ 0.78
HERPUD1-201ENST00000300302 USP35Q9P2H5 1018 aa19.9■□□□□ 0.78
HERPUD1-201ENST00000300302 PCDHB15Q9Y5E8 787 aa19.9■□□□□ 0.78
HERPUD1-201ENST00000300302 KCNQ3O43525 872 aa19.9■□□□□ 0.78
HERPUD1-201ENST00000300302 IGHDP01880 384 aa19.89■□□□□ 0.77
HERPUD1-201ENST00000300302 INTS3Q68E01 1043 aaKnown RBP19.89■□□□□ 0.77
HERPUD1-201ENST00000300302 NFATC2IPQ8NCF5 419 aa19.89■□□□□ 0.77
HERPUD1-201ENST00000300302 RGS12O14924 1447 aa19.88■□□□□ 0.77
HERPUD1-201ENST00000300302 SPATA31A6Q5VVP1 1343 aa19.88■□□□□ 0.77
HERPUD1-201ENST00000300302 ZBTB7BO15156 539 aaPredicted RBP19.88■□□□□ 0.77
HERPUD1-201ENST00000300302 CABP4P57796 275 aa19.88■□□□□ 0.77
HERPUD1-201ENST00000300302 ZNF790Q6PG37 636 aa19.88■□□□□ 0.77
HERPUD1-201ENST00000300302 NECTIN2Q92692 538 aa19.88■□□□□ 0.77
HERPUD1-201ENST00000300302 PLCH1Q4KWH8 1693 aa19.88■□□□□ 0.77
HERPUD1-201ENST00000300302 C8orf37Q96NL8 207 aa19.87■□□□□ 0.77
HERPUD1-201ENST00000300302 HEG1Q9ULI3 1381 aa19.87■□□□□ 0.77
HERPUD1-201ENST00000300302 LRP6O75581 1613 aa19.86■□□□□ 0.77
HERPUD1-201ENST00000300302 GIGYF1O75420 1035 aaPredicted RBP19.86■□□□□ 0.77
HERPUD1-201ENST00000300302 EIF2S2P20042 333 aaKnown RBP19.86■□□□□ 0.77
HERPUD1-201ENST00000300302 FLIIQ13045 1269 aa19.86■□□□□ 0.77
HERPUD1-201ENST00000300302 NKX1-1Q15270 411 aaPredicted RBP19.86■□□□□ 0.77
HERPUD1-201ENST00000300302 G2E3Q7L622 706 aa19.86■□□□□ 0.77
HERPUD1-201ENST00000300302 ERVV-2B6SEH9 535 aa19.85■□□□□ 0.77
HERPUD1-201ENST00000300302 FKBP5Q13451 457 aaPredicted RBP19.85■□□□□ 0.77
HERPUD1-201ENST00000300302 TTC5Q8N0Z6 440 aa19.85■□□□□ 0.77
HERPUD1-201ENST00000300302 SHANK3Q9BYB0 1731 aa19.84■□□□□ 0.77
HERPUD1-201ENST00000300302 HDAC1Q13547 482 aaPredicted RBP19.84■□□□□ 0.77
HERPUD1-201ENST00000300302 DDX54Q8TDD1 881 aaKnown RBP19.84■□□□□ 0.77
HERPUD1-201ENST00000300302 NGLY1Q96IV0 654 aa19.84■□□□□ 0.77
HERPUD1-201ENST00000300302 CCT4P50991 539 aaKnown RBP19.84■□□□□ 0.77
HERPUD1-201ENST00000300302 DBF4Q9UBU7 674 aaPredicted RBP19.83■□□□□ 0.76
HERPUD1-201ENST00000300302 SLIT2O94813 1529 aa19.82■□□□□ 0.76
HERPUD1-201ENST00000300302 DISP2A7MBM2 1401 aa19.82■□□□□ 0.76
HERPUD1-201ENST00000300302 SLC39A6Q13433 755 aa19.82■□□□□ 0.76
HERPUD1-201ENST00000300302 NRAPQ86VF7 1730 aa19.82■□□□□ 0.76
HERPUD1-201ENST00000300302 CDCA7Q9BWT1 371 aaPredicted RBP19.82■□□□□ 0.76
HERPUD1-201ENST00000300302 CHPF2Q9P2E5 772 aa19.82■□□□□ 0.76
HERPUD1-201ENST00000300302 NWD2Q9ULI1 1742 aa19.81■□□□□ 0.76
HERPUD1-201ENST00000300302 SLC4A10Q6U841 1118 aa19.81■□□□□ 0.76
HERPUD1-201ENST00000300302 THRAP3Q9Y2W1 955 aaKnown RBP19.81■□□□□ 0.76
HERPUD1-201ENST00000300302 MEX3CQ5U5Q3 659 aaKnown RBP19.8■□□□□ 0.76
HERPUD1-201ENST00000300302 FMNL2Q96PY5 1086 aa19.8■□□□□ 0.76
HERPUD1-201ENST00000300302 PXDNLA1KZ92 1463 aa19.79■□□□□ 0.76
HERPUD1-201ENST00000300302 F6X3S4 739 aa19.79■□□□□ 0.76
HERPUD1-201ENST00000300302 UNC5CLQ8IV45 518 aa19.79■□□□□ 0.76
HERPUD1-201ENST00000300302 CCDC9Q9Y3X0 531 aaKnown RBP19.79■□□□□ 0.76
HERPUD1-201ENST00000300302 WNK3Q9BYP7 1800 aa19.79■□□□□ 0.76
HERPUD1-201ENST00000300302 SNRPA1P09661 255 aaKnown RBP19.78■□□□□ 0.76
HERPUD1-201ENST00000300302 ZNF496Q96IT1 587 aaPredicted RBP19.78■□□□□ 0.76
HERPUD1-201ENST00000300302 PHAXQ9H814 394 aaKnown RBP19.78■□□□□ 0.76
HERPUD1-201ENST00000300302 SPATA31A1Q5TZJ5 1347 aa19.78■□□□□ 0.76
HERPUD1-201ENST00000300302 EXOC5O00471 708 aa19.77■□□□□ 0.76
HERPUD1-201ENST00000300302 FNBP4Q8N3X1 1017 aaPredicted RBP19.77■□□□□ 0.76
HERPUD1-201ENST00000300302 HYPKQ9NX55 129 aa19.77■□□□□ 0.76
HERPUD1-201ENST00000300302 BCL9LQ86UU0 1499 aa19.77■□□□□ 0.76
HERPUD1-201ENST00000300302 PRAMEF22A3QJZ6 481 aa19.76■□□□□ 0.75
HERPUD1-201ENST00000300302 SPATA31A5Q5VU36 1347 aa19.75■□□□□ 0.75
HERPUD1-201ENST00000300302 SPATA31A7Q8IWB4 1347 aa19.75■□□□□ 0.75
HERPUD1-201ENST00000300302 C1orf115Q9H7X2 142 aa19.75■□□□□ 0.75
HERPUD1-201ENST00000300302 DDX21Q9NR30 783 aaKnown RBP eCLIP19.75■□□□□ 0.75
HERPUD1-201ENST00000300302 USP21Q9UK80 565 aa19.75■□□□□ 0.75
HERPUD1-201ENST00000300302 N4BP2Q86UW6 1770 aaPredicted RBP19.75■□□□□ 0.75
HERPUD1-201ENST00000300302 C5P01031 1676 aa19.75■□□□□ 0.75
HERPUD1-201ENST00000300302 TMOD3Q9NYL9 352 aa19.75■□□□□ 0.75
HERPUD1-201ENST00000300302 TNS2Q63HR2 1409 aa19.74■□□□□ 0.75
HERPUD1-201ENST00000300302 SKAP1Q86WV1 359 aa19.74■□□□□ 0.75
HERPUD1-201ENST00000300302 RGS3P49796 1198 aa19.73■□□□□ 0.75
HERPUD1-201ENST00000300302 SMC5Q8IY18 1101 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms