RNA–Protein interactions for RNA: ENST00000299259.10

COPS2-201, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 1 (best) BASIC

Gene COPS2, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-201ENST00000299259 TOM1L2Q6ZVM7 507 aa13.36□□□□□ -0.27
COPS2-201ENST00000299259 PTPRCP08575 1304 aa13.36□□□□□ -0.27
COPS2-201ENST00000299259 C5P01031 1676 aa13.35□□□□□ -0.27
COPS2-201ENST00000299259 NRAPQ86VF7 1730 aa13.35□□□□□ -0.27
COPS2-201ENST00000299259 PHKG2P15735 406 aa13.34□□□□□ -0.27
COPS2-201ENST00000299259 STK31Q9BXU1 1019 aa13.34□□□□□ -0.27
COPS2-201ENST00000299259 PCDHB15Q9Y5E8 787 aa13.34□□□□□ -0.27
COPS2-201ENST00000299259 BTBD11A6QL63 1104 aa13.34□□□□□ -0.27
COPS2-201ENST00000299259 CCDC30Q5VVM6 783 aa13.34□□□□□ -0.27
COPS2-201ENST00000299259 IFNL2Q8IZJ0 200 aa13.34□□□□□ -0.27
COPS2-201ENST00000299259 CARD10Q9BWT7 1032 aa13.34□□□□□ -0.27
COPS2-201ENST00000299259 STRN4Q9NRL3 753 aa13.34□□□□□ -0.27
COPS2-201ENST00000299259 HOXB7P09629 217 aa13.33□□□□□ -0.28
COPS2-201ENST00000299259 CHMP4BQ9H444 224 aaKnown RBP13.33□□□□□ -0.28
COPS2-201ENST00000299259 LAMB4A4D0S4 1761 aa13.33□□□□□ -0.28
COPS2-201ENST00000299259 PCDH11XQ9BZA7 1347 aa13.32□□□□□ -0.28
COPS2-201ENST00000299259 PCDH11YQ9BZA8 1340 aa13.32□□□□□ -0.28
COPS2-201ENST00000299259 TOM1O60784 492 aa13.32□□□□□ -0.28
COPS2-201ENST00000299259 IGHDP01880 384 aa13.32□□□□□ -0.28
COPS2-201ENST00000299259 SLC4A2P04920 1241 aa13.32□□□□□ -0.28
COPS2-201ENST00000299259 EIF4A1P60842 406 aaKnown RBP13.32□□□□□ -0.28
COPS2-201ENST00000299259 ZBTB40Q9NUA8 1239 aa13.32□□□□□ -0.28
COPS2-201ENST00000299259 NWD2Q9ULI1 1742 aa13.32□□□□□ -0.28
COPS2-201ENST00000299259 HSP90AB1P08238 724 aaKnown RBP13.32□□□□□ -0.28
COPS2-201ENST00000299259 EVA1CP58658 441 aa13.32□□□□□ -0.28
COPS2-201ENST00000299259 LARP1Q6PKG0 1096 aaKnown RBP13.32□□□□□ -0.28
COPS2-201ENST00000299259 PAPPAQ13219 1627 aa13.31□□□□□ -0.28
COPS2-201ENST00000299259 CYP27B1O15528 508 aa13.31□□□□□ -0.28
COPS2-201ENST00000299259 HDGFL1Q5TGJ6 251 aa13.31□□□□□ -0.28
COPS2-201ENST00000299259 TOGARAM1Q9Y4F4 1720 aa13.31□□□□□ -0.28
COPS2-201ENST00000299259 PXDNLA1KZ92 1463 aa13.31□□□□□ -0.28
COPS2-201ENST00000299259 UBR2Q8IWV8 1755 aa13.31□□□□□ -0.28
COPS2-201ENST00000299259 IL2RBP14784 551 aa13.3□□□□□ -0.28
COPS2-201ENST00000299259 DCAF5Q96JK2 942 aa13.3□□□□□ -0.28
COPS2-201ENST00000299259 RWDD1Q9H446 243 aaPredicted RBP13.3□□□□□ -0.28
COPS2-201ENST00000299259 SLC52A2Q9HAB3 445 aa13.3□□□□□ -0.28
COPS2-201ENST00000299259 BTG4Q9NY30 223 aa13.3□□□□□ -0.28
COPS2-201ENST00000299259 KCNQ3O43525 872 aa13.3□□□□□ -0.28
COPS2-201ENST00000299259 INTS3Q68E01 1043 aaKnown RBP13.3□□□□□ -0.28
COPS2-201ENST00000299259 NECTIN2Q92692 538 aa13.3□□□□□ -0.28
COPS2-201ENST00000299259 CHMP4AQ9BY43 222 aa13.3□□□□□ -0.28
COPS2-201ENST00000299259 PIP4K2BP78356 416 aa13.29□□□□□ -0.28
COPS2-201ENST00000299259 G2E3Q7L622 706 aa13.29□□□□□ -0.28
COPS2-201ENST00000299259 SKAP1Q86WV1 359 aa13.29□□□□□ -0.28
COPS2-201ENST00000299259 GLI3P10071 1580 aa13.29□□□□□ -0.28
COPS2-201ENST00000299259 ZBTB7BO15156 539 aaPredicted RBP13.29□□□□□ -0.28
COPS2-201ENST00000299259 ZCRB1Q8TBF4 217 aaKnown RBP13.29□□□□□ -0.28
COPS2-201ENST00000299259 HEG1Q9ULI3 1381 aa13.28□□□□□ -0.28
COPS2-201ENST00000299259 FLIIQ13045 1269 aa13.28□□□□□ -0.28
COPS2-201ENST00000299259 HDAC1Q13547 482 aaPredicted RBP13.28□□□□□ -0.28
COPS2-201ENST00000299259 DISP2A7MBM2 1401 aa13.27□□□□□ -0.29
COPS2-201ENST00000299259 ITGB4P16144 1822 aa13.27□□□□□ -0.29
COPS2-201ENST00000299259 UBAP1LF5GYI3 381 aa13.27□□□□□ -0.29
COPS2-201ENST00000299259 FKBP5Q13451 457 aaPredicted RBP13.27□□□□□ -0.29
COPS2-201ENST00000299259 EIF2S2P20042 333 aaKnown RBP13.26□□□□□ -0.29
COPS2-201ENST00000299259 ZNF790Q6PG37 636 aa13.26□□□□□ -0.29
COPS2-201ENST00000299259 RBM19Q9Y4C8 960 aaKnown RBP13.26□□□□□ -0.29
COPS2-201ENST00000299259 GIGYF1O75420 1035 aaPredicted RBP13.25□□□□□ -0.29
COPS2-201ENST00000299259 CCT4P50991 539 aaKnown RBP13.25□□□□□ -0.29
COPS2-201ENST00000299259 NFATC2IPQ8NCF5 419 aa13.25□□□□□ -0.29
COPS2-201ENST00000299259 USP35Q9P2H5 1018 aa13.25□□□□□ -0.29
COPS2-201ENST00000299259 LRP6O75581 1613 aa13.25□□□□□ -0.29
COPS2-201ENST00000299259 CABP4P57796 275 aa13.25□□□□□ -0.29
COPS2-201ENST00000299259 C1orf115Q9H7X2 142 aa13.25□□□□□ -0.29
COPS2-201ENST00000299259 CHPF2Q9P2E5 772 aa13.25□□□□□ -0.29
COPS2-201ENST00000299259 ATP10DQ9P241 1426 aa13.24□□□□□ -0.29
COPS2-201ENST00000299259 F6X3S4 739 aa13.24□□□□□ -0.29
COPS2-201ENST00000299259 RGS3P49796 1198 aa13.24□□□□□ -0.29
COPS2-201ENST00000299259 SLC4A10Q6U841 1118 aa13.24□□□□□ -0.29
COPS2-201ENST00000299259 ADAMTS2O95450 1211 aa13.23□□□□□ -0.29
COPS2-201ENST00000299259 SLC39A6Q13433 755 aa13.23□□□□□ -0.29
COPS2-201ENST00000299259 NKX1-1Q15270 411 aaPredicted RBP13.23□□□□□ -0.29
COPS2-201ENST00000299259 TTC5Q8N0Z6 440 aa13.23□□□□□ -0.29
COPS2-201ENST00000299259 DBF4Q9UBU7 674 aaPredicted RBP13.23□□□□□ -0.29
COPS2-201ENST00000299259 DOT1LQ8TEK3 1739 aa13.23□□□□□ -0.29
COPS2-201ENST00000299259 TNS2Q63HR2 1409 aa13.23□□□□□ -0.29
COPS2-201ENST00000299259 SMC5Q8IY18 1101 aa13.22□□□□□ -0.29
COPS2-201ENST00000299259 PDZRN3Q9UPQ7 1066 aa13.22□□□□□ -0.29
COPS2-201ENST00000299259 KCPQ6ZWJ8 1503 aa13.22□□□□□ -0.29
COPS2-201ENST00000299259 ERVV-2B6SEH9 535 aa13.22□□□□□ -0.29
COPS2-201ENST00000299259 DDX54Q8TDD1 881 aaKnown RBP13.22□□□□□ -0.29
COPS2-201ENST00000299259 MEIS3Q99687 375 aa13.22□□□□□ -0.29
COPS2-201ENST00000299259 PHAXQ9H814 394 aaKnown RBP13.22□□□□□ -0.29
COPS2-201ENST00000299259 SLIT2O94813 1529 aa13.21□□□□□ -0.29
COPS2-201ENST00000299259 PRAMEF22A3QJZ6 481 aa13.21□□□□□ -0.29
COPS2-201ENST00000299259 NUTM2BA6NNL0 878 aaPredicted RBP13.21□□□□□ -0.29
COPS2-201ENST00000299259 NUTM2EB1AL46 878 aaPredicted RBP13.21□□□□□ -0.29
COPS2-201ENST00000299259 NUTM2AQ8IVF1 878 aaPredicted RBP13.21□□□□□ -0.29
COPS2-201ENST00000299259 ZNF496Q96IT1 587 aaPredicted RBP13.21□□□□□ -0.29
COPS2-201ENST00000299259 JCADQ9P266 1359 aa13.21□□□□□ -0.3
COPS2-201ENST00000299259 FMNL2Q96PY5 1086 aa13.2□□□□□ -0.3
COPS2-201ENST00000299259 ARFGEF2Q9Y6D5 1785 aa13.2□□□□□ -0.3
COPS2-201ENST00000299259 ANXA1P04083 346 aa13.2□□□□□ -0.3
COPS2-201ENST00000299259 KAT6BQ8WYB5 2073 aa13.2□□□□□ -0.3
COPS2-201ENST00000299259 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.19□□□□□ -0.3
COPS2-201ENST00000299259 AFDNP55196 1824 aaKnown RBP13.19□□□□□ -0.3
COPS2-201ENST00000299259 PDE4AP27815 886 aa13.19□□□□□ -0.3
COPS2-201ENST00000299259 HYPKQ9NX55 129 aa13.19□□□□□ -0.3
COPS2-201ENST00000299259 ADCY9O60503 1353 aa13.19□□□□□ -0.3
COPS2-201ENST00000299259 SNRPA1P09661 255 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms