RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 HEG1Q9ULI3 1381 aa17.16■□□□□ 0.34
CHMP4C-201ENST00000297265 F6X3S4 739 aa17.16■□□□□ 0.34
CHMP4C-201ENST00000297265 NECTIN2Q92692 538 aa17.16■□□□□ 0.34
CHMP4C-201ENST00000297265 ABCA3Q99758 1704 aa17.15■□□□□ 0.34
CHMP4C-201ENST00000297265 BTBD11A6QL63 1104 aa17.15■□□□□ 0.34
CHMP4C-201ENST00000297265 TEFQ10587 303 aa17.15■□□□□ 0.34
CHMP4C-201ENST00000297265 FLIIQ13045 1269 aa17.15■□□□□ 0.34
CHMP4C-201ENST00000297265 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.15■□□□□ 0.34
CHMP4C-201ENST00000297265 NUCB1Q02818 461 aa17.14■□□□□ 0.33
CHMP4C-201ENST00000297265 RAPGEF4Q8WZA2 1011 aa17.14■□□□□ 0.33
CHMP4C-201ENST00000297265 STK31Q9BXU1 1019 aa17.14■□□□□ 0.33
CHMP4C-201ENST00000297265 KDM6AO15550 1401 aaPredicted RBP17.14■□□□□ 0.33
CHMP4C-201ENST00000297265 ATP10DQ9P241 1426 aa17.14■□□□□ 0.33
CHMP4C-201ENST00000297265 SCN11AQ9UI33 1791 aa17.13■□□□□ 0.33
CHMP4C-201ENST00000297265 HOXB7P09629 217 aa17.13■□□□□ 0.33
CHMP4C-201ENST00000297265 PHKG2P15735 406 aa17.13■□□□□ 0.33
CHMP4C-201ENST00000297265 MEIS3Q99687 375 aa17.13■□□□□ 0.33
CHMP4C-201ENST00000297265 PLEKHG2Q9H7P9 1386 aa17.13■□□□□ 0.33
CHMP4C-201ENST00000297265 TATP17735 454 aaPredicted RBP17.12■□□□□ 0.33
CHMP4C-201ENST00000297265 HDGFL1Q5TGJ6 251 aa17.12■□□□□ 0.33
CHMP4C-201ENST00000297265 PKD1L3Q7Z443 1732 aa17.12■□□□□ 0.33
CHMP4C-201ENST00000297265 CYP27B1O15528 508 aa17.12■□□□□ 0.33
CHMP4C-201ENST00000297265 CSB-PGBD3P0DP91 1061 aa17.12■□□□□ 0.33
CHMP4C-201ENST00000297265 PHAXQ9H814 394 aaKnown RBP17.12■□□□□ 0.33
CHMP4C-201ENST00000297265 PRDM11Q9NQV5 511 aa17.11■□□□□ 0.33
CHMP4C-201ENST00000297265 SEC24BO95487 1268 aa17.1■□□□□ 0.33
CHMP4C-201ENST00000297265 ANP32AP39687 249 aaKnown RBP17.1■□□□□ 0.33
CHMP4C-201ENST00000297265 GCC1Q96CN9 775 aa17.1■□□□□ 0.33
CHMP4C-201ENST00000297265 IPO9Q96P70 1041 aaKnown RBP17.1■□□□□ 0.33
CHMP4C-201ENST00000297265 COL5A2P05997 1499 aaPredicted RBP17.1■□□□□ 0.33
CHMP4C-201ENST00000297265 WDR17Q8IZU2 1322 aa17.1■□□□□ 0.33
CHMP4C-201ENST00000297265 GIGYF1O75420 1035 aaPredicted RBP17.1■□□□□ 0.33
CHMP4C-201ENST00000297265 CCT4P50991 539 aaKnown RBP17.1■□□□□ 0.33
CHMP4C-201ENST00000297265 SLC4A10Q6U841 1118 aa17.1■□□□□ 0.33
CHMP4C-201ENST00000297265 CHD1LQ86WJ1 897 aa17.1■□□□□ 0.33
CHMP4C-201ENST00000297265 ANKRD44Q8N8A2 993 aa17.1■□□□□ 0.33
CHMP4C-201ENST00000297265 SPG7Q9UQ90 795 aa17.1■□□□□ 0.33
CHMP4C-201ENST00000297265 EIF2S2P20042 333 aaKnown RBP17.09■□□□□ 0.33
CHMP4C-201ENST00000297265 FKBP5Q13451 457 aaPredicted RBP17.09■□□□□ 0.33
CHMP4C-201ENST00000297265 CEP85Q6P2H3 762 aa17.09■□□□□ 0.33
CHMP4C-201ENST00000297265 NPM2Q86SE8 214 aaKnown RBP17.09■□□□□ 0.33
CHMP4C-201ENST00000297265 N4BP2Q86UW6 1770 aaPredicted RBP17.09■□□□□ 0.33
CHMP4C-201ENST00000297265 PRAMEF22A3QJZ6 481 aa17.08■□□□□ 0.33
CHMP4C-201ENST00000297265 IFNL2Q8IZJ0 200 aa17.08■□□□□ 0.33
CHMP4C-201ENST00000297265 DCTPP1Q9H773 170 aa17.08■□□□□ 0.33
CHMP4C-201ENST00000297265 SLC52A2Q9HAB3 445 aa17.08■□□□□ 0.33
CHMP4C-201ENST00000297265 RPAP2Q8IXW5 612 aaPredicted RBP17.07■□□□□ 0.32
CHMP4C-201ENST00000297265 LNPKQ9C0E8 428 aa17.07■□□□□ 0.32
CHMP4C-201ENST00000297265 CHPF2Q9P2E5 772 aa17.07■□□□□ 0.32
CHMP4C-201ENST00000297265 NFATC2IPQ8NCF5 419 aa17.07■□□□□ 0.32
CHMP4C-201ENST00000297265 LTBP4Q8N2S1 1624 aa17.07■□□□□ 0.32
CHMP4C-201ENST00000297265 ANKRD45Q5TZF3 282 aa17.06■□□□□ 0.32
CHMP4C-201ENST00000297265 MRC1P22897 1456 aa17.06■□□□□ 0.32
CHMP4C-201ENST00000297265 ZNF790Q6PG37 636 aa17.05■□□□□ 0.32
CHMP4C-201ENST00000297265 PXDNLA1KZ92 1463 aa17.05■□□□□ 0.32
CHMP4C-201ENST00000297265 ANXA1P04083 346 aa17.05■□□□□ 0.32
CHMP4C-201ENST00000297265 SLC39A6Q13433 755 aa17.05■□□□□ 0.32
CHMP4C-201ENST00000297265 DCAF5Q96JK2 942 aa17.05■□□□□ 0.32
CHMP4C-201ENST00000297265 USP44Q9H0E7 712 aa17.04■□□□□ 0.32
CHMP4C-201ENST00000297265 ROBO1Q9Y6N7 1651 aa17.04■□□□□ 0.32
CHMP4C-201ENST00000297265 PROSER3Q2NL68 480 aa17.03■□□□□ 0.32
CHMP4C-201ENST00000297265 TOM1L2Q6ZVM7 507 aa17.03■□□□□ 0.32
CHMP4C-201ENST00000297265 FBXO41Q8TF61 875 aa17.03■□□□□ 0.32
CHMP4C-201ENST00000297265 CARD10Q9BWT7 1032 aa17.03■□□□□ 0.32
CHMP4C-201ENST00000297265 PDIA6Q15084 440 aa17.03■□□□□ 0.32
CHMP4C-201ENST00000297265 LARP1Q6PKG0 1096 aaKnown RBP17.03■□□□□ 0.32
CHMP4C-201ENST00000297265 PARP4Q9UKK3 1724 aaKnown RBP17.02■□□□□ 0.32
CHMP4C-201ENST00000297265 DBF4Q9UBU7 674 aaPredicted RBP17.02■□□□□ 0.32
CHMP4C-201ENST00000297265 C5P01031 1676 aa17.02■□□□□ 0.32
CHMP4C-201ENST00000297265 ADCY9O60503 1353 aa17.02■□□□□ 0.31
CHMP4C-201ENST00000297265 CHMP4AQ9BY43 222 aa17.01■□□□□ 0.31
CHMP4C-201ENST00000297265 SHANK3Q9BYB0 1731 aa17.01■□□□□ 0.31
CHMP4C-201ENST00000297265 PI4KAP2A4QPH2 592 aa17.01■□□□□ 0.31
CHMP4C-201ENST00000297265 BEND3Q5T5X7 828 aa17.01■□□□□ 0.31
CHMP4C-201ENST00000297265 PI4KAP1Q8N8J0 262 aa17.01■□□□□ 0.31
CHMP4C-201ENST00000297265 AHDC1Q5TGY3 1603 aaPredicted RBP17■□□□□ 0.31
CHMP4C-201ENST00000297265 GNAI2P04899 355 aa17■□□□□ 0.31
CHMP4C-201ENST00000297265 ZNF496Q96IT1 587 aaPredicted RBP17■□□□□ 0.31
CHMP4C-201ENST00000297265 NOP58Q9Y2X3 529 aaKnown RBP17■□□□□ 0.31
CHMP4C-201ENST00000297265 ZCRB1Q8TBF4 217 aaKnown RBP16.99■□□□□ 0.31
CHMP4C-201ENST00000297265 STRN4Q9NRL3 753 aa16.99■□□□□ 0.31
CHMP4C-201ENST00000297265 GLI3P10071 1580 aa16.99■□□□□ 0.31
CHMP4C-201ENST00000297265 HSP90AB1P08238 724 aaKnown RBP16.99■□□□□ 0.31
CHMP4C-201ENST00000297265 GNAI3P08754 354 aa16.99■□□□□ 0.31
CHMP4C-201ENST00000297265 NKX1-1Q15270 411 aaPredicted RBP16.99■□□□□ 0.31
CHMP4C-201ENST00000297265 DNAAF4Q8WXU2 420 aa16.99■□□□□ 0.31
CHMP4C-201ENST00000297265 SOCS7O14512 581 aa16.98■□□□□ 0.31
CHMP4C-201ENST00000297265 IL2RBP14784 551 aa16.98■□□□□ 0.31
CHMP4C-201ENST00000297265 PNMA6EA0A0J9YXQ4 647 aa16.97■□□□□ 0.31
CHMP4C-201ENST00000297265 ATP8B2P98198 1209 aa16.97■□□□□ 0.31
CHMP4C-201ENST00000297265 LRP10Q7Z4F1 713 aa16.97■□□□□ 0.31
CHMP4C-201ENST00000297265 PLEKHM2Q8IWE5 1019 aa16.97■□□□□ 0.31
CHMP4C-201ENST00000297265 C16orf71Q8IYS4 520 aaPredicted RBP16.97■□□□□ 0.31
CHMP4C-201ENST00000297265 COL22A1Q8NFW1 1626 aaPredicted RBP16.97■□□□□ 0.31
CHMP4C-201ENST00000297265 PCDH11XQ9BZA7 1347 aa16.97■□□□□ 0.31
CHMP4C-201ENST00000297265 PCDH11YQ9BZA8 1340 aa16.97■□□□□ 0.31
CHMP4C-201ENST00000297265 BMP2KLQ5H9B9 411 aa16.97■□□□□ 0.31
CHMP4C-201ENST00000297265 SRCIN1Q9C0H9 1055 aa16.97■□□□□ 0.31
CHMP4C-201ENST00000297265 DDX21Q9NR30 783 aaKnown RBP eCLIP16.97■□□□□ 0.31
CHMP4C-201ENST00000297265 ZBTB47Q9UFB7 747 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms