RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 CAMK4Q16566 473 aa18.92■□□□□ 0.62
ARHGEF28-201ENST00000296794 CCDC183Q5T5S1 534 aa18.92■□□□□ 0.62
ARHGEF28-201ENST00000296794 ZNF652Q9Y2D9 606 aa18.92■□□□□ 0.62
ARHGEF28-201ENST00000296794 NSD2O96028 1365 aa18.91■□□□□ 0.62
ARHGEF28-201ENST00000296794 NOM1Q5C9Z4 860 aaKnown RBP18.91■□□□□ 0.62
ARHGEF28-201ENST00000296794 ERCC4Q92889 916 aaPredicted RBP18.91■□□□□ 0.62
ARHGEF28-201ENST00000296794 BAG4O95429 457 aaKnown RBP18.91■□□□□ 0.62
ARHGEF28-201ENST00000296794 DDX11Q96FC9 970 aa18.91■□□□□ 0.62
ARHGEF28-201ENST00000296794 GPATCH8Q9UKJ3 1502 aaKnown RBP18.9■□□□□ 0.62
ARHGEF28-201ENST00000296794 HDAC1Q13547 482 aaPredicted RBP18.9■□□□□ 0.62
ARHGEF28-201ENST00000296794 KRT28Q7Z3Y7 464 aa18.9■□□□□ 0.62
ARHGEF28-201ENST00000296794 IGHMBP2P38935 993 aaKnown RBP18.89■□□□□ 0.61
ARHGEF28-201ENST00000296794 PLEKHH1Q9ULM0 1364 aa18.89■□□□□ 0.61
ARHGEF28-201ENST00000296794 NOS1P29475 1434 aa18.89■□□□□ 0.61
ARHGEF28-201ENST00000296794 FKBP4Q02790 459 aaKnown RBP eCLIP18.89■□□□□ 0.61
ARHGEF28-201ENST00000296794 ZSCAN25Q6NSZ9 544 aa18.89■□□□□ 0.61
ARHGEF28-201ENST00000296794 CWC15Q9P013 229 aaKnown RBP18.89■□□□□ 0.61
ARHGEF28-201ENST00000296794 EXOC5O00471 708 aa18.89■□□□□ 0.61
ARHGEF28-201ENST00000296794 TRIM22Q8IYM9 498 aa18.88■□□□□ 0.61
ARHGEF28-201ENST00000296794 IL16Q14005 1332 aa18.88■□□□□ 0.61
ARHGEF28-201ENST00000296794 ZPR1O75312 459 aa18.88■□□□□ 0.61
ARHGEF28-201ENST00000296794 TNRQ92752 1358 aa18.88■□□□□ 0.61
ARHGEF28-201ENST00000296794 RBM5P52756 815 aaKnown RBP eCLIP18.87■□□□□ 0.61
ARHGEF28-201ENST00000296794 NUCB1Q02818 461 aa18.87■□□□□ 0.61
ARHGEF28-201ENST00000296794 LRRFIP2Q9Y608 721 aaKnown RBP18.87■□□□□ 0.61
ARHGEF28-201ENST00000296794 FAM177A1Q8N128 213 aaPredicted RBP18.87■□□□□ 0.61
ARHGEF28-201ENST00000296794 OFD1O75665 1012 aa18.87■□□□□ 0.61
ARHGEF28-201ENST00000296794 TXLNAP40222 546 aa18.87■□□□□ 0.61
ARHGEF28-201ENST00000296794 ATP2B2Q01814 1243 aa18.87■□□□□ 0.61
ARHGEF28-201ENST00000296794 TAF7Q15545 349 aaPredicted RBP18.87■□□□□ 0.61
ARHGEF28-201ENST00000296794 KLHL40Q2TBA0 621 aa18.87■□□□□ 0.61
ARHGEF28-201ENST00000296794 STK11IPQ8N1F8 1099 aa18.87■□□□□ 0.61
ARHGEF28-201ENST00000296794 PDCL2Q8N4E4 241 aa18.87■□□□□ 0.61
ARHGEF28-201ENST00000296794 C14orf93Q9H972 538 aaKnown RBP18.87■□□□□ 0.61
ARHGEF28-201ENST00000296794 SH2B1Q9NRF2 756 aaPredicted RBP18.87■□□□□ 0.61
ARHGEF28-201ENST00000296794 MBIPQ9NS73 344 aa18.87■□□□□ 0.61
ARHGEF28-201ENST00000296794 CBFA2T2O43439 604 aa18.86■□□□□ 0.61
ARHGEF28-201ENST00000296794 PIP4K2AP48426 406 aaPredicted RBP18.86■□□□□ 0.61
ARHGEF28-201ENST00000296794 PPFIBP1Q86W92 1011 aa18.86■□□□□ 0.61
ARHGEF28-201ENST00000296794 USP25Q9UHP3 1055 aa18.86■□□□□ 0.61
ARHGEF28-201ENST00000296794 DACH1Q9UI36 760 aa18.86■□□□□ 0.61
ARHGEF28-201ENST00000296794 TTC22Q5TAA0 569 aa18.86■□□□□ 0.61
ARHGEF28-201ENST00000296794 MPRIPQ6WCQ1 1025 aa18.86■□□□□ 0.61
ARHGEF28-201ENST00000296794 GDPD2Q9HCC8 539 aa18.86■□□□□ 0.61
ARHGEF28-201ENST00000296794 CTNNA3Q9UI47 895 aa18.86■□□□□ 0.61
ARHGEF28-201ENST00000296794 PTPRCP08575 1304 aa18.86■□□□□ 0.61
ARHGEF28-201ENST00000296794 LIMCH1Q9UPQ0 1083 aa18.86■□□□□ 0.61
ARHGEF28-201ENST00000296794 ASXL1Q8IXJ9 1541 aa18.86■□□□□ 0.61
ARHGEF28-201ENST00000296794 PATL2C9JE40 543 aaKnown RBP18.85■□□□□ 0.61
ARHGEF28-201ENST00000296794 SCAND2PQ9GZW5 306 aaPredicted RBP18.85■□□□□ 0.61
ARHGEF28-201ENST00000296794 MAGEC2Q9UBF1 373 aaPredicted RBP18.85■□□□□ 0.61
ARHGEF28-201ENST00000296794 CDR1P51861 262 aa18.85■□□□□ 0.61
ARHGEF28-201ENST00000296794 LARP1Q6PKG0 1096 aaKnown RBP18.85■□□□□ 0.61
ARHGEF28-201ENST00000296794 CCDC69A6NI79 296 aa18.85■□□□□ 0.61
ARHGEF28-201ENST00000296794 EPS15P42566 896 aa18.85■□□□□ 0.61
ARHGEF28-201ENST00000296794 USHBP1Q8N6Y0 703 aa18.85■□□□□ 0.61
ARHGEF28-201ENST00000296794 CNKSR2Q8WXI2 1034 aa18.85■□□□□ 0.61
ARHGEF28-201ENST00000296794 PRAG1Q86YV5 1406 aa18.84■□□□□ 0.61
ARHGEF28-201ENST00000296794 TEX14Q8IWB6 1497 aa18.84■□□□□ 0.61
ARHGEF28-201ENST00000296794 TOM1O60784 492 aa18.84■□□□□ 0.61
ARHGEF28-201ENST00000296794 BOLA2Q9H3K6 86 aa18.84■□□□□ 0.61
ARHGEF28-201ENST00000296794 CDKL5O76039 1030 aa18.84■□□□□ 0.61
ARHGEF28-201ENST00000296794 RBM27Q9P2N5 1060 aaKnown RBP18.84■□□□□ 0.61
ARHGEF28-201ENST00000296794 XRCC6P12956 609 aaKnown RBP eCLIP18.83■□□□□ 0.61
ARHGEF28-201ENST00000296794 CCDC85AQ96PX6 553 aaPredicted RBP18.83■□□□□ 0.61
ARHGEF28-201ENST00000296794 FLIIQ13045 1269 aa18.82■□□□□ 0.6
ARHGEF28-201ENST00000296794 LARP6Q9BRS8 491 aaKnown RBP18.82■□□□□ 0.6
ARHGEF28-201ENST00000296794 FAM83GA6ND36 823 aa18.82■□□□□ 0.6
ARHGEF28-201ENST00000296794 ZSCAN29Q8IWY8 852 aaPredicted RBP18.82■□□□□ 0.6
ARHGEF28-201ENST00000296794 NUP133Q8WUM0 1156 aa18.82■□□□□ 0.6
ARHGEF28-201ENST00000296794 RAI14Q9P0K7 980 aa18.82■□□□□ 0.6
ARHGEF28-201ENST00000296794 ANKRD36BQ8N2N9 1353 aa18.81■□□□□ 0.6
ARHGEF28-201ENST00000296794 SMTNL1A8MU46 457 aa18.81■□□□□ 0.6
ARHGEF28-201ENST00000296794 ASXL2Q76L83 1435 aa18.81■□□□□ 0.6
ARHGEF28-201ENST00000296794 LEKR1Q6ZMV7 388 aa18.81■□□□□ 0.6
ARHGEF28-201ENST00000296794 LRP2BPQ9P2M1 347 aa18.81■□□□□ 0.6
ARHGEF28-201ENST00000296794 MSH6P52701 1360 aa18.81■□□□□ 0.6
ARHGEF28-201ENST00000296794 TSHZ3Q63HK5 1081 aa18.81■□□□□ 0.6
ARHGEF28-201ENST00000296794 TMOD2Q9NZR1 351 aa18.81■□□□□ 0.6
ARHGEF28-201ENST00000296794 ARHGAP45Q92619 1136 aa18.81■□□□□ 0.6
ARHGEF28-201ENST00000296794 ZSCAN23Q3MJ62 389 aa18.8■□□□□ 0.6
ARHGEF28-201ENST00000296794 HSP90AB3PQ58FF7 597 aa18.8■□□□□ 0.6
ARHGEF28-201ENST00000296794 ZNHIT6Q9NWK9 470 aaKnown RBP18.8■□□□□ 0.6
ARHGEF28-201ENST00000296794 TNNQ9UQP3 1299 aa18.8■□□□□ 0.6
ARHGEF28-201ENST00000296794 DNAAF4Q8WXU2 420 aa18.8■□□□□ 0.6
ARHGEF28-201ENST00000296794 PANK2Q9BZ23 570 aa18.8■□□□□ 0.6
ARHGEF28-201ENST00000296794 CKAP2LQ8IYA6 745 aa18.79■□□□□ 0.6
ARHGEF28-201ENST00000296794 TESK2Q96S53 571 aa18.79■□□□□ 0.6
ARHGEF28-201ENST00000296794 UBAP1LF5GYI3 381 aa18.79■□□□□ 0.6
ARHGEF28-201ENST00000296794 CCDC8Q9H0W5 538 aaPredicted RBP18.79■□□□□ 0.6
ARHGEF28-201ENST00000296794 IMMTQ16891 758 aaKnown RBP18.79■□□□□ 0.6
ARHGEF28-201ENST00000296794 METTL24Q5JXM2 366 aa18.79■□□□□ 0.6
ARHGEF28-201ENST00000296794 CDK5RAP3Q96JB5 506 aa18.79■□□□□ 0.6
ARHGEF28-201ENST00000296794 NUP160Q12769 1436 aa18.79■□□□□ 0.6
ARHGEF28-201ENST00000296794 STX6O43752 255 aa18.79■□□□□ 0.6
ARHGEF28-201ENST00000296794 PTPN14Q15678 1187 aa18.79■□□□□ 0.6
ARHGEF28-201ENST00000296794 AXDND1Q5T1B0 1012 aaPredicted RBP18.79■□□□□ 0.6
ARHGEF28-201ENST00000296794 RLBP1P12271 317 aa18.78■□□□□ 0.6
ARHGEF28-201ENST00000296794 CFAP100Q494V2 611 aa18.78■□□□□ 0.6
ARHGEF28-201ENST00000296794 TTC21BQ7Z4L5 1316 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms