RNA–Protein interactions for RNA: ENST00000296137.6

FYCO1-201, Transcript of FYVE and coiled-coil domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FYCO1, Length 8,504 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1-201ENST00000296137 SLU7O95391 586 aaKnown RBP12.74□□□□□ -0.37
FYCO1-201ENST00000296137 KLHL10Q6JEL2 608 aa12.74□□□□□ -0.37
FYCO1-201ENST00000296137 TANGO6Q9C0B7 1094 aa12.74□□□□□ -0.37
FYCO1-201ENST00000296137 CKAP4Q07065 602 aaKnown RBP12.74□□□□□ -0.37
FYCO1-201ENST00000296137 CCDC172P0C7W6 258 aa12.74□□□□□ -0.37
FYCO1-201ENST00000296137 TSNAXIP1Q2TAA8 658 aa12.74□□□□□ -0.37
FYCO1-201ENST00000296137 HDXQ7Z353 690 aa12.74□□□□□ -0.37
FYCO1-201ENST00000296137 TUBB4AP04350 444 aa12.74□□□□□ -0.37
FYCO1-201ENST00000296137 ZSCAN23Q3MJ62 389 aa12.74□□□□□ -0.37
FYCO1-201ENST00000296137 EHBP1Q8NDI1 1231 aa12.74□□□□□ -0.37
FYCO1-201ENST00000296137 MKRN1Q9UHC7 482 aaKnown RBP12.74□□□□□ -0.37
FYCO1-201ENST00000296137 TERF1P54274 439 aa12.74□□□□□ -0.37
FYCO1-201ENST00000296137 SAFB2Q14151 953 aaKnown RBP eCLIP12.74□□□□□ -0.37
FYCO1-201ENST00000296137 HSP90AB4PQ58FF6 505 aa12.74□□□□□ -0.37
FYCO1-201ENST00000296137 IFT74Q96LB3 600 aa12.74□□□□□ -0.37
FYCO1-201ENST00000296137 STK26Q9P289 416 aa12.74□□□□□ -0.37
FYCO1-201ENST00000296137 CYP46A1Q9Y6A2 500 aa12.74□□□□□ -0.37
FYCO1-201ENST00000296137 FAM76AQ8TAV0 307 aa12.73□□□□□ -0.37
FYCO1-201ENST00000296137 GTF3C6Q969F1 213 aa12.73□□□□□ -0.37
FYCO1-201ENST00000296137 USO1O60763 962 aaKnown RBP12.73□□□□□ -0.37
FYCO1-201ENST00000296137 FOXD1Q16676 465 aa12.73□□□□□ -0.37
FYCO1-201ENST00000296137 TNPO1Q92973 898 aaKnown RBP12.73□□□□□ -0.37
FYCO1-201ENST00000296137 STMN4Q9H169 189 aaPredicted RBP12.73□□□□□ -0.37
FYCO1-201ENST00000296137 ARHGAP25P42331 645 aa12.73□□□□□ -0.37
FYCO1-201ENST00000296137 PIP4K2BP78356 416 aa12.73□□□□□ -0.37
FYCO1-201ENST00000296137 USP47Q96K76 1375 aa12.73□□□□□ -0.37
FYCO1-201ENST00000296137 A6NNZ2 444 aa12.73□□□□□ -0.37
FYCO1-201ENST00000296137 RFC1P35251 1148 aaPredicted RBP12.73□□□□□ -0.37
FYCO1-201ENST00000296137 TUBB8Q3ZCM7 444 aa12.73□□□□□ -0.37
FYCO1-201ENST00000296137 DDX27Q96GQ7 796 aaKnown RBP12.73□□□□□ -0.37
FYCO1-201ENST00000296137 SERPINA10Q9UK55 444 aa12.73□□□□□ -0.37
FYCO1-201ENST00000296137 CTDP1Q9Y5B0 961 aaPredicted RBP12.73□□□□□ -0.37
FYCO1-201ENST00000296137 RPUSD2Q8IZ73 545 aaKnown RBP12.72□□□□□ -0.37
FYCO1-201ENST00000296137 CTCFLQ8NI51 663 aaPredicted RBP12.72□□□□□ -0.37
FYCO1-201ENST00000296137 MPHOSPH9Q99550 1183 aa12.72□□□□□ -0.37
FYCO1-201ENST00000296137 CCDC38Q502W7 563 aa12.72□□□□□ -0.37
FYCO1-201ENST00000296137 PRDM2Q13029 1718 aa12.72□□□□□ -0.37
FYCO1-201ENST00000296137 FSD2A1L4K1 749 aa12.72□□□□□ -0.37
FYCO1-201ENST00000296137 PDZRN3Q9UPQ7 1066 aa12.72□□□□□ -0.37
FYCO1-201ENST00000296137 MAP7Q14244 749 aa12.72□□□□□ -0.37
FYCO1-201ENST00000296137 STMN2Q93045 179 aa12.72□□□□□ -0.37
FYCO1-201ENST00000296137 TTC14Q96N46 770 aa12.72□□□□□ -0.37
FYCO1-201ENST00000296137 TSPYL2Q9H2G4 693 aaPredicted RBP12.72□□□□□ -0.37
FYCO1-201ENST00000296137 DHX57Q6P158 1386 aaKnown RBP12.71□□□□□ -0.37
FYCO1-201ENST00000296137 ZEB2O60315 1214 aa12.71□□□□□ -0.37
FYCO1-201ENST00000296137 PFDN1O60925 122 aa12.71□□□□□ -0.37
FYCO1-201ENST00000296137 CCDC155Q8N6L0 562 aa12.71□□□□□ -0.37
FYCO1-201ENST00000296137 CCDC12Q8WUD4 166 aaPredicted RBP12.71□□□□□ -0.37
FYCO1-201ENST00000296137 CTAGE9A4FU28 777 aa12.71□□□□□ -0.37
FYCO1-201ENST00000296137 GCC1Q96CN9 775 aa12.71□□□□□ -0.37
FYCO1-201ENST00000296137 MXRA7P84157 204 aa12.71□□□□□ -0.37
FYCO1-201ENST00000296137 CPLX4Q7Z7G2 160 aa12.71□□□□□ -0.37
FYCO1-201ENST00000296137 PPFIBP2Q8ND30 876 aa12.71□□□□□ -0.37
FYCO1-201ENST00000296137 NUP88Q99567 741 aaPredicted RBP12.71□□□□□ -0.37
FYCO1-201ENST00000296137 VCX3BQ9H321 246 aa12.71□□□□□ -0.37
FYCO1-201ENST00000296137 JADE2Q9NQC1 790 aa12.71□□□□□ -0.37
FYCO1-201ENST00000296137 TRIM4Q9C037 500 aa12.71□□□□□ -0.37
FYCO1-201ENST00000296137 BRD4O60885 1362 aaPredicted RBP12.71□□□□□ -0.37
FYCO1-201ENST00000296137 SSBP05455 408 aaKnown RBP eCLIP12.71□□□□□ -0.38
FYCO1-201ENST00000296137 SART3Q15020 963 aaKnown RBP12.71□□□□□ -0.38
FYCO1-201ENST00000296137 STX1AQ16623 288 aa12.71□□□□□ -0.38
FYCO1-201ENST00000296137 EFCAB2Q5VUJ9 269 aa12.71□□□□□ -0.38
FYCO1-201ENST00000296137 RAB3IL1Q8TBN0 382 aa12.71□□□□□ -0.38
FYCO1-201ENST00000296137 NUP155O75694 1391 aa12.71□□□□□ -0.38
FYCO1-201ENST00000296137 LRSAM1Q6UWE0 723 aa12.71□□□□□ -0.38
FYCO1-201ENST00000296137 PEX19P40855 299 aa12.71□□□□□ -0.38
FYCO1-201ENST00000296137 KLHL40Q2TBA0 621 aa12.71□□□□□ -0.38
FYCO1-201ENST00000296137 MRFAP1L1Q96HT8 127 aa12.71□□□□□ -0.38
FYCO1-201ENST00000296137 PPP1R12CQ9BZL4 782 aa12.71□□□□□ -0.38
FYCO1-201ENST00000296137 A0A1W2PRG0 241 aa12.7□□□□□ -0.38
FYCO1-201ENST00000296137 PKD2Q13563 968 aa12.7□□□□□ -0.38
FYCO1-201ENST00000296137 G3BP1Q13283 466 aaKnown RBP eCLIP12.7□□□□□ -0.38
FYCO1-201ENST00000296137 CASTP20810 708 aaKnown RBP12.7□□□□□ -0.38
FYCO1-201ENST00000296137 GNG11P61952 73 aa12.7□□□□□ -0.38
FYCO1-201ENST00000296137 SMC6Q96SB8 1091 aa12.7□□□□□ -0.38
FYCO1-201ENST00000296137 CTAGE6Q86UF2 777 aa12.7□□□□□ -0.38
FYCO1-201ENST00000296137 PUS7Q96PZ0 661 aaKnown RBP12.7□□□□□ -0.38
FYCO1-201ENST00000296137 PANK2Q9BZ23 570 aa12.7□□□□□ -0.38
FYCO1-201ENST00000296137 PANK3Q9H999 370 aa12.69□□□□□ -0.38
FYCO1-201ENST00000296137 SAMD15Q9P1V8 674 aa12.69□□□□□ -0.38
FYCO1-201ENST00000296137 PDE3AQ14432 1141 aa12.69□□□□□ -0.38
FYCO1-201ENST00000296137 AFAP1L1Q8TED9 768 aa12.69□□□□□ -0.38
FYCO1-201ENST00000296137 LUC7L3O95232 432 aaKnown RBP12.69□□□□□ -0.38
FYCO1-201ENST00000296137 TUBBP07437 444 aa12.69□□□□□ -0.38
FYCO1-201ENST00000296137 TMC6Q7Z403 805 aa12.69□□□□□ -0.38
FYCO1-201ENST00000296137 HOOK3Q86VS8 718 aa12.69□□□□□ -0.38
FYCO1-201ENST00000296137 UTP14CQ5TAP6 766 aaKnown RBP12.69□□□□□ -0.38
FYCO1-201ENST00000296137 DDX12PQ92771 950 aa12.69□□□□□ -0.38
FYCO1-201ENST00000296137 APAF1O14727 1248 aa12.69□□□□□ -0.38
FYCO1-201ENST00000296137 CETN2P41208 172 aa12.69□□□□□ -0.38
FYCO1-201ENST00000296137 AEBP2Q6ZN18 517 aaPredicted RBP12.69□□□□□ -0.38
FYCO1-201ENST00000296137 MICAL1Q8TDZ2 1067 aa12.69□□□□□ -0.38
FYCO1-201ENST00000296137 EFCC1Q9HA90 598 aa12.69□□□□□ -0.38
FYCO1-201ENST00000296137 VPS36Q86VN1 386 aa12.68□□□□□ -0.38
FYCO1-201ENST00000296137 PPP6R1Q9UPN7 881 aa12.68□□□□□ -0.38
FYCO1-201ENST00000296137 CCDC129Q6ZRS4 1044 aa12.68□□□□□ -0.38
FYCO1-201ENST00000296137 CERS3Q8IU89 383 aa12.68□□□□□ -0.38
FYCO1-201ENST00000296137 SCAND2PQ9GZW5 306 aaPredicted RBP12.68□□□□□ -0.38
FYCO1-201ENST00000296137 CFAP65Q6ZU64 1925 aaKnown RBP12.68□□□□□ -0.38
FYCO1-201ENST00000296137 MYO10Q9HD67 2058 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms