RNA–Protein interactions for RNA: ENST00000295461.9

NIPAL1-201, Transcript of NIPA like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL1, Length 5,300 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1-201ENST00000295461 SPHKAPQ2M3C7 1700 aa13.96□□□□□ -0.17
NIPAL1-201ENST00000295461 SPG7Q9UQ90 795 aa13.96□□□□□ -0.17
NIPAL1-201ENST00000295461 WDR33Q9C0J8 1336 aaKnown RBP13.96□□□□□ -0.17
NIPAL1-201ENST00000295461 SNX21Q969T3 373 aa13.96□□□□□ -0.17
NIPAL1-201ENST00000295461 EFCAB6Q5THR3 1501 aa13.96□□□□□ -0.18
NIPAL1-201ENST00000295461 KCNH5Q8NCM2 988 aa13.96□□□□□ -0.18
NIPAL1-201ENST00000295461 GDPD2Q9HCC8 539 aa13.96□□□□□ -0.18
NIPAL1-201ENST00000295461 APPP05067 770 aa13.95□□□□□ -0.18
NIPAL1-201ENST00000295461 WASHC4Q2M389 1173 aa13.95□□□□□ -0.18
NIPAL1-201ENST00000295461 PRPF40BQ6NWY9 871 aaKnown RBP13.95□□□□□ -0.18
NIPAL1-201ENST00000295461 CCDC8Q9H0W5 538 aaPredicted RBP13.95□□□□□ -0.18
NIPAL1-201ENST00000295461 PDRG1Q9NUG6 133 aa13.95□□□□□ -0.18
NIPAL1-201ENST00000295461 ISY1Q9ULR0 285 aaKnown RBP13.95□□□□□ -0.18
NIPAL1-201ENST00000295461 RBM27Q9P2N5 1060 aaKnown RBP13.95□□□□□ -0.18
NIPAL1-201ENST00000295461 FAM13BQ9NYF5 915 aa13.95□□□□□ -0.18
NIPAL1-201ENST00000295461 CHPF2Q9P2E5 772 aa13.95□□□□□ -0.18
NIPAL1-201ENST00000295461 RAB11FIP3O75154 756 aa13.94□□□□□ -0.18
NIPAL1-201ENST00000295461 CABP4P57796 275 aa13.94□□□□□ -0.18
NIPAL1-201ENST00000295461 TTC21AQ8NDW8 1320 aa13.94□□□□□ -0.18
NIPAL1-201ENST00000295461 BOLA2Q9H3K6 86 aa13.94□□□□□ -0.18
NIPAL1-201ENST00000295461 NEO1Q92859 1461 aa13.94□□□□□ -0.18
NIPAL1-201ENST00000295461 CEBPZQ03701 1054 aaKnown RBP13.94□□□□□ -0.18
NIPAL1-201ENST00000295461 MLH3Q9UHC1 1453 aa13.94□□□□□ -0.18
NIPAL1-201ENST00000295461 GOLGA6L19H0YKK7 550 aa13.94□□□□□ -0.18
NIPAL1-201ENST00000295461 KDM4AO75164 1064 aa13.94□□□□□ -0.18
NIPAL1-201ENST00000295461 CCDC83Q8IWF9 413 aa13.94□□□□□ -0.18
NIPAL1-201ENST00000295461 STRN4Q9NRL3 753 aa13.94□□□□□ -0.18
NIPAL1-201ENST00000295461 MAP3K2Q9Y2U5 619 aa13.94□□□□□ -0.18
NIPAL1-201ENST00000295461 BECN2A8MW95 431 aa13.93□□□□□ -0.18
NIPAL1-201ENST00000295461 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.93□□□□□ -0.18
NIPAL1-201ENST00000295461 LRRC59Q96AG4 307 aaKnown RBP13.93□□□□□ -0.18
NIPAL1-201ENST00000295461 FLT4P35916 1363 aa13.93□□□□□ -0.18
NIPAL1-201ENST00000295461 GLRX3O76003 335 aaKnown RBP13.93□□□□□ -0.18
NIPAL1-201ENST00000295461 JARID2Q92833 1246 aaPredicted RBP13.93□□□□□ -0.18
NIPAL1-201ENST00000295461 HIP1O00291 1037 aa13.92□□□□□ -0.18
NIPAL1-201ENST00000295461 NCBP3Q53F19 620 aaKnown RBP13.92□□□□□ -0.18
NIPAL1-201ENST00000295461 CCDC39Q9UFE4 941 aa13.92□□□□□ -0.18
NIPAL1-201ENST00000295461 PIK3R4Q99570 1358 aa13.92□□□□□ -0.18
NIPAL1-201ENST00000295461 ZGPATQ8N5A5 531 aaKnown RBP13.92□□□□□ -0.18
NIPAL1-201ENST00000295461 CHL1O00533 1208 aa13.92□□□□□ -0.18
NIPAL1-201ENST00000295461 CPLX1O14810 134 aa13.92□□□□□ -0.18
NIPAL1-201ENST00000295461 RBM25P49756 843 aaKnown RBP13.92□□□□□ -0.18
NIPAL1-201ENST00000295461 TMX3Q96JJ7 454 aa13.92□□□□□ -0.18
NIPAL1-201ENST00000295461 MYD88Q99836 296 aa13.92□□□□□ -0.18
NIPAL1-201ENST00000295461 PHAXQ9H814 394 aaKnown RBP13.92□□□□□ -0.18
NIPAL1-201ENST00000295461 FERMT3Q86UX7 667 aa13.92□□□□□ -0.18
NIPAL1-201ENST00000295461 ABCA6Q8N139 1617 aa13.92□□□□□ -0.18
NIPAL1-201ENST00000295461 LARP1BQ659C4 914 aaKnown RBP13.91□□□□□ -0.18
NIPAL1-201ENST00000295461 DBF4Q9UBU7 674 aaPredicted RBP13.91□□□□□ -0.18
NIPAL1-201ENST00000295461 METP08581 1390 aa13.91□□□□□ -0.18
NIPAL1-201ENST00000295461 RNF17Q9BXT8 1623 aaKnown RBP13.91□□□□□ -0.18
NIPAL1-201ENST00000295461 ATP8B2P98198 1209 aa13.91□□□□□ -0.18
NIPAL1-201ENST00000295461 RHPN1Q8TCX5 695 aa13.91□□□□□ -0.18
NIPAL1-201ENST00000295461 ABCC3O15438 1527 aa13.91□□□□□ -0.18
NIPAL1-201ENST00000295461 ESYT1Q9BSJ8 1104 aa13.91□□□□□ -0.18
NIPAL1-201ENST00000295461 RAB3GAP1Q15042 981 aa13.91□□□□□ -0.18
NIPAL1-201ENST00000295461 CCDC85AQ96PX6 553 aaPredicted RBP13.91□□□□□ -0.18
NIPAL1-201ENST00000295461 USP26Q9BXU7 913 aa13.91□□□□□ -0.18
NIPAL1-201ENST00000295461 KCNA6P17658 529 aa13.9□□□□□ -0.18
NIPAL1-201ENST00000295461 BLOC1S2Q6QNY1 142 aa13.9□□□□□ -0.18
NIPAL1-201ENST00000295461 SASS6Q6UVJ0 657 aa13.9□□□□□ -0.18
NIPAL1-201ENST00000295461 TOM1L2Q6ZVM7 507 aa13.9□□□□□ -0.18
NIPAL1-201ENST00000295461 FAM177BA6PVY3 158 aa13.89□□□□□ -0.19
NIPAL1-201ENST00000295461 HOXC9P31274 260 aa13.89□□□□□ -0.19
NIPAL1-201ENST00000295461 AMOTQ4VCS5 1084 aa13.89□□□□□ -0.19
NIPAL1-201ENST00000295461 HECW2Q9P2P5 1572 aa13.89□□□□□ -0.19
NIPAL1-201ENST00000295461 BCL11BQ9C0K0 894 aaPredicted RBP13.89□□□□□ -0.19
NIPAL1-201ENST00000295461 TPM4P67936 248 aa13.89□□□□□ -0.19
NIPAL1-201ENST00000295461 SPC24Q8NBT2 197 aa13.89□□□□□ -0.19
NIPAL1-201ENST00000295461 ABCC4O15439 1325 aa13.89□□□□□ -0.19
NIPAL1-201ENST00000295461 LRRFIP1Q32MZ4 808 aaKnown RBP13.88□□□□□ -0.19
NIPAL1-201ENST00000295461 ANKRD24Q8TF21 1146 aa13.88□□□□□ -0.19
NIPAL1-201ENST00000295461 LTKP29376 864 aa13.88□□□□□ -0.19
NIPAL1-201ENST00000295461 GTF2E1P29083 439 aaPredicted RBP13.88□□□□□ -0.19
NIPAL1-201ENST00000295461 ZNF592Q92610 1267 aa13.88□□□□□ -0.19
NIPAL1-201ENST00000295461 GSPT1P15170 499 aaKnown RBP13.88□□□□□ -0.19
NIPAL1-201ENST00000295461 KLHL40Q2TBA0 621 aa13.88□□□□□ -0.19
NIPAL1-201ENST00000295461 PA2G4Q9UQ80 394 aaKnown RBP13.88□□□□□ -0.19
NIPAL1-201ENST00000295461 SLC39A6Q13433 755 aa13.88□□□□□ -0.19
NIPAL1-201ENST00000295461 PTCD1O75127 700 aaKnown RBP13.87□□□□□ -0.19
NIPAL1-201ENST00000295461 PDCP20941 246 aa13.87□□□□□ -0.19
NIPAL1-201ENST00000295461 PIP4K2AP48426 406 aaPredicted RBP13.87□□□□□ -0.19
NIPAL1-201ENST00000295461 TRDNQ13061 729 aa13.87□□□□□ -0.19
NIPAL1-201ENST00000295461 ARAP3Q8WWN8 1544 aa13.87□□□□□ -0.19
NIPAL1-201ENST00000295461 CFAP74Q9C0B2 1584 aa13.87□□□□□ -0.19
NIPAL1-201ENST00000295461 ZSCAN23Q3MJ62 389 aa13.87□□□□□ -0.19
NIPAL1-201ENST00000295461 LARP1Q6PKG0 1096 aaKnown RBP13.87□□□□□ -0.19
NIPAL1-201ENST00000295461 CCDC73Q6ZRK6 1079 aa13.87□□□□□ -0.19
NIPAL1-201ENST00000295461 RALYLQ86SE5 291 aaKnown RBP13.87□□□□□ -0.19
NIPAL1-201ENST00000295461 DDX11Q96FC9 970 aa13.87□□□□□ -0.19
NIPAL1-201ENST00000295461 ECHDC1Q9NTX5 307 aa13.87□□□□□ -0.19
NIPAL1-201ENST00000295461 LAMC1P11047 1609 aa13.86□□□□□ -0.19
NIPAL1-201ENST00000295461 KRT28Q7Z3Y7 464 aa13.86□□□□□ -0.19
NIPAL1-201ENST00000295461 USP19O94966 1318 aa13.86□□□□□ -0.19
NIPAL1-201ENST00000295461 RBM10P98175 930 aaKnown RBP13.86□□□□□ -0.19
NIPAL1-201ENST00000295461 NFXL1Q6ZNB6 911 aa13.86□□□□□ -0.19
NIPAL1-201ENST00000295461 PNMA6EA0A0J9YXQ4 647 aa13.86□□□□□ -0.19
NIPAL1-201ENST00000295461 FKBP4Q02790 459 aaKnown RBP eCLIP13.86□□□□□ -0.19
NIPAL1-201ENST00000295461 PRDM11Q9NQV5 511 aa13.86□□□□□ -0.19
NIPAL1-201ENST00000295461 MAP3K5Q99683 1374 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms