RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 ELL2O00472 640 aaPredicted RBP11.61□□□□□ -0.55
PDPN-201ENST00000294489 MIS18AQ9NYP9 233 aa11.61□□□□□ -0.55
PDPN-201ENST00000294489 PCDHB15Q9Y5E8 787 aa11.61□□□□□ -0.55
PDPN-201ENST00000294489 PTPRCP08575 1304 aa11.61□□□□□ -0.55
PDPN-201ENST00000294489 RGS3P49796 1198 aa11.61□□□□□ -0.55
PDPN-201ENST00000294489 TMEM57Q8N5G2 664 aa11.61□□□□□ -0.55
PDPN-201ENST00000294489 HOXB7P09629 217 aa11.6□□□□□ -0.55
PDPN-201ENST00000294489 CHMP4BQ9H444 224 aaKnown RBP11.6□□□□□ -0.55
PDPN-201ENST00000294489 UBR2Q8IWV8 1755 aa11.6□□□□□ -0.55
PDPN-201ENST00000294489 GLI3P10071 1580 aa11.6□□□□□ -0.55
PDPN-201ENST00000294489 TATP17735 454 aaPredicted RBP11.6□□□□□ -0.55
PDPN-201ENST00000294489 API5Q9BZZ5 524 aaKnown RBP11.6□□□□□ -0.55
PDPN-201ENST00000294489 ZBTB40Q9NUA8 1239 aa11.6□□□□□ -0.55
PDPN-201ENST00000294489 NLRP2Q9NX02 1062 aa11.6□□□□□ -0.55
PDPN-201ENST00000294489 C1orf141Q5JVX7 400 aa11.6□□□□□ -0.55
PDPN-201ENST00000294489 PRDM11Q9NQV5 511 aa11.6□□□□□ -0.55
PDPN-201ENST00000294489 PLEKHG5O94827 1062 aa11.59□□□□□ -0.55
PDPN-201ENST00000294489 PHKG2P15735 406 aa11.59□□□□□ -0.55
PDPN-201ENST00000294489 RAPGEF4Q8WZA2 1011 aa11.59□□□□□ -0.55
PDPN-201ENST00000294489 CARD10Q9BWT7 1032 aa11.59□□□□□ -0.55
PDPN-201ENST00000294489 SPG7Q9UQ90 795 aa11.59□□□□□ -0.55
PDPN-201ENST00000294489 C5P01031 1676 aa11.59□□□□□ -0.55
PDPN-201ENST00000294489 NWD2Q9ULI1 1742 aa11.59□□□□□ -0.55
PDPN-201ENST00000294489 EIF4A1P60842 406 aaKnown RBP11.59□□□□□ -0.55
PDPN-201ENST00000294489 FAM161AQ3B820 660 aa11.58□□□□□ -0.56
PDPN-201ENST00000294489 INTS3Q68E01 1043 aaKnown RBP11.58□□□□□ -0.56
PDPN-201ENST00000294489 PXDNLA1KZ92 1463 aa11.58□□□□□ -0.56
PDPN-201ENST00000294489 ZBTB7BO15156 539 aaPredicted RBP11.58□□□□□ -0.56
PDPN-201ENST00000294489 LAMB4A4D0S4 1761 aa11.58□□□□□ -0.56
PDPN-201ENST00000294489 HDAC1Q13547 482 aaPredicted RBP11.58□□□□□ -0.56
PDPN-201ENST00000294489 MPRIPQ6WCQ1 1025 aa11.58□□□□□ -0.56
PDPN-201ENST00000294489 DISP2A7MBM2 1401 aa11.57□□□□□ -0.56
PDPN-201ENST00000294489 TOGARAM1Q9Y4F4 1720 aa11.57□□□□□ -0.56
PDPN-201ENST00000294489 MSH5O43196 834 aa11.57□□□□□ -0.56
PDPN-201ENST00000294489 CSB-PGBD3P0DP91 1061 aa11.56□□□□□ -0.56
PDPN-201ENST00000294489 NKX1-1Q15270 411 aaPredicted RBP11.56□□□□□ -0.56
PDPN-201ENST00000294489 CCDC30Q5VVM6 783 aa11.56□□□□□ -0.56
PDPN-201ENST00000294489 IFNL2Q8IZJ0 200 aa11.56□□□□□ -0.56
PDPN-201ENST00000294489 LRP6O75581 1613 aa11.56□□□□□ -0.56
PDPN-201ENST00000294489 CYP27B1O15528 508 aa11.55□□□□□ -0.56
PDPN-201ENST00000294489 IPO9Q96P70 1041 aaKnown RBP11.55□□□□□ -0.56
PDPN-201ENST00000294489 BCL11AQ9H165 835 aa11.55□□□□□ -0.56
PDPN-201ENST00000294489 BTBD11A6QL63 1104 aa11.55□□□□□ -0.56
PDPN-201ENST00000294489 TEFQ10587 303 aa11.55□□□□□ -0.56
PDPN-201ENST00000294489 NPM2Q86SE8 214 aaKnown RBP11.55□□□□□ -0.56
PDPN-201ENST00000294489 DCAF5Q96JK2 942 aa11.55□□□□□ -0.56
PDPN-201ENST00000294489 SLC52A2Q9HAB3 445 aa11.55□□□□□ -0.56
PDPN-201ENST00000294489 HSP90AB1P08238 724 aaKnown RBP11.55□□□□□ -0.56
PDPN-201ENST00000294489 CHMP4AQ9BY43 222 aa11.55□□□□□ -0.56
PDPN-201ENST00000294489 SLC4A2P04920 1241 aa11.54□□□□□ -0.56
PDPN-201ENST00000294489 PDZRN3Q9UPQ7 1066 aa11.54□□□□□ -0.56
PDPN-201ENST00000294489 PCDH11XQ9BZA7 1347 aa11.53□□□□□ -0.56
PDPN-201ENST00000294489 PCDH11YQ9BZA8 1340 aa11.53□□□□□ -0.56
PDPN-201ENST00000294489 KCNQ3O43525 872 aa11.53□□□□□ -0.56
PDPN-201ENST00000294489 C8orf34Q49A92 452 aa11.53□□□□□ -0.56
PDPN-201ENST00000294489 LARP1Q6PKG0 1096 aaKnown RBP11.53□□□□□ -0.56
PDPN-201ENST00000294489 TOM1L2Q6ZVM7 507 aa11.53□□□□□ -0.56
PDPN-201ENST00000294489 TOM1O60784 492 aa11.53□□□□□ -0.56
PDPN-201ENST00000294489 IL2RBP14784 551 aa11.53□□□□□ -0.56
PDPN-201ENST00000294489 G2E3Q7L622 706 aa11.53□□□□□ -0.56
PDPN-201ENST00000294489 ITGB4P16144 1822 aa11.52□□□□□ -0.57
PDPN-201ENST00000294489 GIGYF1O75420 1035 aaPredicted RBP11.52□□□□□ -0.57
PDPN-201ENST00000294489 ZCRB1Q8TBF4 217 aaKnown RBP11.52□□□□□ -0.57
PDPN-201ENST00000294489 ANP32EQ9BTT0 268 aa11.52□□□□□ -0.57
PDPN-201ENST00000294489 STK31Q9BXU1 1019 aa11.52□□□□□ -0.57
PDPN-201ENST00000294489 SMC5Q8IY18 1101 aa11.51□□□□□ -0.57
PDPN-201ENST00000294489 NOP58Q9Y2X3 529 aaKnown RBP11.51□□□□□ -0.57
PDPN-201ENST00000294489 KCPQ6ZWJ8 1503 aa11.51□□□□□ -0.57
PDPN-201ENST00000294489 IBTKQ9P2D0 1353 aaPredicted RBP11.51□□□□□ -0.57
PDPN-201ENST00000294489 ATP10DQ9P241 1426 aa11.51□□□□□ -0.57
PDPN-201ENST00000294489 ZBTB47Q9UFB7 747 aaPredicted RBP11.51□□□□□ -0.57
PDPN-201ENST00000294489 TNS2Q63HR2 1409 aa11.51□□□□□ -0.57
PDPN-201ENST00000294489 SLIT2O94813 1529 aa11.51□□□□□ -0.57
PDPN-201ENST00000294489 FLIIQ13045 1269 aa11.51□□□□□ -0.57
PDPN-201ENST00000294489 ERVV-2B6SEH9 535 aa11.5□□□□□ -0.57
PDPN-201ENST00000294489 CCT4P50991 539 aaKnown RBP11.5□□□□□ -0.57
PDPN-201ENST00000294489 HDGFL1Q5TGJ6 251 aa11.5□□□□□ -0.57
PDPN-201ENST00000294489 ZNF790Q6PG37 636 aa11.5□□□□□ -0.57
PDPN-201ENST00000294489 BTG4Q9NY30 223 aa11.5□□□□□ -0.57
PDPN-201ENST00000294489 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.5□□□□□ -0.57
PDPN-201ENST00000294489 EVA1CP58658 441 aa11.49□□□□□ -0.57
PDPN-201ENST00000294489 DDRGK1Q96HY6 314 aa11.49□□□□□ -0.57
PDPN-201ENST00000294489 SIRT2Q8IXJ6 389 aa11.49□□□□□ -0.57
PDPN-201ENST00000294489 NFATC2IPQ8NCF5 419 aa11.49□□□□□ -0.57
PDPN-201ENST00000294489 GCC1Q96CN9 775 aa11.48□□□□□ -0.57
PDPN-201ENST00000294489 STRN4Q9NRL3 753 aa11.47□□□□□ -0.57
PDPN-201ENST00000294489 DBF4Q9UBU7 674 aaPredicted RBP11.47□□□□□ -0.57
PDPN-201ENST00000294489 CICQ96RK0 1608 aaPredicted RBP11.47□□□□□ -0.57
PDPN-201ENST00000294489 PDIA6Q15084 440 aa11.47□□□□□ -0.57
PDPN-201ENST00000294489 CHPF2Q9P2E5 772 aa11.47□□□□□ -0.57
PDPN-201ENST00000294489 C1orf115Q9H7X2 142 aa11.46□□□□□ -0.57
PDPN-201ENST00000294489 ADCY9O60503 1353 aa11.46□□□□□ -0.57
PDPN-201ENST00000294489 NUP188Q5SRE5 1749 aa11.46□□□□□ -0.57
PDPN-201ENST00000294489 NUCB1Q02818 461 aa11.46□□□□□ -0.57
PDPN-201ENST00000294489 PHAXQ9H814 394 aaKnown RBP11.46□□□□□ -0.57
PDPN-201ENST00000294489 THRAP3Q9Y2W1 955 aaKnown RBP11.46□□□□□ -0.57
PDPN-201ENST00000294489 ANKRD44Q8N8A2 993 aa11.46□□□□□ -0.58
PDPN-201ENST00000294489 ARFGEF2Q9Y6D5 1785 aa11.46□□□□□ -0.58
PDPN-201ENST00000294489 F6X3S4 739 aa11.45□□□□□ -0.58
PDPN-201ENST00000294489 CABP4P57796 275 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms