RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 TAF1LQ8IZX4 1826 aa12.99□□□□□ -0.33
HMHB1-201ENST00000289448 PHF14O94880 888 aa12.98□□□□□ -0.33
HMHB1-201ENST00000289448 KLHL34Q8N239 644 aa12.98□□□□□ -0.33
HMHB1-201ENST00000289448 AK7Q96M32 723 aa12.98□□□□□ -0.33
HMHB1-201ENST00000289448 C4BP0C0L5 1744 aa12.98□□□□□ -0.33
HMHB1-201ENST00000289448 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.97□□□□□ -0.33
HMHB1-201ENST00000289448 HSP90AB1P08238 724 aaKnown RBP12.97□□□□□ -0.33
HMHB1-201ENST00000289448 ATP6V1AP38606 617 aa12.97□□□□□ -0.33
HMHB1-201ENST00000289448 CNGB1Q14028 1251 aaPredicted RBP12.97□□□□□ -0.33
HMHB1-201ENST00000289448 FLAD1Q8NFF5 587 aa12.97□□□□□ -0.33
HMHB1-201ENST00000289448 HMOX1P09601 288 aa12.95□□□□□ -0.34
HMHB1-201ENST00000289448 HMGB2P26583 209 aaKnown RBP12.95□□□□□ -0.34
HMHB1-201ENST00000289448 CABP4P57796 275 aa12.95□□□□□ -0.34
HMHB1-201ENST00000289448 C1orf141Q5JVX7 400 aa12.95□□□□□ -0.34
HMHB1-201ENST00000289448 NPC1L1Q9UHC9 1359 aa12.94□□□□□ -0.34
HMHB1-201ENST00000289448 UBR3Q6ZT12 1888 aa12.94□□□□□ -0.34
HMHB1-201ENST00000289448 GNPATO15228 680 aa12.94□□□□□ -0.34
HMHB1-201ENST00000289448 SSFA2P28290 1259 aa12.94□□□□□ -0.34
HMHB1-201ENST00000289448 NFATC2IPQ8NCF5 419 aa12.94□□□□□ -0.34
HMHB1-201ENST00000289448 RBM42Q9BTD8 480 aaKnown RBP12.94□□□□□ -0.34
HMHB1-201ENST00000289448 DIAPH1O60610 1272 aaKnown RBP12.93□□□□□ -0.34
HMHB1-201ENST00000289448 GPR162Q16538 588 aa12.93□□□□□ -0.34
HMHB1-201ENST00000289448 LGR6Q9HBX8 967 aa12.93□□□□□ -0.34
HMHB1-201ENST00000289448 COL3A1P02461 1466 aaPredicted RBP12.92□□□□□ -0.34
HMHB1-201ENST00000289448 PTCD1O75127 700 aaKnown RBP12.92□□□□□ -0.34
HMHB1-201ENST00000289448 MTHFSDQ2M296 383 aaKnown RBP12.92□□□□□ -0.34
HMHB1-201ENST00000289448 AKAP4Q5JQC9 854 aa12.92□□□□□ -0.34
HMHB1-201ENST00000289448 YBX3P16989 372 aaKnown RBP eCLIP12.91□□□□□ -0.34
HMHB1-201ENST00000289448 PELP1Q8IZL8 1130 aaKnown RBP12.91□□□□□ -0.34
HMHB1-201ENST00000289448 RNMTO43148 476 aaKnown RBP12.9□□□□□ -0.34
HMHB1-201ENST00000289448 RC3H1Q5TC82 1133 aaKnown RBP12.9□□□□□ -0.34
HMHB1-201ENST00000289448 SLC52A2Q9HAB3 445 aa12.9□□□□□ -0.34
HMHB1-201ENST00000289448 CD2APQ9Y5K6 639 aa12.9□□□□□ -0.34
HMHB1-201ENST00000289448 ZNF784Q8NCA9 323 aaPredicted RBP12.89□□□□□ -0.35
HMHB1-201ENST00000289448 ARHGEF1Q92888 912 aaKnown RBP12.89□□□□□ -0.35
HMHB1-201ENST00000289448 RTCBQ9Y3I0 505 aaKnown RBP12.89□□□□□ -0.35
HMHB1-201ENST00000289448 ZNF831Q5JPB2 1677 aa12.89□□□□□ -0.35
HMHB1-201ENST00000289448 CNTNAP4Q9C0A0 1308 aa12.88□□□□□ -0.35
HMHB1-201ENST00000289448 U2SURPO15042 1029 aaKnown RBP12.88□□□□□ -0.35
HMHB1-201ENST00000289448 RPS6KA4O75676 772 aa12.88□□□□□ -0.35
HMHB1-201ENST00000289448 SLC39A6Q13433 755 aa12.88□□□□□ -0.35
HMHB1-201ENST00000289448 TRAPPC3LQ5T215 181 aa12.88□□□□□ -0.35
HMHB1-201ENST00000289448 MYH14Q7Z406 1995 aaKnown RBP12.87□□□□□ -0.35
HMHB1-201ENST00000289448 MMP10P09238 476 aa12.87□□□□□ -0.35
HMHB1-201ENST00000289448 CRKLP46109 303 aaKnown RBP12.87□□□□□ -0.35
HMHB1-201ENST00000289448 SCN11AQ9UI33 1791 aa12.86□□□□□ -0.35
HMHB1-201ENST00000289448 MRC1P22897 1456 aa12.86□□□□□ -0.35
HMHB1-201ENST00000289448 COL5A3P25940 1745 aaPredicted RBP12.86□□□□□ -0.35
HMHB1-201ENST00000289448 GYS1P13807 737 aa12.86□□□□□ -0.35
HMHB1-201ENST00000289448 ADRA2BP18089 450 aa12.86□□□□□ -0.35
HMHB1-201ENST00000289448 INTS5Q6P9B9 1019 aaKnown RBP12.86□□□□□ -0.35
HMHB1-201ENST00000289448 DNAJC10Q8IXB1 793 aa12.86□□□□□ -0.35
HMHB1-201ENST00000289448 PPP2R1AP30153 589 aa12.85□□□□□ -0.35
HMHB1-201ENST00000289448 IL17REQ8NFR9 667 aa12.85□□□□□ -0.35
HMHB1-201ENST00000289448 WWC3Q9ULE0 1092 aa12.85□□□□□ -0.35
HMHB1-201ENST00000289448 CHD4Q14839 1912 aa12.84□□□□□ -0.35
HMHB1-201ENST00000289448 ADAMTS7Q9UKP4 1686 aa12.84□□□□□ -0.35
HMHB1-201ENST00000289448 GRIN3BO60391 1043 aa12.84□□□□□ -0.35
HMHB1-201ENST00000289448 RFC4P35249 363 aa12.84□□□□□ -0.35
HMHB1-201ENST00000289448 PHACTR3Q96KR7 559 aa12.84□□□□□ -0.35
HMHB1-201ENST00000289448 SRP68Q9UHB9 627 aaKnown RBP12.84□□□□□ -0.35
HMHB1-201ENST00000289448 KCPQ6ZWJ8 1503 aa12.83□□□□□ -0.35
HMHB1-201ENST00000289448 TJP1Q07157 1748 aa12.83□□□□□ -0.36
HMHB1-201ENST00000289448 CYP19A1P11511 503 aaPredicted RBP12.83□□□□□ -0.36
HMHB1-201ENST00000289448 NLGN1Q8N2Q7 840 aa12.83□□□□□ -0.36
HMHB1-201ENST00000289448 RSPH6AQ9H0K4 717 aa12.83□□□□□ -0.36
HMHB1-201ENST00000289448 PRKAR2BP31323 418 aa12.82□□□□□ -0.36
HMHB1-201ENST00000289448 FKBP8Q14318 412 aa12.82□□□□□ -0.36
HMHB1-201ENST00000289448 CICQ96RK0 1608 aaPredicted RBP12.81□□□□□ -0.36
HMHB1-201ENST00000289448 GNAT3A8MTJ3 354 aa12.81□□□□□ -0.36
HMHB1-201ENST00000289448 GAS2L2Q8NHY3 880 aa12.81□□□□□ -0.36
HMHB1-201ENST00000289448 CFAP53Q96M91 514 aa12.81□□□□□ -0.36
HMHB1-201ENST00000289448 CCDC87Q9NVE4 849 aa12.81□□□□□ -0.36
HMHB1-201ENST00000289448 USP42Q9H9J4 1324 aaKnown RBP12.81□□□□□ -0.36
HMHB1-201ENST00000289448 PXDNLA1KZ92 1463 aa12.8□□□□□ -0.36
HMHB1-201ENST00000289448 A0A0G2JLW4 131 aa12.8□□□□□ -0.36
HMHB1-201ENST00000289448 DDR1Q08345 913 aa12.8□□□□□ -0.36
HMHB1-201ENST00000289448 SOS1Q07889 1333 aaPredicted RBP12.8□□□□□ -0.36
HMHB1-201ENST00000289448 C10orf71Q711Q0 1435 aa12.79□□□□□ -0.36
HMHB1-201ENST00000289448 C4AP0C0L4 1744 aa12.79□□□□□ -0.36
HMHB1-201ENST00000289448 U2AF1L5P0DN76 240 aaPredicted RBP12.79□□□□□ -0.36
HMHB1-201ENST00000289448 U2AF1Q01081 240 aaKnown RBP eCLIP12.79□□□□□ -0.36
HMHB1-201ENST00000289448 VSIG10Q8N0Z9 540 aa12.79□□□□□ -0.36
HMHB1-201ENST00000289448 ZNF496Q96IT1 587 aaPredicted RBP12.79□□□□□ -0.36
HMHB1-201ENST00000289448 ZBTB1Q9Y2K1 713 aa12.79□□□□□ -0.36
HMHB1-201ENST00000289448 CEMIPQ8WUJ3 1361 aa12.79□□□□□ -0.36
HMHB1-201ENST00000289448 KCNQ3O43525 872 aa12.78□□□□□ -0.36
HMHB1-201ENST00000289448 TM4SF1P30408 202 aa12.78□□□□□ -0.36
HMHB1-201ENST00000289448 TEFQ10587 303 aa12.78□□□□□ -0.36
HMHB1-201ENST00000289448 USPL1Q5W0Q7 1092 aa12.78□□□□□ -0.36
HMHB1-201ENST00000289448 ZNF790Q6PG37 636 aa12.78□□□□□ -0.36
HMHB1-201ENST00000289448 NUDCQ9Y266 331 aa12.78□□□□□ -0.36
HMHB1-201ENST00000289448 PARP3Q9Y6F1 533 aa12.78□□□□□ -0.36
HMHB1-201ENST00000289448 CEP350Q5VT06 3117 aa12.78□□□□□ -0.36
HMHB1-201ENST00000289448 VIRMAQ69YN4 1812 aaKnown RBP12.78□□□□□ -0.36
HMHB1-201ENST00000289448 KIAA1551Q9HCM1 1747 aa12.77□□□□□ -0.36
HMHB1-201ENST00000289448 FCHSD2O94868 740 aa12.77□□□□□ -0.37
HMHB1-201ENST00000289448 DPEP1P16444 411 aa12.77□□□□□ -0.37
HMHB1-201ENST00000289448 KCNA3P22001 575 aa12.77□□□□□ -0.37
HMHB1-201ENST00000289448 TGFB2P61812 414 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms