RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 ADAMTS12P58397 1594 aa20.58■□□□□ 0.88
PCDHA13-201ENST00000289272 SHTN1A0MZ66 631 aa20.57■□□□□ 0.88
PCDHA13-201ENST00000289272 SLC26A8Q96RN1 970 aa20.57■□□□□ 0.88
PCDHA13-201ENST00000289272 MAGEC2Q9UBF1 373 aaPredicted RBP20.57■□□□□ 0.88
PCDHA13-201ENST00000289272 SFPQP23246 707 aaKnown RBP eCLIP20.57■□□□□ 0.88
PCDHA13-201ENST00000289272 ASXL1Q8IXJ9 1541 aa20.57■□□□□ 0.88
PCDHA13-201ENST00000289272 NAP1L1P55209 391 aaKnown RBP20.57■□□□□ 0.88
PCDHA13-201ENST00000289272 WAPLQ7Z5K2 1190 aa20.57■□□□□ 0.88
PCDHA13-201ENST00000289272 TNNT1P13805 278 aa20.56■□□□□ 0.88
PCDHA13-201ENST00000289272 CABP4P57796 275 aa20.56■□□□□ 0.88
PCDHA13-201ENST00000289272 PDRG1Q9NUG6 133 aa20.56■□□□□ 0.88
PCDHA13-201ENST00000289272 GIMAP7Q8NHV1 300 aa20.56■□□□□ 0.88
PCDHA13-201ENST00000289272 FEZ1Q99689 392 aa20.56■□□□□ 0.88
PCDHA13-201ENST00000289272 PLCH2O75038 1416 aa20.56■□□□□ 0.88
PCDHA13-201ENST00000289272 ERICH4A6NGS2 130 aa20.56■□□□□ 0.88
PCDHA13-201ENST00000289272 ARHGEF12Q9NZN5 1544 aa20.56■□□□□ 0.88
PCDHA13-201ENST00000289272 IDI1Q13907 227 aa20.55■□□□□ 0.88
PCDHA13-201ENST00000289272 TOM1L2Q6ZVM7 507 aa20.55■□□□□ 0.88
PCDHA13-201ENST00000289272 CTR9Q6PD62 1173 aa20.55■□□□□ 0.88
PCDHA13-201ENST00000289272 SSFA2P28290 1259 aa20.55■□□□□ 0.88
PCDHA13-201ENST00000289272 MICALCLQ6ZW33 695 aa20.55■□□□□ 0.88
PCDHA13-201ENST00000289272 KDM5BQ9UGL1 1544 aa20.55■□□□□ 0.88
PCDHA13-201ENST00000289272 PATL2C9JE40 543 aaKnown RBP20.55■□□□□ 0.88
PCDHA13-201ENST00000289272 FBXW7Q969H0 707 aa20.55■□□□□ 0.88
PCDHA13-201ENST00000289272 TRIM27P14373 513 aa20.54■□□□□ 0.88
PCDHA13-201ENST00000289272 INCENPQ9NQS7 918 aa20.54■□□□□ 0.88
PCDHA13-201ENST00000289272 SHANK2Q9UPX8 1470 aa20.54■□□□□ 0.88
PCDHA13-201ENST00000289272 TXLNAP40222 546 aa20.54■□□□□ 0.88
PCDHA13-201ENST00000289272 WASHC4Q2M389 1173 aa20.54■□□□□ 0.88
PCDHA13-201ENST00000289272 CCDC148Q8NFR7 591 aa20.54■□□□□ 0.88
PCDHA13-201ENST00000289272 PRDM10Q9NQV6 1147 aa20.54■□□□□ 0.88
PCDHA13-201ENST00000289272 SYCP2Q9BX26 1530 aa20.54■□□□□ 0.88
PCDHA13-201ENST00000289272 SART3Q15020 963 aaKnown RBP20.54■□□□□ 0.88
PCDHA13-201ENST00000289272 ZSCAN23Q3MJ62 389 aa20.54■□□□□ 0.88
PCDHA13-201ENST00000289272 TCEAL9Q9UHQ7 104 aa20.53■□□□□ 0.88
PCDHA13-201ENST00000289272 KIF20AO95235 890 aa20.53■□□□□ 0.88
PCDHA13-201ENST00000289272 PRDM11Q9NQV5 511 aa20.53■□□□□ 0.88
PCDHA13-201ENST00000289272 BLOC1S2Q6QNY1 142 aa20.53■□□□□ 0.88
PCDHA13-201ENST00000289272 ME1P48163 572 aa20.53■□□□□ 0.88
PCDHA13-201ENST00000289272 TEX14Q8IWB6 1497 aa20.53■□□□□ 0.88
PCDHA13-201ENST00000289272 HDAC1Q13547 482 aaPredicted RBP20.52■□□□□ 0.88
PCDHA13-201ENST00000289272 IVLP07476 585 aa20.52■□□□□ 0.88
PCDHA13-201ENST00000289272 STRN4Q9NRL3 753 aa20.52■□□□□ 0.88
PCDHA13-201ENST00000289272 EIF2AK4Q9P2K8 1649 aaKnown RBP20.52■□□□□ 0.87
PCDHA13-201ENST00000289272 IL16Q14005 1332 aa20.51■□□□□ 0.87
PCDHA13-201ENST00000289272 NME9Q86XW9 330 aa20.51■□□□□ 0.87
PCDHA13-201ENST00000289272 CDKL5O76039 1030 aa20.51■□□□□ 0.87
PCDHA13-201ENST00000289272 FOSBP53539 338 aa20.51■□□□□ 0.87
PCDHA13-201ENST00000289272 TUBB4BP68371 445 aa20.51■□□□□ 0.87
PCDHA13-201ENST00000289272 JAKMIP3Q5VZ66 844 aa20.51■□□□□ 0.87
PCDHA13-201ENST00000289272 RBM42Q9BTD8 480 aaKnown RBP20.51■□□□□ 0.87
PCDHA13-201ENST00000289272 GNL3LQ9NVN8 582 aaKnown RBP20.51■□□□□ 0.87
PCDHA13-201ENST00000289272 ANKRD36BQ8N2N9 1353 aa20.51■□□□□ 0.87
PCDHA13-201ENST00000289272 CCDC102AQ96A19 550 aa20.51■□□□□ 0.87
PCDHA13-201ENST00000289272 CLIP2Q9UDT6 1046 aa20.51■□□□□ 0.87
PCDHA13-201ENST00000289272 DNMT1P26358 1616 aaKnown RBP20.51■□□□□ 0.87
PCDHA13-201ENST00000289272 CCDC83Q8IWF9 413 aa20.5■□□□□ 0.87
PCDHA13-201ENST00000289272 TESK2Q96S53 571 aa20.5■□□□□ 0.87
PCDHA13-201ENST00000289272 SRGAP3O43295 1099 aa20.5■□□□□ 0.87
PCDHA13-201ENST00000289272 RAB11FIP3O75154 756 aa20.5■□□□□ 0.87
PCDHA13-201ENST00000289272 ADCY5O95622 1261 aa20.5■□□□□ 0.87
PCDHA13-201ENST00000289272 IGHDP01880 384 aa20.5■□□□□ 0.87
PCDHA13-201ENST00000289272 UBE2HP62256 183 aa20.5■□□□□ 0.87
PCDHA13-201ENST00000289272 STIM1Q13586 685 aa20.5■□□□□ 0.87
PCDHA13-201ENST00000289272 C8orf34Q49A92 452 aa20.5■□□□□ 0.87
PCDHA13-201ENST00000289272 EMILIN1Q9Y6C2 1016 aa20.5■□□□□ 0.87
PCDHA13-201ENST00000289272 GNAT3A8MTJ3 354 aa20.5■□□□□ 0.87
PCDHA13-201ENST00000289272 MCM10Q7L590 875 aa20.5■□□□□ 0.87
PCDHA13-201ENST00000289272 CRACR2AQ9BSW2 395 aa20.5■□□□□ 0.87
PCDHA13-201ENST00000289272 SMC5Q8IY18 1101 aa20.49■□□□□ 0.87
PCDHA13-201ENST00000289272 INSRP06213 1382 aa20.49■□□□□ 0.87
PCDHA13-201ENST00000289272 CCDC150Q8NCX0 1101 aa20.49■□□□□ 0.87
PCDHA13-201ENST00000289272 PZPP20742 1482 aa20.49■□□□□ 0.87
PCDHA13-201ENST00000289272 NOLC1Q14978 699 aaKnown RBP eCLIP20.49■□□□□ 0.87
PCDHA13-201ENST00000289272 CCDC181Q5TID7 509 aa20.49■□□□□ 0.87
PCDHA13-201ENST00000289272 WASLO00401 505 aaPredicted RBP20.49■□□□□ 0.87
PCDHA13-201ENST00000289272 SLC3A2P08195 630 aaKnown RBP20.48■□□□□ 0.87
PCDHA13-201ENST00000289272 FMNL2Q96PY5 1086 aa20.48■□□□□ 0.87
PCDHA13-201ENST00000289272 SRRTQ9BXP5 876 aaKnown RBP20.48■□□□□ 0.87
PCDHA13-201ENST00000289272 CASQ1P31415 396 aa20.48■□□□□ 0.87
PCDHA13-201ENST00000289272 USP25Q9UHP3 1055 aa20.48■□□□□ 0.87
PCDHA13-201ENST00000289272 HSP90AB3PQ58FF7 597 aa20.47■□□□□ 0.87
PCDHA13-201ENST00000289272 CCDC158Q5M9N0 1113 aa20.47■□□□□ 0.87
PCDHA13-201ENST00000289272 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.47■□□□□ 0.87
PCDHA13-201ENST00000289272 ZHX1Q9UKY1 873 aaPredicted RBP20.47■□□□□ 0.87
PCDHA13-201ENST00000289272 KIF21AQ7Z4S6 1674 aa20.46■□□□□ 0.87
PCDHA13-201ENST00000289272 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.46■□□□□ 0.87
PCDHA13-201ENST00000289272 EXOC6BQ9Y2D4 811 aa20.46■□□□□ 0.87
PCDHA13-201ENST00000289272 IL1RAPL2Q9NP60 686 aa20.46■□□□□ 0.87
PCDHA13-201ENST00000289272 EPB41L2O43491 1005 aaKnown RBP20.46■□□□□ 0.87
PCDHA13-201ENST00000289272 KIF5CO60282 957 aa20.46■□□□□ 0.87
PCDHA13-201ENST00000289272 RAB3GAP1Q15042 981 aa20.45■□□□□ 0.86
PCDHA13-201ENST00000289272 ARHGAP29Q52LW3 1261 aa20.45■□□□□ 0.86
PCDHA13-201ENST00000289272 OGFRQ9NZT2 677 aa20.45■□□□□ 0.86
PCDHA13-201ENST00000289272 MAP4K4O95819 1239 aaPredicted RBP20.45■□□□□ 0.86
PCDHA13-201ENST00000289272 AMOTQ4VCS5 1084 aa20.45■□□□□ 0.86
PCDHA13-201ENST00000289272 CEP135Q66GS9 1140 aa20.45■□□□□ 0.86
PCDHA13-201ENST00000289272 MIS18AQ9NYP9 233 aa20.45■□□□□ 0.86
PCDHA13-201ENST00000289272 UHRF1BP1Q6BDS2 1440 aa20.45■□□□□ 0.86
PCDHA13-201ENST00000289272 EPS15P42566 896 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms