RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 MX1P20591 662 aa14.27□□□□□ -0.12
ERBB2-201ENST00000269571 HDAC1Q13547 482 aaPredicted RBP14.27□□□□□ -0.12
ERBB2-201ENST00000269571 TSC1Q92574 1164 aa14.27□□□□□ -0.12
ERBB2-201ENST00000269571 NFXL1Q6ZNB6 911 aa14.27□□□□□ -0.12
ERBB2-201ENST00000269571 CCT4P50991 539 aaKnown RBP14.27□□□□□ -0.13
ERBB2-201ENST00000269571 UTP14CQ5TAP6 766 aaKnown RBP14.27□□□□□ -0.13
ERBB2-201ENST00000269571 BLOC1S2Q6QNY1 142 aa14.27□□□□□ -0.13
ERBB2-201ENST00000269571 TMX4Q9H1E5 349 aaPredicted RBP14.27□□□□□ -0.13
ERBB2-201ENST00000269571 PRPF40BQ6NWY9 871 aaKnown RBP14.27□□□□□ -0.13
ERBB2-201ENST00000269571 SMC5Q8IY18 1101 aa14.27□□□□□ -0.13
ERBB2-201ENST00000269571 CHMP4CQ96CF2 233 aa14.27□□□□□ -0.13
ERBB2-201ENST00000269571 PPFIA3O75145 1194 aa14.26□□□□□ -0.13
ERBB2-201ENST00000269571 IPO7O95373 1038 aaKnown RBP14.26□□□□□ -0.13
ERBB2-201ENST00000269571 TESK2Q96S53 571 aa14.26□□□□□ -0.13
ERBB2-201ENST00000269571 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.26□□□□□ -0.138e-7■□□□□ 9.9
ERBB2-201ENST00000269571 V9GYY5 206 aaPredicted RBP14.26□□□□□ -0.13
ERBB2-201ENST00000269571 SDSP20132 328 aa14.26□□□□□ -0.13
ERBB2-201ENST00000269571 RALYLQ86SE5 291 aaKnown RBP14.26□□□□□ -0.13
ERBB2-201ENST00000269571 KRT222Q8N1A0 295 aa14.26□□□□□ -0.13
ERBB2-201ENST00000269571 C17orf53Q8N3J3 647 aaPredicted RBP14.26□□□□□ -0.13
ERBB2-201ENST00000269571 KDM5BQ9UGL1 1544 aa14.26□□□□□ -0.13
ERBB2-201ENST00000269571 OLFM4Q6UX06 510 aa14.26□□□□□ -0.13
ERBB2-201ENST00000269571 UBXN4Q92575 508 aa14.26□□□□□ -0.13
ERBB2-201ENST00000269571 SPG7Q9UQ90 795 aa14.26□□□□□ -0.13
ERBB2-201ENST00000269571 SNX21Q969T3 373 aa14.25□□□□□ -0.13
ERBB2-201ENST00000269571 ZBTB9Q96C00 473 aa14.25□□□□□ -0.13
ERBB2-201ENST00000269571 RAD21O60216 631 aa14.25□□□□□ -0.13
ERBB2-201ENST00000269571 DTNBO60941 627 aa14.25□□□□□ -0.13
ERBB2-201ENST00000269571 POGZQ7Z3K3 1410 aa14.25□□□□□ -0.13
ERBB2-201ENST00000269571 FAM83GA6ND36 823 aa14.25□□□□□ -0.13
ERBB2-201ENST00000269571 USP8P40818 1118 aa14.25□□□□□ -0.13
ERBB2-201ENST00000269571 ALDH1L2Q3SY69 923 aa14.25□□□□□ -0.13
ERBB2-201ENST00000269571 NME9Q86XW9 330 aa14.24□□□□□ -0.13
ERBB2-201ENST00000269571 C14orf93Q9H972 538 aaKnown RBP14.24□□□□□ -0.13
ERBB2-201ENST00000269571 CLIP2Q9UDT6 1046 aa14.24□□□□□ -0.13
ERBB2-201ENST00000269571 HSP90AB3PQ58FF7 597 aa14.24□□□□□ -0.13
ERBB2-201ENST00000269571 GAS2L3Q86XJ1 694 aa14.24□□□□□ -0.13
ERBB2-201ENST00000269571 TTC22Q5TAA0 569 aa14.24□□□□□ -0.13
ERBB2-201ENST00000269571 VPS37DQ86XT2 251 aa14.24□□□□□ -0.13
ERBB2-201ENST00000269571 NOL10Q9BSC4 688 aaKnown RBP14.23□□□□□ -0.13
ERBB2-201ENST00000269571 SRCIN1Q9C0H9 1055 aa14.23□□□□□ -0.13
ERBB2-201ENST00000269571 CNPY2Q9Y2B0 182 aa14.23□□□□□ -0.13
ERBB2-201ENST00000269571 EMILIN1Q9Y6C2 1016 aa14.23□□□□□ -0.13
ERBB2-201ENST00000269571 USP48Q86UV5 1035 aa14.23□□□□□ -0.13
ERBB2-201ENST00000269571 ZFP91Q96JP5 570 aaPredicted RBP14.23□□□□□ -0.13
ERBB2-201ENST00000269571 ACBD3Q9H3P7 528 aa14.23□□□□□ -0.13
ERBB2-201ENST00000269571 WDR7Q9Y4E6 1490 aa14.23□□□□□ -0.13
ERBB2-201ENST00000269571 ABCA5Q8WWZ7 1642 aa14.23□□□□□ -0.13
ERBB2-201ENST00000269571 CCDC70Q6NSX1 233 aa14.23□□□□□ -0.13
ERBB2-201ENST00000269571 FEZ1Q99689 392 aa14.23□□□□□ -0.13
ERBB2-201ENST00000269571 TMX1Q9H3N1 280 aa14.23□□□□□ -0.13
ERBB2-201ENST00000269571 NOL7Q9UMY1 257 aaKnown RBP14.23□□□□□ -0.13
ERBB2-201ENST00000269571 AACSQ86V21 672 aa14.23□□□□□ -0.13
ERBB2-201ENST00000269571 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.23□□□□□ -0.13
ERBB2-201ENST00000269571 TCOF1Q13428 1488 aaKnown RBP14.22□□□□□ -0.13
ERBB2-201ENST00000269571 CEP57L1Q8IYX8 460 aa14.22□□□□□ -0.13
ERBB2-201ENST00000269571 GUCY1B3Q02153 619 aa14.22□□□□□ -0.13
ERBB2-201ENST00000269571 AMOTL2Q9Y2J4 779 aa14.22□□□□□ -0.13
ERBB2-201ENST00000269571 RBM25P49756 843 aaKnown RBP14.22□□□□□ -0.13
ERBB2-201ENST00000269571 STX6O43752 255 aa14.22□□□□□ -0.13
ERBB2-201ENST00000269571 URI1O94763 535 aaPredicted RBP14.22□□□□□ -0.13
ERBB2-201ENST00000269571 CCDC186Q7Z3E2 898 aa14.22□□□□□ -0.13
ERBB2-201ENST00000269571 KIF18AQ8NI77 898 aa14.21□□□□□ -0.13
ERBB2-201ENST00000269571 DHX16O60231 1041 aaKnown RBP14.21□□□□□ -0.13
ERBB2-201ENST00000269571 AXDND1Q5T1B0 1012 aaPredicted RBP14.21□□□□□ -0.13
ERBB2-201ENST00000269571 OGFRQ9NZT2 677 aa14.21□□□□□ -0.13
ERBB2-201ENST00000269571 HOOK1Q9UJC3 728 aaKnown RBP14.21□□□□□ -0.13
ERBB2-201ENST00000269571 ANKRD20A12PQ8NF67 263 aa14.21□□□□□ -0.14
ERBB2-201ENST00000269571 TCEANC2Q96MN5 208 aa14.21□□□□□ -0.14
ERBB2-201ENST00000269571 FYB1O15117 783 aa14.2□□□□□ -0.14
ERBB2-201ENST00000269571 TMCO3Q6UWJ1 677 aa14.2□□□□□ -0.14
ERBB2-201ENST00000269571 CHAMP1Q96JM3 812 aa14.2□□□□□ -0.14
ERBB2-201ENST00000269571 ZNF396Q96N95 335 aaPredicted RBP14.2□□□□□ -0.14
ERBB2-201ENST00000269571 PPP6R1Q9UPN7 881 aa14.2□□□□□ -0.14
ERBB2-201ENST00000269571 LIMCH1Q9UPQ0 1083 aa14.2□□□□□ -0.14
ERBB2-201ENST00000269571 RAB11FIP3O75154 756 aa14.2□□□□□ -0.14
ERBB2-201ENST00000269571 ZNF165P49910 485 aa14.2□□□□□ -0.14
ERBB2-201ENST00000269571 DHX37Q8IY37 1157 aaKnown RBP14.2□□□□□ -0.14
ERBB2-201ENST00000269571 SCAF11Q99590 1463 aaKnown RBP14.2□□□□□ -0.14
ERBB2-201ENST00000269571 CFAP43Q8NDM7 1665 aa14.2□□□□□ -0.14
ERBB2-201ENST00000269571 NAP1L1P55209 391 aaKnown RBP14.2□□□□□ -0.14
ERBB2-201ENST00000269571 ZC3H6P61129 1189 aaKnown RBP14.2□□□□□ -0.14
ERBB2-201ENST00000269571 RUFY1Q96T51 708 aa14.2□□□□□ -0.14
ERBB2-201ENST00000269571 MEIS3Q99687 375 aa14.2□□□□□ -0.14
ERBB2-201ENST00000269571 STRN4Q9NRL3 753 aa14.2□□□□□ -0.14
ERBB2-201ENST00000269571 FAM135AQ9P2D6 1515 aa14.2□□□□□ -0.14
ERBB2-201ENST00000269571 ZNF530Q6P9A1 599 aaPredicted RBP14.2□□□□□ -0.14
ERBB2-201ENST00000269571 NECAB1Q8N987 351 aa14.2□□□□□ -0.14
ERBB2-201ENST00000269571 A2MP01023 1474 aa14.19□□□□□ -0.14
ERBB2-201ENST00000269571 CAGE1Q8TC20 777 aa14.19□□□□□ -0.14
ERBB2-201ENST00000269571 ZSCAN31Q96LW9 406 aaPredicted RBP14.19□□□□□ -0.14
ERBB2-201ENST00000269571 MTMR7Q9Y216 660 aa14.19□□□□□ -0.14
ERBB2-201ENST00000269571 CLGNO14967 610 aa14.19□□□□□ -0.14
ERBB2-201ENST00000269571 SFPQP23246 707 aaKnown RBP eCLIP14.19□□□□□ -0.14
ERBB2-201ENST00000269571 GJB2P29033 226 aa14.19□□□□□ -0.14
ERBB2-201ENST00000269571 CTR9Q6PD62 1173 aa14.19□□□□□ -0.14
ERBB2-201ENST00000269571 MBIPQ9NS73 344 aa14.19□□□□□ -0.14
ERBB2-201ENST00000269571 SAFBQ15424 915 aaKnown RBP eCLIP14.19□□□□□ -0.14
ERBB2-201ENST00000269571 CFAP100Q494V2 611 aa14.19□□□□□ -0.14
ERBB2-201ENST00000269571 GIMAP7Q8NHV1 300 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms