RNA–Protein interactions for RNA: ENST00000265806.10

R3HCC1-201, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-201ENST00000265806 DCAF5Q96JK2 942 aa31.24■■■□□ 2.59
R3HCC1-201ENST00000265806 PCDH11XQ9BZA7 1347 aa31.24■■■□□ 2.59
R3HCC1-201ENST00000265806 PCDH11YQ9BZA8 1340 aa31.24■■■□□ 2.59
R3HCC1-201ENST00000265806 PLCH1Q4KWH8 1693 aa31.23■■■□□ 2.59
R3HCC1-201ENST00000265806 MVPQ14764 893 aaKnown RBP31.22■■■□□ 2.59
R3HCC1-201ENST00000265806 TCERG1O14776 1098 aaKnown RBP31.22■■■□□ 2.59
R3HCC1-201ENST00000265806 JCADQ9P266 1359 aa31.21■■■□□ 2.59
R3HCC1-201ENST00000265806 ADAMTS2O95450 1211 aa31.21■■■□□ 2.59
R3HCC1-201ENST00000265806 EIF4A1P60842 406 aaKnown RBP31.21■■■□□ 2.59
R3HCC1-201ENST00000265806 MRC1P22897 1456 aa31.21■■■□□ 2.59
R3HCC1-201ENST00000265806 SLC52A2Q9HAB3 445 aa31.2■■■□□ 2.58
R3HCC1-201ENST00000265806 HOXB7P09629 217 aa31.19■■■□□ 2.58
R3HCC1-201ENST00000265806 NRAPQ86VF7 1730 aa31.17■■■□□ 2.58
R3HCC1-201ENST00000265806 NUTM2BA6NNL0 878 aaPredicted RBP31.17■■■□□ 2.58
R3HCC1-201ENST00000265806 NUTM2EB1AL46 878 aaPredicted RBP31.17■■■□□ 2.58
R3HCC1-201ENST00000265806 NUTM2AQ8IVF1 878 aaPredicted RBP31.17■■■□□ 2.58
R3HCC1-201ENST00000265806 API5Q9BZZ5 524 aaKnown RBP31.17■■■□□ 2.58
R3HCC1-201ENST00000265806 SHANK3Q9BYB0 1731 aa31.17■■■□□ 2.58
R3HCC1-201ENST00000265806 DISP2A7MBM2 1401 aa31.16■■■□□ 2.58
R3HCC1-201ENST00000265806 CCDC30Q5VVM6 783 aa31.16■■■□□ 2.58
R3HCC1-201ENST00000265806 KCNQ3O43525 872 aa31.15■■■□□ 2.58
R3HCC1-201ENST00000265806 NKX1-1Q15270 411 aaPredicted RBP31.15■■■□□ 2.58
R3HCC1-201ENST00000265806 USP35Q9P2H5 1018 aa31.15■■■□□ 2.58
R3HCC1-201ENST00000265806 NWD2Q9ULI1 1742 aa31.15■■■□□ 2.58
R3HCC1-201ENST00000265806 TMEM57Q8N5G2 664 aa31.15■■■□□ 2.58
R3HCC1-201ENST00000265806 DDX19BQ9UMR2 479 aa31.15■■■□□ 2.58
R3HCC1-201ENST00000265806 ABCC4O15439 1325 aa31.14■■■□□ 2.58
R3HCC1-201ENST00000265806 PTPRCP08575 1304 aa31.14■■■□□ 2.58
R3HCC1-201ENST00000265806 CHMP4AQ9BY43 222 aa31.14■■■□□ 2.58
R3HCC1-201ENST00000265806 HEG1Q9ULI3 1381 aa31.14■■■□□ 2.58
R3HCC1-201ENST00000265806 SLIT2O94813 1529 aa31.13■■■□□ 2.57
R3HCC1-201ENST00000265806 SLC4A2P04920 1241 aa31.13■■■□□ 2.57
R3HCC1-201ENST00000265806 CACNA1FO60840 1977 aa31.13■■■□□ 2.57
R3HCC1-201ENST00000265806 STK31Q9BXU1 1019 aa31.12■■■□□ 2.57
R3HCC1-201ENST00000265806 ITPRIPQ8IWB1 547 aa31.12■■■□□ 2.57
R3HCC1-201ENST00000265806 NFATC2IPQ8NCF5 419 aa31.12■■■□□ 2.57
R3HCC1-201ENST00000265806 HDGFL1Q5TGJ6 251 aa31.09■■■□□ 2.57
R3HCC1-201ENST00000265806 ZNF790Q6PG37 636 aa31.09■■■□□ 2.57
R3HCC1-201ENST00000265806 RGS12O14924 1447 aa31.09■■■□□ 2.57
R3HCC1-201ENST00000265806 SPATA31A6Q5VVP1 1343 aa31.08■■■□□ 2.57
R3HCC1-201ENST00000265806 KDM2BQ8NHM5 1336 aa31.08■■■□□ 2.57
R3HCC1-201ENST00000265806 ERVV-2B6SEH9 535 aa31.08■■■□□ 2.57
R3HCC1-201ENST00000265806 THRAP3Q9Y2W1 955 aaKnown RBP31.08■■■□□ 2.57
R3HCC1-201ENST00000265806 WNK3Q9BYP7 1800 aa31.07■■■□□ 2.56
R3HCC1-201ENST00000265806 SPATA31A1Q5TZJ5 1347 aa31.07■■■□□ 2.56
R3HCC1-201ENST00000265806 CABP4P57796 275 aa31.07■■■□□ 2.56
R3HCC1-201ENST00000265806 GIGYF1O75420 1035 aaPredicted RBP31.06■■■□□ 2.56
R3HCC1-201ENST00000265806 CENPQQ7L2Z9 268 aaPredicted RBP31.06■■■□□ 2.56
R3HCC1-201ENST00000265806 DDX54Q8TDD1 881 aaKnown RBP31.06■■■□□ 2.56
R3HCC1-201ENST00000265806 CDCA7Q9BWT1 371 aaPredicted RBP31.05■■■□□ 2.56
R3HCC1-201ENST00000265806 CHMP4BQ9H444 224 aaKnown RBP31.04■■■□□ 2.56
R3HCC1-201ENST00000265806 G2E3Q7L622 706 aa31.03■■■□□ 2.56
R3HCC1-201ENST00000265806 SLC39A6Q13433 755 aa31.02■■■□□ 2.56
R3HCC1-201ENST00000265806 ZBTB40Q9NUA8 1239 aa31.02■■■□□ 2.56
R3HCC1-201ENST00000265806 SPATA31A5Q5VU36 1347 aa31.02■■■□□ 2.56
R3HCC1-201ENST00000265806 SPATA31A7Q8IWB4 1347 aa31.02■■■□□ 2.56
R3HCC1-201ENST00000265806 INTS3Q68E01 1043 aaKnown RBP31.02■■■□□ 2.56
R3HCC1-201ENST00000265806 NECTIN2Q92692 538 aa31.02■■■□□ 2.56
R3HCC1-201ENST00000265806 FLIIQ13045 1269 aa31.01■■■□□ 2.55
R3HCC1-201ENST00000265806 PCDHB15Q9Y5E8 787 aa31.01■■■□□ 2.55
R3HCC1-201ENST00000265806 EIF2S2P20042 333 aaKnown RBP31■■■□□ 2.55
R3HCC1-201ENST00000265806 UNC5CLQ8IV45 518 aa31■■■□□ 2.55
R3HCC1-201ENST00000265806 TNS2Q63HR2 1409 aa30.99■■■□□ 2.55
R3HCC1-201ENST00000265806 EXOC5O00471 708 aa30.99■■■□□ 2.55
R3HCC1-201ENST00000265806 ZBTB7BO15156 539 aaPredicted RBP30.99■■■□□ 2.55
R3HCC1-201ENST00000265806 TTC5Q8N0Z6 440 aa30.99■■■□□ 2.55
R3HCC1-201ENST00000265806 HSPA1LP34931 641 aa30.97■■■□□ 2.55
R3HCC1-201ENST00000265806 BARGINQ6ZT62 677 aa30.97■■■□□ 2.55
R3HCC1-201ENST00000265806 FNBP4Q8N3X1 1017 aaPredicted RBP30.97■■■□□ 2.55
R3HCC1-201ENST00000265806 NGLY1Q96IV0 654 aa30.97■■■□□ 2.55
R3HCC1-201ENST00000265806 LRP6O75581 1613 aa30.96■■■□□ 2.55
R3HCC1-201ENST00000265806 TOGARAM1Q9Y4F4 1720 aa30.96■■■□□ 2.55
R3HCC1-201ENST00000265806 ZNF496Q96IT1 587 aaPredicted RBP30.96■■■□□ 2.55
R3HCC1-201ENST00000265806 C8orf37Q96NL8 207 aa30.96■■■□□ 2.55
R3HCC1-201ENST00000265806 BCL9LQ86UU0 1499 aa30.96■■■□□ 2.55
R3HCC1-201ENST00000265806 IGHDP01880 384 aa30.95■■■□□ 2.55
R3HCC1-201ENST00000265806 CHPF2Q9P2E5 772 aa30.95■■■□□ 2.55
R3HCC1-201ENST00000265806 DBF4Q9UBU7 674 aaPredicted RBP30.95■■■□□ 2.55
R3HCC1-201ENST00000265806 FMNL2Q96PY5 1086 aa30.94■■■□□ 2.54
R3HCC1-201ENST00000265806 FKBP5Q13451 457 aaPredicted RBP30.94■■■□□ 2.54
R3HCC1-201ENST00000265806 PAPPAQ13219 1627 aa30.94■■■□□ 2.54
R3HCC1-201ENST00000265806 PRAMEF22A3QJZ6 481 aa30.92■■■□□ 2.54
R3HCC1-201ENST00000265806 SNRPA1P09661 255 aaKnown RBP30.92■■■□□ 2.54
R3HCC1-201ENST00000265806 VPS72Q15906 364 aa30.92■■■□□ 2.54
R3HCC1-201ENST00000265806 C5P01031 1676 aa30.92■■■□□ 2.54
R3HCC1-201ENST00000265806 UBR2Q8IWV8 1755 aa30.91■■■□□ 2.54
R3HCC1-201ENST00000265806 CCT4P50991 539 aaKnown RBP30.91■■■□□ 2.54
R3HCC1-201ENST00000265806 RWDD1Q9H446 243 aaPredicted RBP30.91■■■□□ 2.54
R3HCC1-201ENST00000265806 GLI3P10071 1580 aa30.91■■■□□ 2.54
R3HCC1-201ENST00000265806 PHAXQ9H814 394 aaKnown RBP30.9■■■□□ 2.54
R3HCC1-201ENST00000265806 CCDC9Q9Y3X0 531 aaKnown RBP30.9■■■□□ 2.54
R3HCC1-201ENST00000265806 PXDNLA1KZ92 1463 aa30.9■■■□□ 2.54
R3HCC1-201ENST00000265806 F6X3S4 739 aa30.89■■■□□ 2.54
R3HCC1-201ENST00000265806 DDB1Q16531 1140 aa30.89■■■□□ 2.54
R3HCC1-201ENST00000265806 TMOD3Q9NYL9 352 aa30.89■■■□□ 2.54
R3HCC1-201ENST00000265806 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.88■■■□□ 2.53
R3HCC1-201ENST00000265806 HDAC1Q13547 482 aaPredicted RBP30.88■■■□□ 2.53
R3HCC1-201ENST00000265806 DDX21Q9NR30 783 aaKnown RBP eCLIP30.87■■■□□ 2.53
R3HCC1-201ENST00000265806 HYPKQ9NX55 129 aa30.87■■■□□ 2.53
R3HCC1-201ENST00000265806 KCPQ6ZWJ8 1503 aa30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms