RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 KCPQ6ZWJ8 1503 aa18.32■□□□□ 0.52
SGCA-201ENST00000262018 A0A1W2PP64 1363 aa18.32■□□□□ 0.52
SGCA-201ENST00000262018 KIAA1551Q9HCM1 1747 aa18.31■□□□□ 0.52
SGCA-201ENST00000262018 SLC34A2O95436 690 aa18.31■□□□□ 0.52
SGCA-201ENST00000262018 SMC1BQ8NDV3 1235 aa18.31■□□□□ 0.52
SGCA-201ENST00000262018 LOC102724428A0A0B4J2F2 783 aa18.3■□□□□ 0.52
SGCA-201ENST00000262018 SIK1P57059 783 aa18.3■□□□□ 0.52
SGCA-201ENST00000262018 PIGBQ92521 554 aa18.3■□□□□ 0.52
SGCA-201ENST00000262018 KIF13BQ9NQT8 1826 aa18.29■□□□□ 0.52
SGCA-201ENST00000262018 CYP27B1O15528 508 aa18.29■□□□□ 0.52
SGCA-201ENST00000262018 RNF181Q9P0P0 153 aa18.29■□□□□ 0.52
SGCA-201ENST00000262018 C10orf71Q711Q0 1435 aa18.28■□□□□ 0.52
SGCA-201ENST00000262018 CCDC87Q9NVE4 849 aa18.27■□□□□ 0.52
SGCA-201ENST00000262018 TMF1P82094 1093 aa18.26■□□□□ 0.51
SGCA-201ENST00000262018 ITPK1Q13572 414 aa18.26■□□□□ 0.51
SGCA-201ENST00000262018 RRS1Q15050 365 aaKnown RBP18.26■□□□□ 0.51
SGCA-201ENST00000262018 NLGN1Q8N2Q7 840 aa18.26■□□□□ 0.51
SGCA-201ENST00000262018 SMG6Q86US8 1419 aaKnown RBP18.26■□□□□ 0.51
SGCA-201ENST00000262018 RTL1A6NKG5 1358 aa18.25■□□□□ 0.51
SGCA-201ENST00000262018 ITGB4P16144 1822 aa18.25■□□□□ 0.51
SGCA-201ENST00000262018 ATP6V1AP38606 617 aa18.25■□□□□ 0.51
SGCA-201ENST00000262018 MIER1Q8N108 512 aa18.25■□□□□ 0.51
SGCA-201ENST00000262018 PKD1L3Q7Z443 1732 aa18.25■□□□□ 0.51
SGCA-201ENST00000262018 PCNTO95613 3336 aa18.24■□□□□ 0.51
SGCA-201ENST00000262018 KCNA3P22001 575 aa18.23■□□□□ 0.51
SGCA-201ENST00000262018 DDX10Q13206 875 aaKnown RBP18.23■□□□□ 0.51
SGCA-201ENST00000262018 TRAPPC3LQ5T215 181 aa18.23■□□□□ 0.51
SGCA-201ENST00000262018 PIM2Q9P1W9 311 aa18.23■□□□□ 0.51
SGCA-201ENST00000262018 MAP2P11137 1827 aaKnown RBP18.23■□□□□ 0.51
SGCA-201ENST00000262018 PARP3Q9Y6F1 533 aa18.23■□□□□ 0.51
SGCA-201ENST00000262018 TNRC6CQ9HCJ0 1690 aaKnown RBP18.22■□□□□ 0.51
SGCA-201ENST00000262018 WASHC2AQ641Q2 1341 aa18.22■□□□□ 0.51
SGCA-201ENST00000262018 DALRD3Q5D0E6 543 aaKnown RBP18.22■□□□□ 0.51
SGCA-201ENST00000262018 DCAF5Q96JK2 942 aa18.22■□□□□ 0.51
SGCA-201ENST00000262018 ASAP1Q9ULH1 1129 aa18.22■□□□□ 0.51
SGCA-201ENST00000262018 RTCBQ9Y3I0 505 aaKnown RBP18.22■□□□□ 0.51
SGCA-201ENST00000262018 TMOD3Q9NYL9 352 aa18.21■□□□□ 0.51
SGCA-201ENST00000262018 BRCA1P38398 1863 aaKnown RBP18.2■□□□□ 0.5
SGCA-201ENST00000262018 HSP90AB2PQ58FF8 381 aa18.2■□□□□ 0.5
SGCA-201ENST00000262018 ARFGEF1Q9Y6D6 1849 aa18.2■□□□□ 0.5
SGCA-201ENST00000262018 C4AP0C0L4 1744 aa18.19■□□□□ 0.5
SGCA-201ENST00000262018 GYS1P13807 737 aa18.19■□□□□ 0.5
SGCA-201ENST00000262018 ARHGEF1Q92888 912 aaKnown RBP18.19■□□□□ 0.5
SGCA-201ENST00000262018 ST20-MTHFSA0A0A6YYL1 179 aa18.18■□□□□ 0.5
SGCA-201ENST00000262018 NKX1-1Q15270 411 aaPredicted RBP18.18■□□□□ 0.5
SGCA-201ENST00000262018 VEGFAP15692 232 aaPredicted RBP18.17■□□□□ 0.5
SGCA-201ENST00000262018 RFC4P35249 363 aa18.17■□□□□ 0.5
SGCA-201ENST00000262018 INSRP06213 1382 aa18.17■□□□□ 0.5
SGCA-201ENST00000262018 SLC24A1O60721 1099 aa18.16■□□□□ 0.5
SGCA-201ENST00000262018 PUS7Q96PZ0 661 aaKnown RBP18.16■□□□□ 0.5
SGCA-201ENST00000262018 SPG7Q9UQ90 795 aa18.16■□□□□ 0.5
SGCA-201ENST00000262018 GGNBP2Q9H3C7 697 aa18.15■□□□□ 0.5
SGCA-201ENST00000262018 ATG3Q9NT62 314 aa18.15■□□□□ 0.5
SGCA-201ENST00000262018 ADRA2BP18089 450 aa18.15■□□□□ 0.5
SGCA-201ENST00000262018 CHRNA5P30532 468 aa18.15■□□□□ 0.5
SGCA-201ENST00000262018 KIF7Q2M1P5 1343 aa18.14■□□□□ 0.49
SGCA-201ENST00000262018 RASSF7Q02833 373 aa18.14■□□□□ 0.49
SGCA-201ENST00000262018 TESK2Q96S53 571 aa18.14■□□□□ 0.49
SGCA-201ENST00000262018 SBF1O95248 1867 aa18.13■□□□□ 0.49
SGCA-201ENST00000262018 FLT4P35916 1363 aa18.13■□□□□ 0.49
SGCA-201ENST00000262018 GLTPD2A6NH11 291 aa18.13■□□□□ 0.49
SGCA-201ENST00000262018 RBM42Q9BTD8 480 aaKnown RBP18.13■□□□□ 0.49
SGCA-201ENST00000262018 MKRN1Q9UHC7 482 aaKnown RBP18.13■□□□□ 0.49
SGCA-201ENST00000262018 ZC3H4Q9UPT8 1303 aaKnown RBP18.12■□□□□ 0.49
SGCA-201ENST00000262018 FYB1O15117 783 aa18.12■□□□□ 0.49
SGCA-201ENST00000262018 FOXN1O15353 648 aa18.12■□□□□ 0.49
SGCA-201ENST00000262018 RPS6KA4O75676 772 aa18.12■□□□□ 0.49
SGCA-201ENST00000262018 RC3H1Q5TC82 1133 aaKnown RBP18.12■□□□□ 0.49
SGCA-201ENST00000262018 SLC4A9Q96Q91 983 aa18.11■□□□□ 0.49
SGCA-201ENST00000262018 KDRP35968 1356 aa18.1■□□□□ 0.49
SGCA-201ENST00000262018 LMNB1P20700 586 aa18.09■□□□□ 0.49
SGCA-201ENST00000262018 DDR1Q08345 913 aa18.09■□□□□ 0.49
SGCA-201ENST00000262018 PRDM10Q9NQV6 1147 aa18.09■□□□□ 0.49
SGCA-201ENST00000262018 CNTNAP4Q9C0A0 1308 aa18.09■□□□□ 0.49
SGCA-201ENST00000262018 PHKG2P15735 406 aa18.08■□□□□ 0.49
SGCA-201ENST00000262018 FAM161AQ3B820 660 aa18.08■□□□□ 0.49
SGCA-201ENST00000262018 IFNL2Q8IZJ0 200 aa18.08■□□□□ 0.49
SGCA-201ENST00000262018 SRP68Q9UHB9 627 aaKnown RBP18.08■□□□□ 0.49
SGCA-201ENST00000262018 FKBP8Q14318 412 aa18.07■□□□□ 0.48
SGCA-201ENST00000262018 CREBZFQ9NS37 354 aa18.07■□□□□ 0.48
SGCA-201ENST00000262018 PCDH10Q9P2E7 1040 aa18.07■□□□□ 0.48
SGCA-201ENST00000262018 KDM6AO15550 1401 aaPredicted RBP18.07■□□□□ 0.48
SGCA-201ENST00000262018 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.06■□□□□ 0.48
SGCA-201ENST00000262018 KIF24Q5T7B8 1368 aa18.06■□□□□ 0.48
SGCA-201ENST00000262018 AIDAQ96BJ3 306 aa18.06■□□□□ 0.48
SGCA-201ENST00000262018 EMILIN1Q9Y6C2 1016 aa18.06■□□□□ 0.48
SGCA-201ENST00000262018 POTECB2RU33 542 aa18.05■□□□□ 0.48
SGCA-201ENST00000262018 CTCFP49711 727 aaPredicted RBP18.05■□□□□ 0.48
SGCA-201ENST00000262018 CDCA8Q53HL2 280 aa18.05■□□□□ 0.48
SGCA-201ENST00000262018 NCAPD2Q15021 1401 aa18.04■□□□□ 0.48
SGCA-201ENST00000262018 PPM1GO15355 546 aaPredicted RBP18.04■□□□□ 0.48
SGCA-201ENST00000262018 ANP32CO43423 234 aa18.04■□□□□ 0.48
SGCA-201ENST00000262018 USP42Q9H9J4 1324 aaKnown RBP18.03■□□□□ 0.48
SGCA-201ENST00000262018 COL5A3P25940 1745 aaPredicted RBP18.02■□□□□ 0.48
SGCA-201ENST00000262018 POLRMTO00411 1230 aaKnown RBP18.02■□□□□ 0.48
SGCA-201ENST00000262018 CHADLQ6NUI6 762 aa18.02■□□□□ 0.48
SGCA-201ENST00000262018 DPY19L2Q6NUT2 758 aa18.02■□□□□ 0.48
SGCA-201ENST00000262018 EYA1Q99502 592 aa18.02■□□□□ 0.48
SGCA-201ENST00000262018 CNTNAP1P78357 1384 aa18.01■□□□□ 0.47
SGCA-201ENST00000262018 CRKLP46109 303 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms