RNA–Protein interactions for RNA: ENST00000253788.9

RPL27-201, Transcript of ribosomal protein L27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL27, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL27-201ENST00000253788 SULT6B1Q6IMI4 303 aa13.2□□□□□ -0.3
RPL27-201ENST00000253788 ASAP1Q9ULH1 1129 aa13.2□□□□□ -0.3
RPL27-201ENST00000253788 SSFA2P28290 1259 aa13.19□□□□□ -0.3
RPL27-201ENST00000253788 IL13P35225 146 aa13.19□□□□□ -0.3
RPL27-201ENST00000253788 ATG3Q9NT62 314 aa13.19□□□□□ -0.3
RPL27-201ENST00000253788 CC2D1BQ5T0F9 858 aaKnown RBP13.18□□□□□ -0.3
RPL27-201ENST00000253788 ITGB4P16144 1822 aa13.18□□□□□ -0.3
RPL27-201ENST00000253788 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.17□□□□□ -0.3
RPL27-201ENST00000253788 DIAPH1O60610 1272 aaKnown RBP13.17□□□□□ -0.3
RPL27-201ENST00000253788 AEBP1Q8IUX7 1158 aa13.17□□□□□ -0.3
RPL27-201ENST00000253788 CD2APQ9Y5K6 639 aa13.17□□□□□ -0.3
RPL27-201ENST00000253788 GRIN3BO60391 1043 aa13.16□□□□□ -0.3
RPL27-201ENST00000253788 RC3H1Q5TC82 1133 aaKnown RBP13.16□□□□□ -0.3
RPL27-201ENST00000253788 RBM42Q9BTD8 480 aaKnown RBP13.16□□□□□ -0.3
RPL27-201ENST00000253788 KDRP35968 1356 aa13.16□□□□□ -0.3
RPL27-201ENST00000253788 NPC1L1Q9UHC9 1359 aa13.16□□□□□ -0.3
RPL27-201ENST00000253788 GNPATO15228 680 aa13.15□□□□□ -0.3
RPL27-201ENST00000253788 PHF14O94880 888 aa13.15□□□□□ -0.3
RPL27-201ENST00000253788 TRAPPC3LQ5T215 181 aa13.15□□□□□ -0.3
RPL27-201ENST00000253788 MSL1Q68DK7 614 aa13.15□□□□□ -0.3
RPL27-201ENST00000253788 NFATC2IPQ8NCF5 419 aa13.15□□□□□ -0.3
RPL27-201ENST00000253788 LINC00116Q8NCU8 138 aa13.15□□□□□ -0.3
RPL27-201ENST00000253788 RTCBQ9Y3I0 505 aaKnown RBP13.15□□□□□ -0.3
RPL27-201ENST00000253788 C5P01031 1676 aa13.15□□□□□ -0.31
RPL27-201ENST00000253788 ITPK1Q13572 414 aa13.14□□□□□ -0.31
RPL27-201ENST00000253788 AKAP4Q5JQC9 854 aa13.14□□□□□ -0.31
RPL27-201ENST00000253788 PELP1Q8IZL8 1130 aaKnown RBP13.14□□□□□ -0.31
RPL27-201ENST00000253788 TOGARAM1Q9Y4F4 1720 aa13.13□□□□□ -0.31
RPL27-201ENST00000253788 NLGN1Q8N2Q7 840 aa13.13□□□□□ -0.31
RPL27-201ENST00000253788 TAF1LQ8IZX4 1826 aa13.13□□□□□ -0.31
RPL27-201ENST00000253788 C4BP0C0L5 1744 aa13.13□□□□□ -0.31
RPL27-201ENST00000253788 COL24A1Q17RW2 1714 aa13.13□□□□□ -0.31
RPL27-201ENST00000253788 HMOX1P09601 288 aa13.12□□□□□ -0.31
RPL27-201ENST00000253788 CFAP53Q96M91 514 aa13.12□□□□□ -0.31
RPL27-201ENST00000253788 TUBGCP6Q96RT7 1819 aa13.11□□□□□ -0.31
RPL27-201ENST00000253788 PTCD1O75127 700 aaKnown RBP13.11□□□□□ -0.31
RPL27-201ENST00000253788 RPS6KA4O75676 772 aa13.11□□□□□ -0.31
RPL27-201ENST00000253788 RFC4P35249 363 aa13.11□□□□□ -0.31
RPL27-201ENST00000253788 NLGN2Q8NFZ4 835 aa13.11□□□□□ -0.31
RPL27-201ENST00000253788 U2SURPO15042 1029 aaKnown RBP13.1□□□□□ -0.31
RPL27-201ENST00000253788 CNGB1Q14028 1251 aaPredicted RBP13.1□□□□□ -0.31
RPL27-201ENST00000253788 SLC52A2Q9HAB3 445 aa13.1□□□□□ -0.31
RPL27-201ENST00000253788 NUDCQ9Y266 331 aa13.1□□□□□ -0.31
RPL27-201ENST00000253788 KDM6AO15550 1401 aaPredicted RBP13.1□□□□□ -0.31
RPL27-201ENST00000253788 CNTNAP4Q9C0A0 1308 aa13.1□□□□□ -0.31
RPL27-201ENST00000253788 RNMTO43148 476 aaKnown RBP13.09□□□□□ -0.31
RPL27-201ENST00000253788 AMIGO3Q86WK7 504 aa13.09□□□□□ -0.31
RPL27-201ENST00000253788 ARHGEF1Q92888 912 aaKnown RBP13.09□□□□□ -0.31
RPL27-201ENST00000253788 SLC4A9Q96Q91 983 aa13.09□□□□□ -0.31
RPL27-201ENST00000253788 CHD4Q14839 1912 aa13.08□□□□□ -0.32
RPL27-201ENST00000253788 MTHFSDQ2M296 383 aaKnown RBP13.08□□□□□ -0.32
RPL27-201ENST00000253788 SMIM5Q71RC9 77 aa13.08□□□□□ -0.32
RPL27-201ENST00000253788 ZNF784Q8NCA9 323 aaPredicted RBP13.08□□□□□ -0.32
RPL27-201ENST00000253788 LGR6Q9HBX8 967 aa13.08□□□□□ -0.32
RPL27-201ENST00000253788 U3KPZ7 1027 aaPredicted RBP13.08□□□□□ -0.32
RPL27-201ENST00000253788 UBR3Q6ZT12 1888 aa13.08□□□□□ -0.32
RPL27-201ENST00000253788 MMP10P09238 476 aa13.07□□□□□ -0.32
RPL27-201ENST00000253788 CRKLP46109 303 aaKnown RBP13.07□□□□□ -0.32
RPL27-201ENST00000253788 GAS2L2Q8NHY3 880 aa13.07□□□□□ -0.32
RPL27-201ENST00000253788 ZNF831Q5JPB2 1677 aa13.06□□□□□ -0.32
RPL27-201ENST00000253788 GNAT3A8MTJ3 354 aa13.06□□□□□ -0.32
RPL27-201ENST00000253788 PARP3Q9Y6F1 533 aa13.06□□□□□ -0.32
RPL27-201ENST00000253788 YBX3P16989 372 aaKnown RBP eCLIP13.05□□□□□ -0.321e-20■□□□□ 10.6
RPL27-201ENST00000253788 TGFB2P61812 414 aa13.05□□□□□ -0.32
RPL27-201ENST00000253788 TEFQ10587 303 aa13.05□□□□□ -0.32
RPL27-201ENST00000253788 VSIG10Q8N0Z9 540 aa13.05□□□□□ -0.32
RPL27-201ENST00000253788 CCDC87Q9NVE4 849 aa13.05□□□□□ -0.32
RPL27-201ENST00000253788 ZPR1O75312 459 aa13.04□□□□□ -0.32
RPL27-201ENST00000253788 TTC5Q8N0Z6 440 aa13.04□□□□□ -0.32
RPL27-201ENST00000253788 FCHSD2O94868 740 aa13.03□□□□□ -0.32
RPL27-201ENST00000253788 STARD3NLO95772 234 aa13.03□□□□□ -0.32
RPL27-201ENST00000253788 GYS1P13807 737 aa13.03□□□□□ -0.32
RPL27-201ENST00000253788 TEX13AQ9BXU3 409 aaPredicted RBP13.03□□□□□ -0.32
RPL27-201ENST00000253788 SCN11AQ9UI33 1791 aa13.02□□□□□ -0.32
RPL27-201ENST00000253788 SLC39A6Q13433 755 aa13.02□□□□□ -0.33
RPL27-201ENST00000253788 INTS5Q6P9B9 1019 aaKnown RBP13.02□□□□□ -0.33
RPL27-201ENST00000253788 DNAJC10Q8IXB1 793 aa13.02□□□□□ -0.33
RPL27-201ENST00000253788 NEFMP07197 916 aa13.01□□□□□ -0.33
RPL27-201ENST00000253788 U2AF1L5P0DN76 240 aaPredicted RBP13.01□□□□□ -0.33
RPL27-201ENST00000253788 CYP19A1P11511 503 aaPredicted RBP13.01□□□□□ -0.33
RPL27-201ENST00000253788 PPP2R1AP30153 589 aa13.01□□□□□ -0.33
RPL27-201ENST00000253788 U2AF1Q01081 240 aaKnown RBP eCLIP13.01□□□□□ -0.332e-8■□□□□ 9.1
RPL27-201ENST00000253788 PRKAR2BP31323 418 aa13□□□□□ -0.33
RPL27-201ENST00000253788 IL17REQ8NFR9 667 aa13□□□□□ -0.33
RPL27-201ENST00000253788 RTF1Q92541 710 aaKnown RBP13□□□□□ -0.33
RPL27-201ENST00000253788 USP42Q9H9J4 1324 aaKnown RBP12.99□□□□□ -0.33
RPL27-201ENST00000253788 A0A087WZG4 1122 aa12.99□□□□□ -0.33
RPL27-201ENST00000253788 CAPN15O75808 1086 aa12.99□□□□□ -0.33
RPL27-201ENST00000253788 ZNF790Q6PG37 636 aa12.99□□□□□ -0.33
RPL27-201ENST00000253788 NPM2Q86SE8 214 aaKnown RBP12.99□□□□□ -0.33
RPL27-201ENST00000253788 RSPH6AQ9H0K4 717 aa12.99□□□□□ -0.33
RPL27-201ENST00000253788 COL3A1P02461 1466 aaPredicted RBP12.98□□□□□ -0.33
RPL27-201ENST00000253788 MYH14Q7Z406 1995 aaKnown RBP12.98□□□□□ -0.33
RPL27-201ENST00000253788 SOS1Q07889 1333 aaPredicted RBP12.98□□□□□ -0.33
RPL27-201ENST00000253788 A0A0G2JLW4 131 aa12.98□□□□□ -0.33
RPL27-201ENST00000253788 HTATSF1O43719 755 aaKnown RBP12.98□□□□□ -0.33
RPL27-201ENST00000253788 FKBP8Q14318 412 aa12.98□□□□□ -0.33
RPL27-201ENST00000253788 PHACTR3Q96KR7 559 aa12.98□□□□□ -0.33
RPL27-201ENST00000253788 FMNL2Q96PY5 1086 aa12.98□□□□□ -0.33
RPL27-201ENST00000253788 PNNQ9H307 717 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms