RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 KDM6AO15550 1401 aaPredicted RBP29.74■■■□□ 2.35
SYNGR3-201ENST00000248121 RNMTO43148 476 aaKnown RBP29.73■■■□□ 2.35
SYNGR3-201ENST00000248121 USP35Q9P2H5 1018 aa29.73■■■□□ 2.35
SYNGR3-201ENST00000248121 DDX19BQ9UMR2 479 aa29.73■■■□□ 2.35
SYNGR3-201ENST00000248121 ARHGAP45Q92619 1136 aa29.73■■■□□ 2.35
SYNGR3-201ENST00000248121 CARD10Q9BWT7 1032 aa29.73■■■□□ 2.35
SYNGR3-201ENST00000248121 PDE4AP27815 886 aa29.72■■■□□ 2.35
SYNGR3-201ENST00000248121 CYP27B1O15528 508 aa29.72■■■□□ 2.35
SYNGR3-201ENST00000248121 PHKG2P15735 406 aa29.71■■■□□ 2.35
SYNGR3-201ENST00000248121 TAF7Q15545 349 aaPredicted RBP29.71■■■□□ 2.35
SYNGR3-201ENST00000248121 BACH2Q9BYV9 841 aa29.7■■■□□ 2.34
SYNGR3-201ENST00000248121 SPG7Q9UQ90 795 aa29.69■■■□□ 2.34
SYNGR3-201ENST00000248121 KCNQ3O43525 872 aa29.67■■■□□ 2.34
SYNGR3-201ENST00000248121 ZBTB40Q9NUA8 1239 aa29.67■■■□□ 2.34
SYNGR3-201ENST00000248121 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.67■■■□□ 2.34
SYNGR3-201ENST00000248121 WNK3Q9BYP7 1800 aa29.66■■■□□ 2.34
SYNGR3-201ENST00000248121 ABCC4O15439 1325 aa29.65■■■□□ 2.34
SYNGR3-201ENST00000248121 IL2RBP14784 551 aa29.65■■■□□ 2.34
SYNGR3-201ENST00000248121 RGS3P49796 1198 aa29.65■■■□□ 2.34
SYNGR3-201ENST00000248121 TEFQ10587 303 aa29.65■■■□□ 2.34
SYNGR3-201ENST00000248121 PLEKHG2Q9H7P9 1386 aa29.64■■■□□ 2.34
SYNGR3-201ENST00000248121 IFNL2Q8IZJ0 200 aa29.64■■■□□ 2.33
SYNGR3-201ENST00000248121 RWDD1Q9H446 243 aaPredicted RBP29.64■■■□□ 2.33
SYNGR3-201ENST00000248121 JCADQ9P266 1359 aa29.61■■■□□ 2.33
SYNGR3-201ENST00000248121 NWD2Q9ULI1 1742 aa29.61■■■□□ 2.33
SYNGR3-201ENST00000248121 BTBD11A6QL63 1104 aa29.6■■■□□ 2.33
SYNGR3-201ENST00000248121 ZCRB1Q8TBF4 217 aaKnown RBP29.6■■■□□ 2.33
SYNGR3-201ENST00000248121 LRP6O75581 1613 aa29.6■■■□□ 2.33
SYNGR3-201ENST00000248121 MRC1P22897 1456 aa29.6■■■□□ 2.33
SYNGR3-201ENST00000248121 DISP2A7MBM2 1401 aa29.59■■■□□ 2.33
SYNGR3-201ENST00000248121 ZBTB7BO15156 539 aaPredicted RBP29.59■■■□□ 2.33
SYNGR3-201ENST00000248121 BABAM1Q9NWV8 329 aa29.59■■■□□ 2.33
SYNGR3-201ENST00000248121 RGS12O14924 1447 aa29.59■■■□□ 2.33
SYNGR3-201ENST00000248121 MSH5O43196 834 aa29.59■■■□□ 2.33
SYNGR3-201ENST00000248121 HDAC1Q13547 482 aaPredicted RBP29.59■■■□□ 2.33
SYNGR3-201ENST00000248121 API5Q9BZZ5 524 aaKnown RBP29.59■■■□□ 2.33
SYNGR3-201ENST00000248121 TOGARAM1Q9Y4F4 1720 aa29.58■■■□□ 2.33
SYNGR3-201ENST00000248121 SLIT2O94813 1529 aa29.58■■■□□ 2.33
SYNGR3-201ENST00000248121 EIF4A1P60842 406 aaKnown RBP29.57■■■□□ 2.32
SYNGR3-201ENST00000248121 PCDH11XQ9BZA7 1347 aa29.57■■■□□ 2.32
SYNGR3-201ENST00000248121 PCDH11YQ9BZA8 1340 aa29.57■■■□□ 2.32
SYNGR3-201ENST00000248121 NECTIN2Q92692 538 aa29.57■■■□□ 2.32
SYNGR3-201ENST00000248121 HSPA1LP34931 641 aa29.56■■■□□ 2.32
SYNGR3-201ENST00000248121 SLC52A2Q9HAB3 445 aa29.56■■■□□ 2.32
SYNGR3-201ENST00000248121 PDZRN3Q9UPQ7 1066 aa29.56■■■□□ 2.32
SYNGR3-201ENST00000248121 NFATC2IPQ8NCF5 419 aa29.55■■■□□ 2.32
SYNGR3-201ENST00000248121 DDX54Q8TDD1 881 aaKnown RBP29.55■■■□□ 2.32
SYNGR3-201ENST00000248121 DCAF5Q96JK2 942 aa29.54■■■□□ 2.32
SYNGR3-201ENST00000248121 SLC39A6Q13433 755 aa29.54■■■□□ 2.32
SYNGR3-201ENST00000248121 C8orf34Q49A92 452 aa29.53■■■□□ 2.32
SYNGR3-201ENST00000248121 C5P01031 1676 aa29.53■■■□□ 2.32
SYNGR3-201ENST00000248121 SLC4A2P04920 1241 aa29.51■■■□□ 2.31
SYNGR3-201ENST00000248121 FAM161AQ3B820 660 aa29.51■■■□□ 2.31
SYNGR3-201ENST00000248121 C8orf37Q96NL8 207 aa29.51■■■□□ 2.31
SYNGR3-201ENST00000248121 PRAMEF22A3QJZ6 481 aa29.5■■■□□ 2.31
SYNGR3-201ENST00000248121 G2E3Q7L622 706 aa29.5■■■□□ 2.31
SYNGR3-201ENST00000248121 PTPRCP08575 1304 aa29.49■■■□□ 2.31
SYNGR3-201ENST00000248121 SPATA31A1Q5TZJ5 1347 aa29.49■■■□□ 2.31
SYNGR3-201ENST00000248121 INTS3Q68E01 1043 aaKnown RBP29.49■■■□□ 2.31
SYNGR3-201ENST00000248121 HSP90AB1P08238 724 aaKnown RBP29.48■■■□□ 2.31
SYNGR3-201ENST00000248121 SMC5Q8IY18 1101 aa29.48■■■□□ 2.31
SYNGR3-201ENST00000248121 GLI3P10071 1580 aa29.47■■■□□ 2.31
SYNGR3-201ENST00000248121 C1orf115Q9H7X2 142 aa29.47■■■□□ 2.31
SYNGR3-201ENST00000248121 CACNA1FO60840 1977 aa29.47■■■□□ 2.31
SYNGR3-201ENST00000248121 HEG1Q9ULI3 1381 aa29.47■■■□□ 2.31
SYNGR3-201ENST00000248121 BCL9LQ86UU0 1499 aa29.47■■■□□ 2.31
SYNGR3-201ENST00000248121 CHMP4BQ9H444 224 aaKnown RBP29.46■■■□□ 2.31
SYNGR3-201ENST00000248121 NKX1-1Q15270 411 aaPredicted RBP29.46■■■□□ 2.31
SYNGR3-201ENST00000248121 ZNF790Q6PG37 636 aa29.45■■■□□ 2.31
SYNGR3-201ENST00000248121 EIF2S2P20042 333 aaKnown RBP29.44■■■□□ 2.3
SYNGR3-201ENST00000248121 HDGFL1Q5TGJ6 251 aa29.44■■■□□ 2.3
SYNGR3-201ENST00000248121 ITGB4P16144 1822 aa29.44■■■□□ 2.3
SYNGR3-201ENST00000248121 SPATA31A5Q5VU36 1347 aa29.44■■■□□ 2.3
SYNGR3-201ENST00000248121 SPATA31A7Q8IWB4 1347 aa29.44■■■□□ 2.3
SYNGR3-201ENST00000248121 CABP4P57796 275 aa29.44■■■□□ 2.3
SYNGR3-201ENST00000248121 PAPPAQ13219 1627 aa29.44■■■□□ 2.3
SYNGR3-201ENST00000248121 SOS1Q07889 1333 aaPredicted RBP29.43■■■□□ 2.3
SYNGR3-201ENST00000248121 SPATA31A6Q5VVP1 1343 aa29.43■■■□□ 2.3
SYNGR3-201ENST00000248121 CCDC30Q5VVM6 783 aa29.43■■■□□ 2.3
SYNGR3-201ENST00000248121 NGLY1Q96IV0 654 aa29.43■■■□□ 2.3
SYNGR3-201ENST00000248121 GIGYF1O75420 1035 aaPredicted RBP29.42■■■□□ 2.3
SYNGR3-201ENST00000248121 ANP32AP39687 249 aaKnown RBP29.42■■■□□ 2.3
SYNGR3-201ENST00000248121 SIRT2Q8IXJ6 389 aa29.42■■■□□ 2.3
SYNGR3-201ENST00000248121 TNS2Q63HR2 1409 aa29.42■■■□□ 2.3
SYNGR3-201ENST00000248121 CCDC9Q9Y3X0 531 aaKnown RBP29.41■■■□□ 2.3
SYNGR3-201ENST00000248121 UBR2Q8IWV8 1755 aa29.41■■■□□ 2.3
SYNGR3-201ENST00000248121 UNC5CLQ8IV45 518 aa29.4■■■□□ 2.3
SYNGR3-201ENST00000248121 ZNF496Q96IT1 587 aaPredicted RBP29.4■■■□□ 2.3
SYNGR3-201ENST00000248121 STK31Q9BXU1 1019 aa29.4■■■□□ 2.3
SYNGR3-201ENST00000248121 NPM2Q86SE8 214 aaKnown RBP29.4■■■□□ 2.3
SYNGR3-201ENST00000248121 ANXA1P04083 346 aa29.39■■■□□ 2.3
SYNGR3-201ENST00000248121 CHPF2Q9P2E5 772 aa29.39■■■□□ 2.3
SYNGR3-201ENST00000248121 KAT6BQ8WYB5 2073 aa29.38■■■□□ 2.29
SYNGR3-201ENST00000248121 DOT1LQ8TEK3 1739 aa29.38■■■□□ 2.29
SYNGR3-201ENST00000248121 HOXB7P09629 217 aa29.38■■■□□ 2.29
SYNGR3-201ENST00000248121 PHAXQ9H814 394 aaKnown RBP29.38■■■□□ 2.29
SYNGR3-201ENST00000248121 F6X3S4 739 aa29.37■■■□□ 2.29
SYNGR3-201ENST00000248121 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.37■■■□□ 2.29
SYNGR3-201ENST00000248121 FLIIQ13045 1269 aa29.36■■■□□ 2.29
SYNGR3-201ENST00000248121 ERVV-2B6SEH9 535 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms