RNA–Protein interactions for RNA: ENST00000239849.8

TNFSF11-201, Transcript of TNF superfamily member 11, humanhuman

TSL 5 BASIC

Gene TNFSF11, Length 911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-201ENST00000239849 TRAPPC3LQ5T215 181 aa18.39■□□□□ 0.53
TNFSF11-201ENST00000239849 LINC00116Q8NCU8 138 aa18.39■□□□□ 0.53
TNFSF11-201ENST00000239849 ROCK2O75116 1388 aaKnown RBP18.39■□□□□ 0.53
TNFSF11-201ENST00000239849 NBPF6Q5VWK0 638 aa18.38■□□□□ 0.53
TNFSF11-201ENST00000239849 NBPF4Q96M43 638 aa18.38■□□□□ 0.53
TNFSF11-201ENST00000239849 ADRA2BP18089 450 aa18.37■□□□□ 0.53
TNFSF11-201ENST00000239849 SMIM5Q71RC9 77 aa18.37■□□□□ 0.53
TNFSF11-201ENST00000239849 RTCBQ9Y3I0 505 aaKnown RBP18.37■□□□□ 0.53
TNFSF11-201ENST00000239849 N4BP2Q86UW6 1770 aaPredicted RBP18.37■□□□□ 0.53
TNFSF11-201ENST00000239849 ATP6V1AP38606 617 aa18.36■□□□□ 0.53
TNFSF11-201ENST00000239849 PIGBQ92521 554 aa18.36■□□□□ 0.53
TNFSF11-201ENST00000239849 AIDAQ96BJ3 306 aa18.35■□□□□ 0.53
TNFSF11-201ENST00000239849 A0A1W2PP64 1363 aa18.34■□□□□ 0.53
TNFSF11-201ENST00000239849 CREBZFQ9NS37 354 aa18.34■□□□□ 0.53
TNFSF11-201ENST00000239849 ARFGEF1Q9Y6D6 1849 aa18.34■□□□□ 0.53
TNFSF11-201ENST00000239849 C4AP0C0L4 1744 aa18.33■□□□□ 0.52
TNFSF11-201ENST00000239849 GLTPD2A6NH11 291 aa18.33■□□□□ 0.52
TNFSF11-201ENST00000239849 CYP27B1O15528 508 aa18.33■□□□□ 0.52
TNFSF11-201ENST00000239849 KCNA3P22001 575 aa18.33■□□□□ 0.52
TNFSF11-201ENST00000239849 CTCFP49711 727 aaPredicted RBP18.33■□□□□ 0.52
TNFSF11-201ENST00000239849 USHBP1Q8N6Y0 703 aa18.33■□□□□ 0.52
TNFSF11-201ENST00000239849 SLC12A5Q9H2X9 1139 aa18.33■□□□□ 0.52
TNFSF11-201ENST00000239849 TMOD3Q9NYL9 352 aa18.33■□□□□ 0.52
TNFSF11-201ENST00000239849 RFC4P35249 363 aa18.32■□□□□ 0.52
TNFSF11-201ENST00000239849 NKX1-1Q15270 411 aaPredicted RBP18.32■□□□□ 0.52
TNFSF11-201ENST00000239849 PUS7Q96PZ0 661 aaKnown RBP18.32■□□□□ 0.52
TNFSF11-201ENST00000239849 ITPK1Q13572 414 aa18.31■□□□□ 0.52
TNFSF11-201ENST00000239849 FAM161AQ3B820 660 aa18.31■□□□□ 0.52
TNFSF11-201ENST00000239849 SPG7Q9UQ90 795 aa18.3■□□□□ 0.52
TNFSF11-201ENST00000239849 BRCA1P38398 1863 aaKnown RBP18.3■□□□□ 0.52
TNFSF11-201ENST00000239849 FOXN1O15353 648 aa18.29■□□□□ 0.52
TNFSF11-201ENST00000239849 GYS1P13807 737 aa18.29■□□□□ 0.52
TNFSF11-201ENST00000239849 LMNB1P20700 586 aa18.29■□□□□ 0.52
TNFSF11-201ENST00000239849 RC3H1Q5TC82 1133 aaKnown RBP18.28■□□□□ 0.52
TNFSF11-201ENST00000239849 ARHGEF1Q92888 912 aaKnown RBP18.28■□□□□ 0.52
TNFSF11-201ENST00000239849 INSRP06213 1382 aa18.28■□□□□ 0.52
TNFSF11-201ENST00000239849 MAP2P11137 1827 aaKnown RBP18.28■□□□□ 0.52
TNFSF11-201ENST00000239849 RGPD2P0DJD1 1756 aa18.27■□□□□ 0.52
TNFSF11-201ENST00000239849 KDM6AO15550 1401 aaPredicted RBP18.27■□□□□ 0.52
TNFSF11-201ENST00000239849 MLLT1Q03111 559 aaPredicted RBP18.27■□□□□ 0.52
TNFSF11-201ENST00000239849 DPY19L2Q6NUT2 758 aa18.27■□□□□ 0.52
TNFSF11-201ENST00000239849 L3MBTL2Q969R5 705 aa18.27■□□□□ 0.52
TNFSF11-201ENST00000239849 MKRN1Q9UHC7 482 aaKnown RBP18.27■□□□□ 0.52
TNFSF11-201ENST00000239849 KIF24Q5T7B8 1368 aa18.27■□□□□ 0.51
TNFSF11-201ENST00000239849 ITGB4P16144 1822 aa18.26■□□□□ 0.51
TNFSF11-201ENST00000239849 ABHD8Q96I13 439 aa18.25■□□□□ 0.51
TNFSF11-201ENST00000239849 ASAP1Q9ULH1 1129 aa18.25■□□□□ 0.51
TNFSF11-201ENST00000239849 CNTNAP4Q9C0A0 1308 aa18.24■□□□□ 0.51
TNFSF11-201ENST00000239849 RPS6KA4O75676 772 aa18.24■□□□□ 0.51
TNFSF11-201ENST00000239849 RRS1Q15050 365 aaKnown RBP18.24■□□□□ 0.51
TNFSF11-201ENST00000239849 CNTNAP1P78357 1384 aa18.24■□□□□ 0.51
TNFSF11-201ENST00000239849 FLT4P35916 1363 aa18.23■□□□□ 0.51
TNFSF11-201ENST00000239849 CHADLQ6NUI6 762 aa18.23■□□□□ 0.51
TNFSF11-201ENST00000239849 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.23■□□□□ 0.51
TNFSF11-201ENST00000239849 FBLN1P23142 703 aa18.22■□□□□ 0.51
TNFSF11-201ENST00000239849 KDRP35968 1356 aa18.21■□□□□ 0.51
TNFSF11-201ENST00000239849 ATG3Q9NT62 314 aa18.21■□□□□ 0.51
TNFSF11-201ENST00000239849 CHRNA5P30532 468 aa18.2■□□□□ 0.5
TNFSF11-201ENST00000239849 RASSF7Q02833 373 aa18.2■□□□□ 0.5
TNFSF11-201ENST00000239849 HSP90AB2PQ58FF8 381 aa18.2■□□□□ 0.5
TNFSF11-201ENST00000239849 IFNL2Q8IZJ0 200 aa18.2■□□□□ 0.5
TNFSF11-201ENST00000239849 ZNF831Q5JPB2 1677 aa18.19■□□□□ 0.5
TNFSF11-201ENST00000239849 SLC24A1O60721 1099 aa18.19■□□□□ 0.5
TNFSF11-201ENST00000239849 RGS19P49795 217 aa18.19■□□□□ 0.5
TNFSF11-201ENST00000239849 LBX1P52954 281 aa18.18■□□□□ 0.5
TNFSF11-201ENST00000239849 RBM42Q9BTD8 480 aaKnown RBP18.18■□□□□ 0.5
TNFSF11-201ENST00000239849 WBP1LQ9NX94 342 aa18.18■□□□□ 0.5
TNFSF11-201ENST00000239849 SBF1O95248 1867 aa18.18■□□□□ 0.5
TNFSF11-201ENST00000239849 CARD11Q9BXL7 1154 aa18.17■□□□□ 0.5
TNFSF11-201ENST00000239849 POTECB2RU33 542 aa18.16■□□□□ 0.5
TNFSF11-201ENST00000239849 PHKG2P15735 406 aa18.16■□□□□ 0.5
TNFSF11-201ENST00000239849 USP42Q9H9J4 1324 aaKnown RBP18.16■□□□□ 0.5
TNFSF11-201ENST00000239849 NCAPD2Q15021 1401 aa18.15■□□□□ 0.5
TNFSF11-201ENST00000239849 MAP2K1Q02750 393 aaPredicted RBP18.15■□□□□ 0.5
TNFSF11-201ENST00000239849 DDR1Q08345 913 aa18.15■□□□□ 0.5
TNFSF11-201ENST00000239849 FKBP8Q14318 412 aa18.15■□□□□ 0.5
TNFSF11-201ENST00000239849 TTLL6Q8N841 843 aa18.15■□□□□ 0.5
TNFSF11-201ENST00000239849 TONSLQ96HA7 1378 aa18.15■□□□□ 0.5
TNFSF11-201ENST00000239849 ERVV-2B6SEH9 535 aa18.14■□□□□ 0.49
TNFSF11-201ENST00000239849 VEGFBP49765 207 aa18.14■□□□□ 0.49
TNFSF11-201ENST00000239849 TIAM2Q8IVF5 1701 aa18.13■□□□□ 0.49
TNFSF11-201ENST00000239849 CCDC85CA6NKD9 419 aa18.13■□□□□ 0.49
TNFSF11-201ENST00000239849 TMEM88BA6NKF7 163 aa18.13■□□□□ 0.49
TNFSF11-201ENST00000239849 POLRMTO00411 1230 aaKnown RBP18.13■□□□□ 0.49
TNFSF11-201ENST00000239849 FYB1O15117 783 aa18.13■□□□□ 0.49
TNFSF11-201ENST00000239849 HSP90AB1P08238 724 aaKnown RBP18.13■□□□□ 0.49
TNFSF11-201ENST00000239849 IQCA1LA6NCM1 817 aa18.12■□□□□ 0.49
TNFSF11-201ENST00000239849 SLC4A9Q96Q91 983 aa18.12■□□□□ 0.49
TNFSF11-201ENST00000239849 GGNBP2Q9H3C7 697 aa18.12■□□□□ 0.49
TNFSF11-201ENST00000239849 PASKQ96RG2 1323 aa18.12■□□□□ 0.49
TNFSF11-201ENST00000239849 HSPA8P11142 646 aaKnown RBP18.11■□□□□ 0.49
TNFSF11-201ENST00000239849 TM4SF1P30408 202 aa18.11■□□□□ 0.49
TNFSF11-201ENST00000239849 ERFEQ4G0M1 354 aa18.11■□□□□ 0.49
TNFSF11-201ENST00000239849 LDHDQ86WU2 507 aa18.11■□□□□ 0.49
TNFSF11-201ENST00000239849 COL5A3P25940 1745 aaPredicted RBP18.1■□□□□ 0.49
TNFSF11-201ENST00000239849 ZPR1O75312 459 aa18.1■□□□□ 0.49
TNFSF11-201ENST00000239849 SRP68Q9UHB9 627 aaKnown RBP18.1■□□□□ 0.49
TNFSF11-201ENST00000239849 NFKBIEO00221 500 aa18.09■□□□□ 0.49
TNFSF11-201ENST00000239849 H0YIN7 160 aa18.08■□□□□ 0.48
TNFSF11-201ENST00000239849 CRKLP46109 303 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms