RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 SIPA1L3O60292 1781 aaPredicted RBP19.4■□□□□ 0.7
HDHD3-201ENST00000238379 SCN11AQ9UI33 1791 aa19.4■□□□□ 0.7
HDHD3-201ENST00000238379 KCNQ3O43525 872 aa19.39■□□□□ 0.7
HDHD3-201ENST00000238379 ZCRB1Q8TBF4 217 aaKnown RBP19.39■□□□□ 0.7
HDHD3-201ENST00000238379 DCAF5Q96JK2 942 aa19.39■□□□□ 0.7
HDHD3-201ENST00000238379 ABCC4O15439 1325 aa19.39■□□□□ 0.69
HDHD3-201ENST00000238379 API5Q9BZZ5 524 aaKnown RBP19.39■□□□□ 0.69
HDHD3-201ENST00000238379 DDX19BQ9UMR2 479 aa19.39■□□□□ 0.69
HDHD3-201ENST00000238379 SLC4A2P04920 1241 aa19.38■□□□□ 0.69
HDHD3-201ENST00000238379 HSP90AB1P08238 724 aaKnown RBP19.38■□□□□ 0.69
HDHD3-201ENST00000238379 ITPRIPQ8IWB1 547 aa19.38■□□□□ 0.69
HDHD3-201ENST00000238379 SLC52A2Q9HAB3 445 aa19.38■□□□□ 0.69
HDHD3-201ENST00000238379 CCDC30Q5VVM6 783 aa19.37■□□□□ 0.69
HDHD3-201ENST00000238379 CERKQ8TCT0 537 aa19.37■□□□□ 0.69
HDHD3-201ENST00000238379 PCDH11XQ9BZA7 1347 aa19.37■□□□□ 0.69
HDHD3-201ENST00000238379 PCDH11YQ9BZA8 1340 aa19.37■□□□□ 0.69
HDHD3-201ENST00000238379 ADAMTS2O95450 1211 aa19.37■□□□□ 0.69
HDHD3-201ENST00000238379 HOXB7P09629 217 aa19.36■□□□□ 0.69
HDHD3-201ENST00000238379 CENPQQ7L2Z9 268 aaPredicted RBP19.36■□□□□ 0.69
HDHD3-201ENST00000238379 HEG1Q9ULI3 1381 aa19.36■□□□□ 0.69
HDHD3-201ENST00000238379 MRC1P22897 1456 aa19.36■□□□□ 0.69
HDHD3-201ENST00000238379 PTPRCP08575 1304 aa19.35■□□□□ 0.69
HDHD3-201ENST00000238379 RGS12O14924 1447 aa19.35■□□□□ 0.69
HDHD3-201ENST00000238379 USP35Q9P2H5 1018 aa19.35■□□□□ 0.69
HDHD3-201ENST00000238379 PCDHB15Q9Y5E8 787 aa19.35■□□□□ 0.69
HDHD3-201ENST00000238379 NFATC2IPQ8NCF5 419 aa19.35■□□□□ 0.69
HDHD3-201ENST00000238379 STK31Q9BXU1 1019 aa19.35■□□□□ 0.69
HDHD3-201ENST00000238379 G2E3Q7L622 706 aa19.34■□□□□ 0.69
HDHD3-201ENST00000238379 ZBTB40Q9NUA8 1239 aa19.34■□□□□ 0.69
HDHD3-201ENST00000238379 NUTM2BA6NNL0 878 aaPredicted RBP19.33■□□□□ 0.69
HDHD3-201ENST00000238379 NUTM2EB1AL46 878 aaPredicted RBP19.33■□□□□ 0.69
HDHD3-201ENST00000238379 IGHDP01880 384 aa19.33■□□□□ 0.69
HDHD3-201ENST00000238379 NKX1-1Q15270 411 aaPredicted RBP19.33■□□□□ 0.69
HDHD3-201ENST00000238379 HDGFL1Q5TGJ6 251 aa19.33■□□□□ 0.69
HDHD3-201ENST00000238379 NUTM2AQ8IVF1 878 aaPredicted RBP19.33■□□□□ 0.69
HDHD3-201ENST00000238379 PLCH1Q4KWH8 1693 aa19.33■□□□□ 0.68
HDHD3-201ENST00000238379 NECTIN2Q92692 538 aa19.32■□□□□ 0.68
HDHD3-201ENST00000238379 SHANK3Q9BYB0 1731 aa19.32■□□□□ 0.68
HDHD3-201ENST00000238379 DISP2A7MBM2 1401 aa19.32■□□□□ 0.68
HDHD3-201ENST00000238379 ZBTB7BO15156 539 aaPredicted RBP19.32■□□□□ 0.68
HDHD3-201ENST00000238379 ZNF790Q6PG37 636 aa19.32■□□□□ 0.68
HDHD3-201ENST00000238379 GIGYF1O75420 1035 aaPredicted RBP19.31■□□□□ 0.68
HDHD3-201ENST00000238379 INTS3Q68E01 1043 aaKnown RBP19.31■□□□□ 0.68
HDHD3-201ENST00000238379 CHMP4AQ9BY43 222 aa19.31■□□□□ 0.68
HDHD3-201ENST00000238379 CACNA1FO60840 1977 aa19.3■□□□□ 0.68
HDHD3-201ENST00000238379 JCADQ9P266 1359 aa19.3■□□□□ 0.68
HDHD3-201ENST00000238379 CABP4P57796 275 aa19.3■□□□□ 0.68
HDHD3-201ENST00000238379 SLC39A6Q13433 755 aa19.3■□□□□ 0.68
HDHD3-201ENST00000238379 DDX54Q8TDD1 881 aaKnown RBP19.3■□□□□ 0.68
HDHD3-201ENST00000238379 EIF2S2P20042 333 aaKnown RBP19.29■□□□□ 0.68
HDHD3-201ENST00000238379 FLIIQ13045 1269 aa19.29■□□□□ 0.68
HDHD3-201ENST00000238379 NRAPQ86VF7 1730 aa19.29■□□□□ 0.68
HDHD3-201ENST00000238379 ERVV-2B6SEH9 535 aa19.28■□□□□ 0.68
HDHD3-201ENST00000238379 CHMP4BQ9H444 224 aaKnown RBP19.28■□□□□ 0.68
HDHD3-201ENST00000238379 SLIT2O94813 1529 aa19.28■□□□□ 0.68
HDHD3-201ENST00000238379 TSHZ2Q9NRE2 1034 aa19.28■□□□□ 0.68
HDHD3-201ENST00000238379 PRAMEF22A3QJZ6 481 aa19.26■□□□□ 0.67
HDHD3-201ENST00000238379 CHPF2Q9P2E5 772 aa19.26■□□□□ 0.67
HDHD3-201ENST00000238379 SPATA31A1Q5TZJ5 1347 aa19.26■□□□□ 0.67
HDHD3-201ENST00000238379 NWD2Q9ULI1 1742 aa19.26■□□□□ 0.67
HDHD3-201ENST00000238379 ZNF496Q96IT1 587 aaPredicted RBP19.25■□□□□ 0.67
HDHD3-201ENST00000238379 RWDD1Q9H446 243 aaPredicted RBP19.25■□□□□ 0.67
HDHD3-201ENST00000238379 F6X3S4 739 aa19.25■□□□□ 0.67
HDHD3-201ENST00000238379 FKBP5Q13451 457 aaPredicted RBP19.25■□□□□ 0.67
HDHD3-201ENST00000238379 PHAXQ9H814 394 aaKnown RBP19.25■□□□□ 0.67
HDHD3-201ENST00000238379 HDAC1Q13547 482 aaPredicted RBP19.24■□□□□ 0.67
HDHD3-201ENST00000238379 DBF4Q9UBU7 674 aaPredicted RBP19.24■□□□□ 0.67
HDHD3-201ENST00000238379 THRAP3Q9Y2W1 955 aaKnown RBP19.24■□□□□ 0.67
HDHD3-201ENST00000238379 TTC5Q8N0Z6 440 aa19.23■□□□□ 0.67
HDHD3-201ENST00000238379 SPATA31A5Q5VU36 1347 aa19.23■□□□□ 0.67
HDHD3-201ENST00000238379 SPATA31A7Q8IWB4 1347 aa19.23■□□□□ 0.67
HDHD3-201ENST00000238379 SKAP1Q86WV1 359 aa19.23■□□□□ 0.67
HDHD3-201ENST00000238379 WNK3Q9BYP7 1800 aa19.22■□□□□ 0.67
HDHD3-201ENST00000238379 EXOC5O00471 708 aa19.22■□□□□ 0.67
HDHD3-201ENST00000238379 CCT4P50991 539 aaKnown RBP19.22■□□□□ 0.67
HDHD3-201ENST00000238379 CDCA7Q9BWT1 371 aaPredicted RBP19.22■□□□□ 0.67
HDHD3-201ENST00000238379 SPATA31A6Q5VVP1 1343 aa19.21■□□□□ 0.67
HDHD3-201ENST00000238379 SLC4A10Q6U841 1118 aa19.21■□□□□ 0.67
HDHD3-201ENST00000238379 FMNL2Q96PY5 1086 aa19.21■□□□□ 0.67
HDHD3-201ENST00000238379 SNRPA1P09661 255 aaKnown RBP19.21■□□□□ 0.67
HDHD3-201ENST00000238379 TOGARAM1Q9Y4F4 1720 aa19.2■□□□□ 0.66
HDHD3-201ENST00000238379 C5P01031 1676 aa19.2■□□□□ 0.66
HDHD3-201ENST00000238379 ANXA1P04083 346 aa19.2■□□□□ 0.66
HDHD3-201ENST00000238379 TNS2Q63HR2 1409 aa19.2■□□□□ 0.66
HDHD3-201ENST00000238379 PDIA6Q15084 440 aa19.19■□□□□ 0.66
HDHD3-201ENST00000238379 PROSER3Q2NL68 480 aa19.19■□□□□ 0.66
HDHD3-201ENST00000238379 UNC5CLQ8IV45 518 aa19.19■□□□□ 0.66
HDHD3-201ENST00000238379 NGLY1Q96IV0 654 aa19.19■□□□□ 0.66
HDHD3-201ENST00000238379 C1orf115Q9H7X2 142 aa19.19■□□□□ 0.66
HDHD3-201ENST00000238379 GLI3P10071 1580 aa19.19■□□□□ 0.66
HDHD3-201ENST00000238379 BARGINQ6ZT62 677 aa19.18■□□□□ 0.66
HDHD3-201ENST00000238379 C8orf37Q96NL8 207 aa19.18■□□□□ 0.66
HDHD3-201ENST00000238379 DDX21Q9NR30 783 aaKnown RBP eCLIP19.18■□□□□ 0.66
HDHD3-201ENST00000238379 PAPPAQ13219 1627 aa19.18■□□□□ 0.66
HDHD3-201ENST00000238379 PXDNLA1KZ92 1463 aa19.18■□□□□ 0.66
HDHD3-201ENST00000238379 BCL9LQ86UU0 1499 aa19.18■□□□□ 0.66
HDHD3-201ENST00000238379 HSPA1LP34931 641 aa19.18■□□□□ 0.66
HDHD3-201ENST00000238379 FNBP4Q8N3X1 1017 aaPredicted RBP19.18■□□□□ 0.66
HDHD3-201ENST00000238379 HYPKQ9NX55 129 aa19.18■□□□□ 0.66
HDHD3-201ENST00000238379 USP16Q9Y5T5 823 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms