RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 ZSCAN30Q86W11 494 aa7.76□□□□□ -1.17
SGIP1-201ENST00000237247 RRP7AQ9Y3A4 280 aaKnown RBP7.76□□□□□ -1.17
SGIP1-201ENST00000237247 DNTTIP2Q5QJE6 756 aaKnown RBP7.76□□□□□ -1.17
SGIP1-201ENST00000237247 CHD1LQ86WJ1 897 aa7.76□□□□□ -1.17
SGIP1-201ENST00000237247 ZNF500O60304 480 aaPredicted RBP7.75□□□□□ -1.17
SGIP1-201ENST00000237247 FCHSD2O94868 740 aa7.75□□□□□ -1.17
SGIP1-201ENST00000237247 U2AF1L5P0DN76 240 aaPredicted RBP7.75□□□□□ -1.17
SGIP1-201ENST00000237247 U2AF1Q01081 240 aaKnown RBP eCLIP7.75□□□□□ -1.17
SGIP1-201ENST00000237247 KIF2CQ99661 725 aa7.75□□□□□ -1.17
SGIP1-201ENST00000237247 PRDM10Q9NQV6 1147 aa7.75□□□□□ -1.17
SGIP1-201ENST00000237247 HDAC5Q9UQL6 1122 aa7.75□□□□□ -1.17
SGIP1-201ENST00000237247 PTMAP06454 111 aaKnown RBP7.75□□□□□ -1.17
SGIP1-201ENST00000237247 IRX5P78411 483 aaPredicted RBP7.75□□□□□ -1.17
SGIP1-201ENST00000237247 MFAP1P55081 439 aaKnown RBP7.75□□□□□ -1.17
SGIP1-201ENST00000237247 TMEM57Q8N5G2 664 aa7.75□□□□□ -1.17
SGIP1-201ENST00000237247 TRAK1Q9UPV9 953 aa7.75□□□□□ -1.17
SGIP1-201ENST00000237247 NPHP4O75161 1426 aaPredicted RBP7.74□□□□□ -1.17
SGIP1-201ENST00000237247 CCDC173Q0VFZ6 552 aa7.74□□□□□ -1.17
SGIP1-201ENST00000237247 COL24A1Q17RW2 1714 aa7.74□□□□□ -1.17
SGIP1-201ENST00000237247 DDX60Q8IY21 1712 aaKnown RBP7.74□□□□□ -1.17
SGIP1-201ENST00000237247 NOB1Q9ULX3 412 aaKnown RBP7.74□□□□□ -1.17
SGIP1-201ENST00000237247 KDRP35968 1356 aa7.74□□□□□ -1.17
SGIP1-201ENST00000237247 SOX12O15370 315 aa7.74□□□□□ -1.17
SGIP1-201ENST00000237247 TNPO1Q92973 898 aaKnown RBP7.74□□□□□ -1.17
SGIP1-201ENST00000237247 TERF2IPQ9NYB0 399 aa7.74□□□□□ -1.17
SGIP1-201ENST00000237247 TBX22Q9Y458 520 aa7.74□□□□□ -1.17
SGIP1-201ENST00000237247 K7ELQ4 463 aaPredicted RBP7.74□□□□□ -1.17
SGIP1-201ENST00000237247 ITPRIPQ8IWB1 547 aa7.74□□□□□ -1.17
SGIP1-201ENST00000237247 ITGB4P16144 1822 aa7.73□□□□□ -1.17
SGIP1-201ENST00000237247 ZNF853P0CG23 659 aa7.73□□□□□ -1.17
SGIP1-201ENST00000237247 ZNF445P59923 1031 aa7.73□□□□□ -1.17
SGIP1-201ENST00000237247 KLHL40Q2TBA0 621 aa7.73□□□□□ -1.17
SGIP1-201ENST00000237247 PLEKHG3A1L390 1219 aa7.73□□□□□ -1.17
SGIP1-201ENST00000237247 TULP2O00295 520 aa7.73□□□□□ -1.17
SGIP1-201ENST00000237247 ZBTB7BO15156 539 aaPredicted RBP7.73□□□□□ -1.17
SGIP1-201ENST00000237247 BCL2L13Q9BXK5 485 aa7.73□□□□□ -1.17
SGIP1-201ENST00000237247 IFT57Q9NWB7 429 aa7.73□□□□□ -1.17
SGIP1-201ENST00000237247 THSD7AQ9UPZ6 1657 aa7.73□□□□□ -1.17
SGIP1-201ENST00000237247 MRPL50Q8N5N7 158 aaKnown RBP7.72□□□□□ -1.17
SGIP1-201ENST00000237247 CEP120Q8N960 986 aa7.72□□□□□ -1.17
SGIP1-201ENST00000237247 UQCRHLA0A096LP55 91 aa7.72□□□□□ -1.17
SGIP1-201ENST00000237247 DIAPH1O60610 1272 aaKnown RBP7.72□□□□□ -1.17
SGIP1-201ENST00000237247 CYP2E1P05181 493 aaPredicted RBP7.72□□□□□ -1.17
SGIP1-201ENST00000237247 UQCRHP07919 91 aa7.72□□□□□ -1.17
SGIP1-201ENST00000237247 LAMB2P55268 1798 aa7.72□□□□□ -1.17
SGIP1-201ENST00000237247 MCCP23508 829 aa7.72□□□□□ -1.17
SGIP1-201ENST00000237247 NEUROD2Q15784 382 aa7.72□□□□□ -1.17
SGIP1-201ENST00000237247 TSR2Q969E8 191 aaKnown RBP7.72□□□□□ -1.17
SGIP1-201ENST00000237247 KDM4FA0A1W2PPD8 638 aa7.71□□□□□ -1.17
SGIP1-201ENST00000237247 FYB1O15117 783 aa7.71□□□□□ -1.17
SGIP1-201ENST00000237247 CDC45O75419 566 aa7.71□□□□□ -1.17
SGIP1-201ENST00000237247 PHF14O94880 888 aa7.71□□□□□ -1.17
SGIP1-201ENST00000237247 FAM193AP78312 1265 aa7.71□□□□□ -1.17
SGIP1-201ENST00000237247 RABEP1Q15276 862 aa7.71□□□□□ -1.17
SGIP1-201ENST00000237247 TICAM2Q86XR7 235 aa7.71□□□□□ -1.17
SGIP1-201ENST00000237247 TSPYL1Q9H0U9 437 aa7.71□□□□□ -1.17
SGIP1-201ENST00000237247 HSP90AB1P08238 724 aaKnown RBP7.71□□□□□ -1.18
SGIP1-201ENST00000237247 IL17RAQ96F46 866 aa7.71□□□□□ -1.18
SGIP1-201ENST00000237247 SBF2Q86WG5 1849 aa7.71□□□□□ -1.18
SGIP1-201ENST00000237247 BCORQ6W2J9 1755 aa7.7□□□□□ -1.18
SGIP1-201ENST00000237247 GOLGA6L22H0YM25 854 aa7.7□□□□□ -1.18
SGIP1-201ENST00000237247 LMOD3Q0VAK6 560 aa7.7□□□□□ -1.18
SGIP1-201ENST00000237247 NFE2L2Q16236 605 aa7.7□□□□□ -1.18
SGIP1-201ENST00000237247 CSPP1Q1MSJ5 1256 aa7.7□□□□□ -1.18
SGIP1-201ENST00000237247 ATP10DQ9P241 1426 aa7.7□□□□□ -1.18
SGIP1-201ENST00000237247 NUCB2P80303 420 aa7.7□□□□□ -1.18
SGIP1-201ENST00000237247 API5Q9BZZ5 524 aaKnown RBP7.7□□□□□ -1.18
SGIP1-201ENST00000237247 CWC22Q9HCG8 908 aaKnown RBP7.7□□□□□ -1.18
SGIP1-201ENST00000237247 OVOS2A0A0G2JMS6 1433 aa7.7□□□□□ -1.18
SGIP1-201ENST00000237247 ZNF646O15015 1829 aaPredicted RBP7.7□□□□□ -1.18
SGIP1-201ENST00000237247 VAMP4O75379 141 aa7.7□□□□□ -1.18
SGIP1-201ENST00000237247 GTF2F1P35269 517 aaKnown RBP eCLIP7.7□□□□□ -1.18
SGIP1-201ENST00000237247 GNAI1P63096 354 aa7.7□□□□□ -1.18
SGIP1-201ENST00000237247 SASS6Q6UVJ0 657 aa7.7□□□□□ -1.18
SGIP1-201ENST00000237247 COL14A1Q05707 1796 aaKnown RBP7.7□□□□□ -1.18
SGIP1-201ENST00000237247 TBC1D9Q6ZT07 1266 aa7.69□□□□□ -1.18
SGIP1-201ENST00000237247 HDGFL2Q7Z4V5 671 aaPredicted RBP7.69□□□□□ -1.18
SGIP1-201ENST00000237247 RGS12O14924 1447 aa7.69□□□□□ -1.18
SGIP1-201ENST00000237247 MCM5P33992 734 aa7.69□□□□□ -1.18
SGIP1-201ENST00000237247 CARD10Q9BWT7 1032 aa7.69□□□□□ -1.18
SGIP1-201ENST00000237247 KIAA0232Q92628 1395 aa7.69□□□□□ -1.18
SGIP1-201ENST00000237247 EFCC1Q9HA90 598 aa7.69□□□□□ -1.18
SGIP1-201ENST00000237247 ANKRD36CQ5JPF3 1778 aa7.69□□□□□ -1.18
SGIP1-201ENST00000237247 TMEM132EQ6IEE7 984 aa7.69□□□□□ -1.18
SGIP1-201ENST00000237247 PDLIM2Q96JY6 352 aa7.69□□□□□ -1.18
SGIP1-201ENST00000237247 GGT6Q6P531 493 aa7.68□□□□□ -1.18
SGIP1-201ENST00000237247 GAS2L3Q86XJ1 694 aa7.68□□□□□ -1.18
SGIP1-201ENST00000237247 INTS3Q68E01 1043 aaKnown RBP7.68□□□□□ -1.18
SGIP1-201ENST00000237247 DCTPP1Q9H773 170 aa7.68□□□□□ -1.18
SGIP1-201ENST00000237247 CABP2Q9NPB3 220 aa7.68□□□□□ -1.18
SGIP1-201ENST00000237247 NOL7Q9UMY1 257 aaKnown RBP7.68□□□□□ -1.18
SGIP1-201ENST00000237247 LY75O60449 1722 aa7.68□□□□□ -1.18
SGIP1-201ENST00000237247 ARHGEF10O15013 1369 aa7.68□□□□□ -1.18
SGIP1-201ENST00000237247 EPB41L2O43491 1005 aaKnown RBP7.68□□□□□ -1.18
SGIP1-201ENST00000237247 BAG4O95429 457 aaKnown RBP7.68□□□□□ -1.18
SGIP1-201ENST00000237247 RGPD3A6NKT7 1758 aaPredicted RBP7.67□□□□□ -1.18
SGIP1-201ENST00000237247 RGPD4Q7Z3J3 1758 aa7.67□□□□□ -1.18
SGIP1-201ENST00000237247 C1orf167Q5SNV9 1468 aa7.67□□□□□ -1.18
SGIP1-201ENST00000237247 RTL1A6NKG5 1358 aa7.67□□□□□ -1.18
SGIP1-201ENST00000237247 LNPKQ9C0E8 428 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms