RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 HSP90AB1P08238 724 aaKnown RBP23.21■■□□□ 1.31
CBX1-201ENST00000225603 BTBD11A6QL63 1104 aa23.21■■□□□ 1.31
CBX1-201ENST00000225603 NKX1-1Q15270 411 aaPredicted RBP23.21■■□□□ 1.31
CBX1-201ENST00000225603 C20orf194Q5TEA3 1177 aa23.21■■□□□ 1.31
CBX1-201ENST00000225603 SLC52A2Q9HAB3 445 aa23.21■■□□□ 1.31
CBX1-201ENST00000225603 NFATC2IPQ8NCF5 419 aa23.2■■□□□ 1.3
CBX1-201ENST00000225603 WNK3Q9BYP7 1800 aa23.2■■□□□ 1.3
CBX1-201ENST00000225603 AFF2P51816 1311 aa23.19■■□□□ 1.3
CBX1-201ENST00000225603 TCERG1O14776 1098 aaKnown RBP23.19■■□□□ 1.3
CBX1-201ENST00000225603 BARGINQ6ZT62 677 aa23.19■■□□□ 1.3
CBX1-201ENST00000225603 SMC4Q9NTJ3 1288 aa23.19■■□□□ 1.3
CBX1-201ENST00000225603 EXOC5O00471 708 aa23.18■■□□□ 1.3
CBX1-201ENST00000225603 SIPA1L3O60292 1781 aaPredicted RBP23.18■■□□□ 1.3
CBX1-201ENST00000225603 RBM19Q9Y4C8 960 aaKnown RBP23.18■■□□□ 1.3
CBX1-201ENST00000225603 CDCA7Q9BWT1 371 aaPredicted RBP23.17■■□□□ 1.3
CBX1-201ENST00000225603 EIF4A1P60842 406 aaKnown RBP23.17■■□□□ 1.3
CBX1-201ENST00000225603 FRAT1Q92837 279 aaPredicted RBP23.17■■□□□ 1.3
CBX1-201ENST00000225603 FAM98CQ17RN3 349 aaKnown RBP23.16■■□□□ 1.3
CBX1-201ENST00000225603 MRC1P22897 1456 aa23.16■■□□□ 1.3
CBX1-201ENST00000225603 KDM3BQ7LBC6 1761 aa23.16■■□□□ 1.3
CBX1-201ENST00000225603 CABP4P57796 275 aa23.16■■□□□ 1.3
CBX1-201ENST00000225603 ALDH1L2Q3SY69 923 aa23.16■■□□□ 1.3
CBX1-201ENST00000225603 ZNF428Q96B54 188 aa23.16■■□□□ 1.3
CBX1-201ENST00000225603 SLC39A6Q13433 755 aa23.15■■□□□ 1.3
CBX1-201ENST00000225603 TNS2Q63HR2 1409 aa23.15■■□□□ 1.3
CBX1-201ENST00000225603 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.14■■□□□ 1.3
CBX1-201ENST00000225603 TNNQ9UQP3 1299 aa23.14■■□□□ 1.3
CBX1-201ENST00000225603 DDB1Q16531 1140 aa23.14■■□□□ 1.29
CBX1-201ENST00000225603 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.14■■□□□ 1.29
CBX1-201ENST00000225603 MRPL50Q8N5N7 158 aaKnown RBP23.13■■□□□ 1.29
CBX1-201ENST00000225603 ERVV-2B6SEH9 535 aa23.12■■□□□ 1.29
CBX1-201ENST00000225603 NOB1Q9ULX3 412 aaKnown RBP23.12■■□□□ 1.29
CBX1-201ENST00000225603 CANXP27824 592 aaKnown RBP23.11■■□□□ 1.29
CBX1-201ENST00000225603 ZNF790Q6PG37 636 aa23.11■■□□□ 1.29
CBX1-201ENST00000225603 EXOC6Q8TAG9 804 aa23.11■■□□□ 1.29
CBX1-201ENST00000225603 TOGARAM1Q9Y4F4 1720 aa23.11■■□□□ 1.29
CBX1-201ENST00000225603 CRBNQ96SW2 442 aa23.1■■□□□ 1.29
CBX1-201ENST00000225603 BRPF1P55201 1214 aaPredicted RBP23.1■■□□□ 1.29
CBX1-201ENST00000225603 MARCH10Q8NA82 808 aaPredicted RBP23.1■■□□□ 1.29
CBX1-201ENST00000225603 PANK1Q8TE04 598 aa23.09■■□□□ 1.29
CBX1-201ENST00000225603 GJD4Q96KN9 370 aaPredicted RBP23.09■■□□□ 1.29
CBX1-201ENST00000225603 ATRNO75882 1429 aa23.09■■□□□ 1.29
CBX1-201ENST00000225603 NECTIN2Q92692 538 aa23.09■■□□□ 1.29
CBX1-201ENST00000225603 HEG1Q9ULI3 1381 aa23.08■■□□□ 1.29
CBX1-201ENST00000225603 RLBP1P12271 317 aa23.08■■□□□ 1.29
CBX1-201ENST00000225603 FBXO41Q8TF61 875 aa23.08■■□□□ 1.29
CBX1-201ENST00000225603 GLI3P10071 1580 aa23.08■■□□□ 1.29
CBX1-201ENST00000225603 PRAMEF22A3QJZ6 481 aa23.08■■□□□ 1.28
CBX1-201ENST00000225603 ZKSCAN2Q63HK3 967 aa23.08■■□□□ 1.28
CBX1-201ENST00000225603 CCDC136Q96JN2 1154 aa23.08■■□□□ 1.28
CBX1-201ENST00000225603 CLUAP1Q96AJ1 413 aa23.07■■□□□ 1.28
CBX1-201ENST00000225603 TRPC5Q9UL62 973 aaPredicted RBP23.07■■□□□ 1.28
CBX1-201ENST00000225603 GIGYF1O75420 1035 aaPredicted RBP23.06■■□□□ 1.28
CBX1-201ENST00000225603 ZNF496Q96IT1 587 aaPredicted RBP23.06■■□□□ 1.28
CBX1-201ENST00000225603 TRIM27P14373 513 aa23.06■■□□□ 1.28
CBX1-201ENST00000225603 PDE3AQ14432 1141 aa23.06■■□□□ 1.28
CBX1-201ENST00000225603 KIF16BQ96L93 1317 aa23.05■■□□□ 1.28
CBX1-201ENST00000225603 QTRT2Q9H974 415 aaKnown RBP23.05■■□□□ 1.28
CBX1-201ENST00000225603 SOS1Q07889 1333 aaPredicted RBP23.05■■□□□ 1.28
CBX1-201ENST00000225603 PIGBQ92521 554 aa23.05■■□□□ 1.28
CBX1-201ENST00000225603 TMOD3Q9NYL9 352 aa23.05■■□□□ 1.28
CBX1-201ENST00000225603 A0A0G2JS52 829 aa23.04■■□□□ 1.28
CBX1-201ENST00000225603 SLC4A2P04920 1241 aa23.04■■□□□ 1.28
CBX1-201ENST00000225603 EIF2S2P20042 333 aaKnown RBP23.04■■□□□ 1.28
CBX1-201ENST00000225603 MYT1Q01538 1121 aa23.04■■□□□ 1.28
CBX1-201ENST00000225603 ATF7IPQ6VMQ6 1270 aa23.04■■□□□ 1.28
CBX1-201ENST00000225603 TTC5Q8N0Z6 440 aa23.04■■□□□ 1.28
CBX1-201ENST00000225603 HOXB7P09629 217 aa23.03■■□□□ 1.28
CBX1-201ENST00000225603 HDGFL1Q5TGJ6 251 aa23.03■■□□□ 1.28
CBX1-201ENST00000225603 CCDC30Q5VVM6 783 aa23.03■■□□□ 1.28
CBX1-201ENST00000225603 G2E3Q7L622 706 aa23.02■■□□□ 1.28
CBX1-201ENST00000225603 COG6Q9Y2V7 657 aa23.02■■□□□ 1.28
CBX1-201ENST00000225603 THSD7AQ9UPZ6 1657 aa23.02■■□□□ 1.28
CBX1-201ENST00000225603 IPO8O15397 1037 aaKnown RBP23.01■■□□□ 1.27
CBX1-201ENST00000225603 PRIM1P49642 420 aaKnown RBP23.01■■□□□ 1.27
CBX1-201ENST00000225603 DZIP1LQ8IYY4 767 aaKnown RBP23.01■■□□□ 1.27
CBX1-201ENST00000225603 SYTL4Q96C24 671 aaPredicted RBP23■■□□□ 1.27
CBX1-201ENST00000225603 ACSBG1Q96GR2 724 aa23■■□□□ 1.27
CBX1-201ENST00000225603 ASAP1Q9ULH1 1129 aa23■■□□□ 1.27
CBX1-201ENST00000225603 ITGB4P16144 1822 aa23■■□□□ 1.27
CBX1-201ENST00000225603 ONECUT3O60422 494 aaPredicted RBP23■■□□□ 1.27
CBX1-201ENST00000225603 ARHGAP45Q92619 1136 aa23■■□□□ 1.27
CBX1-201ENST00000225603 FMNL2Q96PY5 1086 aa23■■□□□ 1.27
CBX1-201ENST00000225603 STK31Q9BXU1 1019 aa23■■□□□ 1.27
CBX1-201ENST00000225603 BCL9O00512 1426 aa22.99■■□□□ 1.27
CBX1-201ENST00000225603 KAT6BQ8WYB5 2073 aa22.99■■□□□ 1.27
CBX1-201ENST00000225603 FTSJ3Q8IY81 847 aaKnown RBP22.98■■□□□ 1.27
CBX1-201ENST00000225603 PAPPAQ13219 1627 aa22.98■■□□□ 1.27
CBX1-201ENST00000225603 ATG3Q9NT62 314 aa22.98■■□□□ 1.27
CBX1-201ENST00000225603 CHPF2Q9P2E5 772 aa22.98■■□□□ 1.27
CBX1-201ENST00000225603 DOT1LQ8TEK3 1739 aa22.98■■□□□ 1.27
CBX1-201ENST00000225603 PTCD1O75127 700 aaKnown RBP22.97■■□□□ 1.27
CBX1-201ENST00000225603 KCPQ6ZWJ8 1503 aa22.97■■□□□ 1.27
CBX1-201ENST00000225603 ANXA1P04083 346 aa22.97■■□□□ 1.27
CBX1-201ENST00000225603 SNRPA1P09661 255 aaKnown RBP22.97■■□□□ 1.27
CBX1-201ENST00000225603 SEPT12Q8IYM1 358 aa22.97■■□□□ 1.27
CBX1-201ENST00000225603 USP16Q9Y5T5 823 aa22.97■■□□□ 1.27
CBX1-201ENST00000225603 C5P01031 1676 aa22.97■■□□□ 1.27
CBX1-201ENST00000225603 TMEM57Q8N5G2 664 aa22.96■■□□□ 1.27
CBX1-201ENST00000225603 FAM182BQ5T319 152 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms