RNA–Protein interactions for RNA: ENST00000216274.9

RIPK3-201, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK3, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-201ENST00000216274 BARGINQ6ZT62 677 aa16.26■□□□□ 0.19
RIPK3-201ENST00000216274 TMEM57Q8N5G2 664 aa16.26■□□□□ 0.19
RIPK3-201ENST00000216274 FAM208AQ9UK61 1670 aaKnown RBP16.25■□□□□ 0.19
RIPK3-201ENST00000216274 HDAC1Q13547 482 aaPredicted RBP16.25■□□□□ 0.19
RIPK3-201ENST00000216274 TWISTNBQ3B726 338 aaPredicted RBP16.25■□□□□ 0.19
RIPK3-201ENST00000216274 LARP1Q6PKG0 1096 aaKnown RBP16.25■□□□□ 0.19
RIPK3-201ENST00000216274 IP6K1Q92551 441 aa16.25■□□□□ 0.19
RIPK3-201ENST00000216274 BRWD3Q6RI45 1802 aa16.24■□□□□ 0.19
RIPK3-201ENST00000216274 ERBB3P21860 1342 aa16.24■□□□□ 0.19
RIPK3-201ENST00000216274 IGSF1Q8N6C5 1336 aa16.24■□□□□ 0.19
RIPK3-201ENST00000216274 KDRP35968 1356 aa16.24■□□□□ 0.19
RIPK3-201ENST00000216274 SEPT12Q8IYM1 358 aa16.23■□□□□ 0.19
RIPK3-201ENST00000216274 PDZRN3Q9UPQ7 1066 aa16.23■□□□□ 0.19
RIPK3-201ENST00000216274 FAM98CQ17RN3 349 aaKnown RBP16.23■□□□□ 0.19
RIPK3-201ENST00000216274 TSPYL6Q8N831 410 aa16.23■□□□□ 0.19
RIPK3-201ENST00000216274 API5Q9BZZ5 524 aaKnown RBP16.23■□□□□ 0.19
RIPK3-201ENST00000216274 VIRMAQ69YN4 1812 aaKnown RBP16.22■□□□□ 0.19
RIPK3-201ENST00000216274 WNK3Q9BYP7 1800 aa16.22■□□□□ 0.19
RIPK3-201ENST00000216274 DCTN1Q14203 1278 aa16.22■□□□□ 0.19
RIPK3-201ENST00000216274 GAS2L2Q8NHY3 880 aa16.22■□□□□ 0.19
RIPK3-201ENST00000216274 CARD10Q9BWT7 1032 aa16.22■□□□□ 0.19
RIPK3-201ENST00000216274 ZBTB40Q9NUA8 1239 aa16.22■□□□□ 0.19
RIPK3-201ENST00000216274 CHL1O00533 1208 aa16.21■□□□□ 0.19
RIPK3-201ENST00000216274 HOXC9P31274 260 aa16.21■□□□□ 0.19
RIPK3-201ENST00000216274 TOM1L2Q6ZVM7 507 aa16.21■□□□□ 0.19
RIPK3-201ENST00000216274 PARP4Q9UKK3 1724 aaKnown RBP16.21■□□□□ 0.19
RIPK3-201ENST00000216274 C8orf58Q8NAV2 365 aa16.21■□□□□ 0.19
RIPK3-201ENST00000216274 CSB-PGBD3P0DP91 1061 aa16.2■□□□□ 0.18
RIPK3-201ENST00000216274 RTF1Q92541 710 aaKnown RBP16.2■□□□□ 0.18
RIPK3-201ENST00000216274 EYA1Q99502 592 aa16.2■□□□□ 0.18
RIPK3-201ENST00000216274 CDCA7Q9BWT1 371 aaPredicted RBP16.2■□□□□ 0.18
RIPK3-201ENST00000216274 ABCC4O15439 1325 aa16.19■□□□□ 0.18
RIPK3-201ENST00000216274 HTATSF1O43719 755 aaKnown RBP16.19■□□□□ 0.18
RIPK3-201ENST00000216274 ANKRD24Q8TF21 1146 aa16.19■□□□□ 0.18
RIPK3-201ENST00000216274 ELL2O00472 640 aaPredicted RBP16.18■□□□□ 0.18
RIPK3-201ENST00000216274 MCM10Q7L590 875 aa16.18■□□□□ 0.18
RIPK3-201ENST00000216274 KRT27Q7Z3Y8 459 aa16.18■□□□□ 0.18
RIPK3-201ENST00000216274 USP35Q9P2H5 1018 aa16.18■□□□□ 0.18
RIPK3-201ENST00000216274 A0A0G2JS52 829 aa16.17■□□□□ 0.18
RIPK3-201ENST00000216274 MTHFSDQ2M296 383 aaKnown RBP16.17■□□□□ 0.18
RIPK3-201ENST00000216274 DISP2A7MBM2 1401 aa16.17■□□□□ 0.18
RIPK3-201ENST00000216274 SMC5Q8IY18 1101 aa16.17■□□□□ 0.18
RIPK3-201ENST00000216274 LRRC37A3O60309 1634 aa16.15■□□□□ 0.18
RIPK3-201ENST00000216274 ZBTB7BO15156 539 aaPredicted RBP16.15■□□□□ 0.18
RIPK3-201ENST00000216274 UPF1Q92900 1129 aaKnown RBP eCLIP16.15■□□□□ 0.18
RIPK3-201ENST00000216274 NLRP2Q9NX02 1062 aa16.14■□□□□ 0.17
RIPK3-201ENST00000216274 EP400Q96L91 3159 aa16.14■□□□□ 0.17
RIPK3-201ENST00000216274 CCDC125Q86Z20 511 aa16.13■□□□□ 0.17
RIPK3-201ENST00000216274 TSPYL4Q9UJ04 414 aa16.13■□□□□ 0.17
RIPK3-201ENST00000216274 PTPRCP08575 1304 aa16.12■□□□□ 0.17
RIPK3-201ENST00000216274 RGPD2P0DJD1 1756 aa16.12■□□□□ 0.17
RIPK3-201ENST00000216274 GNAT3A8MTJ3 354 aa16.12■□□□□ 0.17
RIPK3-201ENST00000216274 GCC1Q96CN9 775 aa16.11■□□□□ 0.17
RIPK3-201ENST00000216274 BABAM1Q9NWV8 329 aa16.11■□□□□ 0.17
RIPK3-201ENST00000216274 DAXXQ9UER7 740 aaPredicted RBP16.11■□□□□ 0.17
RIPK3-201ENST00000216274 MAP3K5Q99683 1374 aa16.11■□□□□ 0.17
RIPK3-201ENST00000216274 DDB1Q16531 1140 aa16.11■□□□□ 0.17
RIPK3-201ENST00000216274 LTV1Q96GA3 475 aaPredicted RBP16.11■□□□□ 0.17
RIPK3-201ENST00000216274 UPF2Q9HAU5 1272 aaKnown RBP16.11■□□□□ 0.17
RIPK3-201ENST00000216274 NCAPD2Q15021 1401 aa16.11■□□□□ 0.17
RIPK3-201ENST00000216274 TNS2Q63HR2 1409 aa16.11■□□□□ 0.17
RIPK3-201ENST00000216274 SOS1Q07889 1333 aaPredicted RBP16.11■□□□□ 0.17
RIPK3-201ENST00000216274 IL2RBP14784 551 aa16.1■□□□□ 0.17
RIPK3-201ENST00000216274 NUCB1Q02818 461 aa16.1■□□□□ 0.17
RIPK3-201ENST00000216274 INTS3Q68E01 1043 aaKnown RBP16.1■□□□□ 0.17
RIPK3-201ENST00000216274 BCL9O00512 1426 aa16.09■□□□□ 0.17
RIPK3-201ENST00000216274 FAM196AQ6ZSG2 479 aa16.09■□□□□ 0.17
RIPK3-201ENST00000216274 OVOS2A0A0G2JMS6 1433 aa16.08■□□□□ 0.16
RIPK3-201ENST00000216274 EXOC5O00471 708 aa16.07■□□□□ 0.16
RIPK3-201ENST00000216274 KRT24Q2M2I5 525 aa16.07■□□□□ 0.16
RIPK3-201ENST00000216274 NBPF6Q5VWK0 638 aa16.07■□□□□ 0.16
RIPK3-201ENST00000216274 NBPF4Q96M43 638 aa16.07■□□□□ 0.16
RIPK3-201ENST00000216274 PLEKHG2Q9H7P9 1386 aa16.07■□□□□ 0.16
RIPK3-201ENST00000216274 CHD1LQ86WJ1 897 aa16.07■□□□□ 0.16
RIPK3-201ENST00000216274 STK31Q9BXU1 1019 aa16.05■□□□□ 0.16
RIPK3-201ENST00000216274 C1orf115Q9H7X2 142 aa16.05■□□□□ 0.16
RIPK3-201ENST00000216274 MIS18AQ9NYP9 233 aa16.05■□□□□ 0.16
RIPK3-201ENST00000216274 MEGF6O75095 1541 aa16.04■□□□□ 0.16
RIPK3-201ENST00000216274 SLC4A2P04920 1241 aa16.04■□□□□ 0.16
RIPK3-201ENST00000216274 TAF7Q15545 349 aaPredicted RBP16.04■□□□□ 0.16
RIPK3-201ENST00000216274 SBF2Q86WG5 1849 aa16.04■□□□□ 0.16
RIPK3-201ENST00000216274 RAPGEF4Q8WZA2 1011 aa16.04■□□□□ 0.16
RIPK3-201ENST00000216274 TNS1Q9HBL0 1735 aaKnown RBP16.03■□□□□ 0.16
RIPK3-201ENST00000216274 SEC24BO95487 1268 aa16.03■□□□□ 0.16
RIPK3-201ENST00000216274 CCDC30Q5VVM6 783 aa16.03■□□□□ 0.16
RIPK3-201ENST00000216274 SHANK3Q9BYB0 1731 aa16.02■□□□□ 0.16
RIPK3-201ENST00000216274 CCT4P50991 539 aaKnown RBP16.02■□□□□ 0.16
RIPK3-201ENST00000216274 SF3B2Q13435 895 aaKnown RBP16.02■□□□□ 0.16
RIPK3-201ENST00000216274 ANKRD45Q5TZF3 282 aa16.02■□□□□ 0.16
RIPK3-201ENST00000216274 RPAP2Q8IXW5 612 aaPredicted RBP16.02■□□□□ 0.16
RIPK3-201ENST00000216274 USHBP1Q8N6Y0 703 aa16.02■□□□□ 0.16
RIPK3-201ENST00000216274 MARCH10Q8NA82 808 aaPredicted RBP16.02■□□□□ 0.16
RIPK3-201ENST00000216274 IL17REQ8NFR9 667 aa16.02■□□□□ 0.16
RIPK3-201ENST00000216274 LNPKQ9C0E8 428 aa16.02■□□□□ 0.16
RIPK3-201ENST00000216274 PKD1L3Q7Z443 1732 aa16.02■□□□□ 0.15
RIPK3-201ENST00000216274 BECN1Q14457 450 aa16.02■□□□□ 0.15
RIPK3-201ENST00000216274 FAM182BQ5T319 152 aa16.02■□□□□ 0.15
RIPK3-201ENST00000216274 SIRT2Q8IXJ6 389 aa16.02■□□□□ 0.15
RIPK3-201ENST00000216274 TBC1D32Q96NH3 1257 aa16.02■□□□□ 0.15
RIPK3-201ENST00000216274 TATP17735 454 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms