RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 IFNL2Q8IZJ0 200 aa25.08■■□□□ 1.6
TNFRSF1A-201ENST00000162749 AEBP2Q6ZN18 517 aaPredicted RBP25.07■■□□□ 1.6
TNFRSF1A-201ENST00000162749 ITPRIPQ8IWB1 547 aa25.07■■□□□ 1.6
TNFRSF1A-201ENST00000162749 BTBD11A6QL63 1104 aa25.06■■□□□ 1.6
TNFRSF1A-201ENST00000162749 UBAP1LF5GYI3 381 aa25.06■■□□□ 1.6
TNFRSF1A-201ENST00000162749 SOS1Q07889 1333 aaPredicted RBP25.06■■□□□ 1.6
TNFRSF1A-201ENST00000162749 PLCH1Q4KWH8 1693 aa25.06■■□□□ 1.6
TNFRSF1A-201ENST00000162749 DDX19BQ9UMR2 479 aa25.06■■□□□ 1.6
TNFRSF1A-201ENST00000162749 MSH5O43196 834 aa25.05■■□□□ 1.6
TNFRSF1A-201ENST00000162749 ABCC4O15439 1325 aa25.05■■□□□ 1.6
TNFRSF1A-201ENST00000162749 EIF4A1P60842 406 aaKnown RBP25.04■■□□□ 1.6
TNFRSF1A-201ENST00000162749 SLC4A2P04920 1241 aa25.04■■□□□ 1.6
TNFRSF1A-201ENST00000162749 KCNQ3O43525 872 aa25.03■■□□□ 1.6
TNFRSF1A-201ENST00000162749 IL2RBP14784 551 aa25.03■■□□□ 1.6
TNFRSF1A-201ENST00000162749 CENPQQ7L2Z9 268 aaPredicted RBP25.03■■□□□ 1.6
TNFRSF1A-201ENST00000162749 RGS12O14924 1447 aa25.03■■□□□ 1.6
TNFRSF1A-201ENST00000162749 API5Q9BZZ5 524 aaKnown RBP25.02■■□□□ 1.6
TNFRSF1A-201ENST00000162749 MRC1P22897 1456 aa25.02■■□□□ 1.6
TNFRSF1A-201ENST00000162749 DCAF5Q96JK2 942 aa25.01■■□□□ 1.59
TNFRSF1A-201ENST00000162749 SLC52A2Q9HAB3 445 aa25.01■■□□□ 1.59
TNFRSF1A-201ENST00000162749 PCDHB15Q9Y5E8 787 aa25.01■■□□□ 1.59
TNFRSF1A-201ENST00000162749 PCDH11XQ9BZA7 1347 aa25.01■■□□□ 1.59
TNFRSF1A-201ENST00000162749 PCDH11YQ9BZA8 1340 aa25.01■■□□□ 1.59
TNFRSF1A-201ENST00000162749 CCDC30Q5VVM6 783 aa25■■□□□ 1.59
TNFRSF1A-201ENST00000162749 ZCRB1Q8TBF4 217 aaKnown RBP25■■□□□ 1.59
TNFRSF1A-201ENST00000162749 PTPRCP08575 1304 aa25■■□□□ 1.59
TNFRSF1A-201ENST00000162749 USP35Q9P2H5 1018 aa25■■□□□ 1.59
TNFRSF1A-201ENST00000162749 ANP32EQ9BTT0 268 aa24.99■■□□□ 1.59
TNFRSF1A-201ENST00000162749 STK31Q9BXU1 1019 aa24.99■■□□□ 1.59
TNFRSF1A-201ENST00000162749 NRAPQ86VF7 1730 aa24.99■■□□□ 1.59
TNFRSF1A-201ENST00000162749 HSP90AB1P08238 724 aaKnown RBP24.98■■□□□ 1.59
TNFRSF1A-201ENST00000162749 ADAMTS2O95450 1211 aa24.98■■□□□ 1.59
TNFRSF1A-201ENST00000162749 IGHDP01880 384 aa24.98■■□□□ 1.59
TNFRSF1A-201ENST00000162749 HOXB7P09629 217 aa24.98■■□□□ 1.59
TNFRSF1A-201ENST00000162749 HEG1Q9ULI3 1381 aa24.97■■□□□ 1.59
TNFRSF1A-201ENST00000162749 WNK3Q9BYP7 1800 aa24.97■■□□□ 1.59
TNFRSF1A-201ENST00000162749 G2E3Q7L622 706 aa24.97■■□□□ 1.59
TNFRSF1A-201ENST00000162749 NFATC2IPQ8NCF5 419 aa24.97■■□□□ 1.59
TNFRSF1A-201ENST00000162749 NECTIN2Q92692 538 aa24.97■■□□□ 1.59
TNFRSF1A-201ENST00000162749 ZBTB40Q9NUA8 1239 aa24.97■■□□□ 1.59
TNFRSF1A-201ENST00000162749 HDGFL1Q5TGJ6 251 aa24.96■■□□□ 1.59
TNFRSF1A-201ENST00000162749 NWD2Q9ULI1 1742 aa24.94■■□□□ 1.58
TNFRSF1A-201ENST00000162749 ZBTB7BO15156 539 aaPredicted RBP24.93■■□□□ 1.58
TNFRSF1A-201ENST00000162749 ZNF790Q6PG37 636 aa24.93■■□□□ 1.58
TNFRSF1A-201ENST00000162749 C5P01031 1676 aa24.93■■□□□ 1.58
TNFRSF1A-201ENST00000162749 DISP2A7MBM2 1401 aa24.93■■□□□ 1.58
TNFRSF1A-201ENST00000162749 NUTM2BA6NNL0 878 aaPredicted RBP24.92■■□□□ 1.58
TNFRSF1A-201ENST00000162749 NUTM2EB1AL46 878 aaPredicted RBP24.92■■□□□ 1.58
TNFRSF1A-201ENST00000162749 GIGYF1O75420 1035 aaPredicted RBP24.92■■□□□ 1.58
TNFRSF1A-201ENST00000162749 FLIIQ13045 1269 aa24.92■■□□□ 1.58
TNFRSF1A-201ENST00000162749 INTS3Q68E01 1043 aaKnown RBP24.92■■□□□ 1.58
TNFRSF1A-201ENST00000162749 NUTM2AQ8IVF1 878 aaPredicted RBP24.92■■□□□ 1.58
TNFRSF1A-201ENST00000162749 EIF2S2P20042 333 aaKnown RBP24.92■■□□□ 1.58
TNFRSF1A-201ENST00000162749 SLC39A6Q13433 755 aa24.92■■□□□ 1.58
TNFRSF1A-201ENST00000162749 CERKQ8TCT0 537 aa24.92■■□□□ 1.58
TNFRSF1A-201ENST00000162749 N4BP2Q86UW6 1770 aaPredicted RBP24.91■■□□□ 1.58
TNFRSF1A-201ENST00000162749 NKX1-1Q15270 411 aaPredicted RBP24.91■■□□□ 1.58
TNFRSF1A-201ENST00000162749 TOGARAM1Q9Y4F4 1720 aa24.9■■□□□ 1.58
TNFRSF1A-201ENST00000162749 SKAP1Q86WV1 359 aa24.9■■□□□ 1.58
TNFRSF1A-201ENST00000162749 DDX54Q8TDD1 881 aaKnown RBP24.9■■□□□ 1.58
TNFRSF1A-201ENST00000162749 CHMP4AQ9BY43 222 aa24.89■■□□□ 1.58
TNFRSF1A-201ENST00000162749 CHMP4BQ9H444 224 aaKnown RBP24.89■■□□□ 1.58
TNFRSF1A-201ENST00000162749 KAT6BQ8WYB5 2073 aa24.89■■□□□ 1.58
TNFRSF1A-201ENST00000162749 CABP4P57796 275 aa24.89■■□□□ 1.57
TNFRSF1A-201ENST00000162749 CHPF2Q9P2E5 772 aa24.88■■□□□ 1.57
TNFRSF1A-201ENST00000162749 PRAMEF22A3QJZ6 481 aa24.88■■□□□ 1.57
TNFRSF1A-201ENST00000162749 FKBP5Q13451 457 aaPredicted RBP24.88■■□□□ 1.57
TNFRSF1A-201ENST00000162749 SLIT2O94813 1529 aa24.87■■□□□ 1.57
TNFRSF1A-201ENST00000162749 JCADQ9P266 1359 aa24.87■■□□□ 1.57
TNFRSF1A-201ENST00000162749 UBR2Q8IWV8 1755 aa24.87■■□□□ 1.57
TNFRSF1A-201ENST00000162749 F6X3S4 739 aa24.87■■□□□ 1.57
TNFRSF1A-201ENST00000162749 RWDD1Q9H446 243 aaPredicted RBP24.87■■□□□ 1.57
TNFRSF1A-201ENST00000162749 PAPPAQ13219 1627 aa24.86■■□□□ 1.57
TNFRSF1A-201ENST00000162749 ERVV-2B6SEH9 535 aa24.86■■□□□ 1.57
TNFRSF1A-201ENST00000162749 PHAXQ9H814 394 aaKnown RBP24.86■■□□□ 1.57
TNFRSF1A-201ENST00000162749 GLI3P10071 1580 aa24.85■■□□□ 1.57
TNFRSF1A-201ENST00000162749 ITGB4P16144 1822 aa24.85■■□□□ 1.57
TNFRSF1A-201ENST00000162749 HDAC1Q13547 482 aaPredicted RBP24.85■■□□□ 1.57
TNFRSF1A-201ENST00000162749 ZNF496Q96IT1 587 aaPredicted RBP24.85■■□□□ 1.57
TNFRSF1A-201ENST00000162749 TTC5Q8N0Z6 440 aa24.84■■□□□ 1.57
TNFRSF1A-201ENST00000162749 SPATA31A1Q5TZJ5 1347 aa24.83■■□□□ 1.57
TNFRSF1A-201ENST00000162749 SLC4A10Q6U841 1118 aa24.83■■□□□ 1.57
TNFRSF1A-201ENST00000162749 C1orf115Q9H7X2 142 aa24.83■■□□□ 1.57
TNFRSF1A-201ENST00000162749 DBF4Q9UBU7 674 aaPredicted RBP24.83■■□□□ 1.57
TNFRSF1A-201ENST00000162749 LAMB4A4D0S4 1761 aa24.82■■□□□ 1.56
TNFRSF1A-201ENST00000162749 PXDNLA1KZ92 1463 aa24.82■■□□□ 1.56
TNFRSF1A-201ENST00000162749 ANXA1P04083 346 aa24.81■■□□□ 1.56
TNFRSF1A-201ENST00000162749 CCT4P50991 539 aaKnown RBP24.81■■□□□ 1.56
TNFRSF1A-201ENST00000162749 FMNL2Q96PY5 1086 aa24.8■■□□□ 1.56
TNFRSF1A-201ENST00000162749 TNS2Q63HR2 1409 aa24.8■■□□□ 1.56
TNFRSF1A-201ENST00000162749 THRAP3Q9Y2W1 955 aaKnown RBP24.8■■□□□ 1.56
TNFRSF1A-201ENST00000162749 PROSER3Q2NL68 480 aa24.79■■□□□ 1.56
TNFRSF1A-201ENST00000162749 SPATA31A5Q5VU36 1347 aa24.78■■□□□ 1.56
TNFRSF1A-201ENST00000162749 SPATA31A7Q8IWB4 1347 aa24.78■■□□□ 1.56
TNFRSF1A-201ENST00000162749 MEIS3Q99687 375 aa24.78■■□□□ 1.56
TNFRSF1A-201ENST00000162749 KCPQ6ZWJ8 1503 aa24.77■■□□□ 1.56
TNFRSF1A-201ENST00000162749 LRP6O75581 1613 aa24.77■■□□□ 1.56
TNFRSF1A-201ENST00000162749 EXOC5O00471 708 aa24.77■■□□□ 1.56
TNFRSF1A-201ENST00000162749 SNRPA1P09661 255 aaKnown RBP24.77■■□□□ 1.56
TNFRSF1A-201ENST00000162749 CDCA7Q9BWT1 371 aaPredicted RBP24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms