RNA–Protein interactions for RNA: ENSMUST00000227819.1

Ldb3-207, Transcript of LIM domain-binding protein 3, mousemouse

BASIC

Gene Ldb3, Length 1,499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-207ENSMUST00000227819 Kcnn1Q9EQR3 537 aa18.51■□□□□ 0.55
Ldb3-207ENSMUST00000227819 Ric1Q69ZJ7 1422 aa18.5■□□□□ 0.55
Ldb3-207ENSMUST00000227819 Tcerg1Q8CGF7 1100 aaKnown RBP18.5■□□□□ 0.55
Ldb3-207ENSMUST00000227819 U2af1Q9D883 239 aaKnown RBP18.5■□□□□ 0.55
Ldb3-207ENSMUST00000227819 Kndc1Q0KK55 1742 aa18.5■□□□□ 0.55
Ldb3-207ENSMUST00000227819 Tlr8P58682 1032 aa18.49■□□□□ 0.55
Ldb3-207ENSMUST00000227819 Efcab2Q9CQ46 164 aa18.49■□□□□ 0.55
Ldb3-207ENSMUST00000227819 Cabp2Q9JLK4 216 aa18.49■□□□□ 0.55
Ldb3-207ENSMUST00000227819 Tiam2Q6ZPF3 1715 aa18.48■□□□□ 0.55
Ldb3-207ENSMUST00000227819 Yy1Q00899 414 aa18.47■□□□□ 0.55
Ldb3-207ENSMUST00000227819 Slfnl1Q8BHW9 410 aa18.47■□□□□ 0.55
Ldb3-207ENSMUST00000227819 GsdmaQ9EST1 446 aa18.47■□□□□ 0.55
Ldb3-207ENSMUST00000227819 Gpr162Q3UN16 588 aa18.46■□□□□ 0.55
Ldb3-207ENSMUST00000227819 Clcn1Q64347 994 aa18.46■□□□□ 0.55
Ldb3-207ENSMUST00000227819 Nav1Q8CH77 1875 aa18.46■□□□□ 0.55
Ldb3-207ENSMUST00000227819 Togaram1Q6A070 1776 aaKnown RBP18.46■□□□□ 0.55
Ldb3-207ENSMUST00000227819 1810065E05RikQ5NC41 235 aa18.45■□□□□ 0.54
Ldb3-207ENSMUST00000227819 ScaperF8VQ70 1398 aaKnown RBP18.44■□□□□ 0.54
Ldb3-207ENSMUST00000227819 Syde2E9PUP1 1314 aa18.44■□□□□ 0.54
Ldb3-207ENSMUST00000227819 Rapgefl1Q68EF8 662 aa18.44■□□□□ 0.54
Ldb3-207ENSMUST00000227819 Rnaseh2aQ9CWY8 301 aa18.44■□□□□ 0.54
Ldb3-207ENSMUST00000227819 Pde4dQ01063 747 aa18.42■□□□□ 0.54
Ldb3-207ENSMUST00000227819 Lrrc43Q3V0L5 667 aa18.42■□□□□ 0.54
Ldb3-207ENSMUST00000227819 Amhr2Q8K592 568 aa18.42■□□□□ 0.54
Ldb3-207ENSMUST00000227819 Cyp2c67Q569X9 491 aa18.41■□□□□ 0.54
Ldb3-207ENSMUST00000227819 Srp68Q8BMA6 625 aaKnown RBP18.41■□□□□ 0.54
Ldb3-207ENSMUST00000227819 HmcesQ8R1M0 353 aaKnown RBP18.41■□□□□ 0.54
Ldb3-207ENSMUST00000227819 Slc34a2Q9DBP0 697 aa18.41■□□□□ 0.54
Ldb3-207ENSMUST00000227819 Abcc12Q80WJ6 1366 aa18.41■□□□□ 0.54
Ldb3-207ENSMUST00000227819 DiexfQ8BTT6 772 aaKnown RBP18.4■□□□□ 0.54
Ldb3-207ENSMUST00000227819 Camkk2Q8C078 588 aa18.4■□□□□ 0.54
Ldb3-207ENSMUST00000227819 Iqcf3Q9D498 203 aa18.4■□□□□ 0.54
Ldb3-207ENSMUST00000227819 PigbQ9JJQ0 542 aa18.4■□□□□ 0.54
Ldb3-207ENSMUST00000227819 Taf1dQ9D4V4 322 aa18.39■□□□□ 0.54
Ldb3-207ENSMUST00000227819 Adcy9P51830 1353 aa18.39■□□□□ 0.53
Ldb3-207ENSMUST00000227819 Igf2rQ07113 2483 aaKnown RBP18.39■□□□□ 0.53
Ldb3-207ENSMUST00000227819 Cyp2c69E9PXC3 491 aa18.39■□□□□ 0.53
Ldb3-207ENSMUST00000227819 Tgfb2P27090 414 aa18.39■□□□□ 0.53
Ldb3-207ENSMUST00000227819 Cyp2c40P56657 491 aa18.39■□□□□ 0.53
Ldb3-207ENSMUST00000227819 Atp1b3P97370 278 aa18.39■□□□□ 0.53
Ldb3-207ENSMUST00000227819 Zbtb1Q91VL9 713 aa18.39■□□□□ 0.53
Ldb3-207ENSMUST00000227819 StrcQ8VIM6 1809 aa18.38■□□□□ 0.53
Ldb3-207ENSMUST00000227819 Rtf1A2AQ19 715 aaKnown RBP18.38■□□□□ 0.53
Ldb3-207ENSMUST00000227819 Irx6Q9ER75 438 aa18.38■□□□□ 0.53
Ldb3-207ENSMUST00000227819 Casz1Q9CWL2 1761 aa18.37■□□□□ 0.53
Ldb3-207ENSMUST00000227819 Zfyve9A2A8R0 1397 aa18.37■□□□□ 0.53
Ldb3-207ENSMUST00000227819 Slurp2P0DP59 97 aa18.36■□□□□ 0.53
Ldb3-207ENSMUST00000227819 Q4VA45 678 aa18.36■□□□□ 0.53
Ldb3-207ENSMUST00000227819 Btbd11Q6GQW0 1109 aa18.36■□□□□ 0.53
Ldb3-207ENSMUST00000227819 Q7TT23 1179 aa18.35■□□□□ 0.53
Ldb3-207ENSMUST00000227819 Tktl2Q9D4D4 627 aa18.35■□□□□ 0.53
Ldb3-207ENSMUST00000227819 ArsiQ32KI9 573 aa18.34■□□□□ 0.53
Ldb3-207ENSMUST00000227819 Trip6Q9Z1Y4 480 aa18.34■□□□□ 0.53
Ldb3-207ENSMUST00000227819 Myo5bP21271 1818 aa18.33■□□□□ 0.53
Ldb3-207ENSMUST00000227819 Strn4P58404 760 aa18.33■□□□□ 0.53
Ldb3-207ENSMUST00000227819 Nip7Q9CXK8 180 aaKnown RBP18.33■□□□□ 0.53
Ldb3-207ENSMUST00000227819 Aebp2Q9Z248 504 aaKnown RBP18.33■□□□□ 0.53
Ldb3-207ENSMUST00000227819 MetP16056 1379 aa18.33■□□□□ 0.53
Ldb3-207ENSMUST00000227819 Col4a1P02463 1669 aa18.32■□□□□ 0.52
Ldb3-207ENSMUST00000227819 Apaf1O88879 1249 aa18.32■□□□□ 0.52
Ldb3-207ENSMUST00000227819 SnrkQ8VDU5 748 aa18.32■□□□□ 0.52
Ldb3-207ENSMUST00000227819 Nsfl1cQ9CZ44 370 aaKnown RBP18.32■□□□□ 0.52
Ldb3-207ENSMUST00000227819 Cfap70D3YVL2 1141 aa18.31■□□□□ 0.52
Ldb3-207ENSMUST00000227819 FktnQ8R507 461 aa18.31■□□□□ 0.52
Ldb3-207ENSMUST00000227819 Anp32bQ9EST5 272 aaKnown RBP18.31■□□□□ 0.52
Ldb3-207ENSMUST00000227819 Mapk8ip3Q9ESN9 1337 aa18.31■□□□□ 0.52
Ldb3-207ENSMUST00000227819 Wdhd1P59328 1117 aa18.3■□□□□ 0.52
Ldb3-207ENSMUST00000227819 TrhQ62361 256 aa18.3■□□□□ 0.52
Ldb3-207ENSMUST00000227819 Prim1P20664 417 aa18.29■□□□□ 0.52
Ldb3-207ENSMUST00000227819 Cnnm1Q0GA42 951 aa18.29■□□□□ 0.52
Ldb3-207ENSMUST00000227819 Rpgrip1lQ8CG73 1264 aa18.29■□□□□ 0.52
Ldb3-207ENSMUST00000227819 Mylk2Q8VCR8 613 aa18.29■□□□□ 0.52
Ldb3-207ENSMUST00000227819 Frmpd3A0A140LIW3 1774 aa18.29■□□□□ 0.52
Ldb3-207ENSMUST00000227819 Gm12185Q5NCB2 835 aa18.28■□□□□ 0.52
Ldb3-207ENSMUST00000227819 Ggnbp2Q5SV77 696 aa18.28■□□□□ 0.52
Ldb3-207ENSMUST00000227819 Ubn2Q80WC1 1314 aa18.27■□□□□ 0.52
Ldb3-207ENSMUST00000227819 Rbm26Q6NZN0 1012 aaKnown RBP18.27■□□□□ 0.52
Ldb3-207ENSMUST00000227819 B4galnt4Q766D5 1034 aa18.26■□□□□ 0.51
Ldb3-207ENSMUST00000227819 IarsQ8BU30 1262 aa18.26■□□□□ 0.51
Ldb3-207ENSMUST00000227819 Spon1Q8VCC9 807 aa18.26■□□□□ 0.51
Ldb3-207ENSMUST00000227819 Rapgef4Q9EQZ6 1011 aa18.26■□□□□ 0.51
Ldb3-207ENSMUST00000227819 TefQ9JLC6 301 aa18.26■□□□□ 0.51
Ldb3-207ENSMUST00000227819 Prr5lA2AVJ5 370 aa18.25■□□□□ 0.51
Ldb3-207ENSMUST00000227819 EgfrQ01279 1210 aa18.25■□□□□ 0.51
Ldb3-207ENSMUST00000227819 Adgre1Q61549 931 aa18.25■□□□□ 0.51
Ldb3-207ENSMUST00000227819 Prkab2Q6PAM0 271 aa18.25■□□□□ 0.51
Ldb3-207ENSMUST00000227819 Flad1Q8R123 492 aa18.25■□□□□ 0.51
Ldb3-207ENSMUST00000227819 Ddx60E9PZQ1 1711 aa18.24■□□□□ 0.51
Ldb3-207ENSMUST00000227819 Wdr66E9Q743 1299 aa18.24■□□□□ 0.51
Ldb3-207ENSMUST00000227819 Cyp2c68K7N6C2 491 aa18.24■□□□□ 0.51
Ldb3-207ENSMUST00000227819 Nedd4P46935 887 aaKnown RBP18.24■□□□□ 0.51
Ldb3-207ENSMUST00000227819 Akap2O54931 893 aa18.23■□□□□ 0.51
Ldb3-207ENSMUST00000227819 Gigyf1Q99MR1 1044 aaKnown RBP18.23■□□□□ 0.51
Ldb3-207ENSMUST00000227819 Senp3Q9EP97 568 aaKnown RBP18.23■□□□□ 0.51
Ldb3-207ENSMUST00000227819 Dpf1Q9QX66 387 aa18.23■□□□□ 0.51
Ldb3-207ENSMUST00000227819 Col4a5Q63ZW6 1691 aa18.23■□□□□ 0.51
Ldb3-207ENSMUST00000227819 Klrk1O54709 232 aa18.22■□□□□ 0.51
Ldb3-207ENSMUST00000227819 Bcl2l13P59017 434 aa18.22■□□□□ 0.51
Ldb3-207ENSMUST00000227819 Iqsec3Q3TES0 1195 aa18.22■□□□□ 0.51
Ldb3-207ENSMUST00000227819 Megf6Q80V70 1572 aa18.22■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms