RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Bicd2Q921C5 820 aa16.44■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 AU022751B1B0V2 589 aa16.44■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Ppip5k2Q6ZQB6 1129 aa16.44■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Washc4Q3UMB9 1173 aa16.43■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Cadps2Q8BYR5 1297 aa16.43■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Riok1Q922Q2 567 aa16.43■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Pprc1Q6NZN1 1644 aa16.43■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Abcc3B2RX12 1523 aa16.43■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Zfyve16Q80U44 1528 aa16.43■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Rbm27Q5SFM8 1060 aaKnown RBP16.43■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Dmrt2Q8BG36 561 aa16.43■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Erc1Q99MI1 1120 aa16.43■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Ehmt1Q5DW34 1296 aa16.43■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Kif21bQ9QXL1 1668 aa16.43■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Eya1P97767 591 aa16.42■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 GpkowQ56A08 488 aa16.42■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Pdcl2Q78Y63 240 aa16.42■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Hoxc9P09633 260 aa16.42■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Fbln2P37889 1221 aa16.42■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Soga3Q6NZL0 945 aa16.42■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 PogkQ80TC5 607 aa16.42■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Tex14Q7M6U3 1450 aa16.42■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Eif2ak4Q9QZ05 1648 aa16.42■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Slc26a8Q8R0C3 999 aa16.42■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Liat1Q810M6 228 aa16.41■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Tmem87bQ8BKU8 555 aa16.41■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Slain2Q8CI08 581 aa16.41■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Dot1lQ6XZL8 1540 aa16.41■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Mcm4P49717 862 aa16.41■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Taf7Q9R1C0 341 aa16.41■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Paxip1Q6NZQ4 1056 aa16.41■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Ankrd50F7BE84 1390 aa16.41■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Map3k2Q61083 619 aa16.4■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Rec8Q8C5S7 591 aa16.4■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Cwc15Q9JHS9 229 aaKnown RBP16.4■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 NhsB1AV60 1647 aa16.4■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Gnat3Q3V3I2 354 aa16.4■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Chmp4cQ9D7F7 232 aa16.4■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Phlpp2Q8BXA7 1320 aa16.4■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Kiaa1210E9Q0C6 1637 aa16.4■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Klhdc4Q921I2 584 aa16.4■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Nlgn1Q99K10 843 aa16.4■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 NcapgE9PWG6 1004 aa16.4■□□□□ 0.22
Pcdha1-202ENSMUST00000193839 Myd88P22366 296 aa16.39■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Gpatch3Q8BIY1 525 aa16.39■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Mad1l1Q9WTX8 717 aaKnown RBP16.39■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Vamp4O70480 141 aa16.39■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Usp48Q3V0C5 1052 aa16.39■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Krt82Q99M74 516 aa16.39■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Mctp2Q5RJH2 878 aa16.38■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Kcna6Q61923 529 aa16.38■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Brf1Q8CFK2 676 aa16.38■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Trim29Q8R2Q0 587 aa16.38■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Smarca5Q91ZW3 1051 aaKnown RBP16.38■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Cul7Q8VE73 1689 aa16.38■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Zrsr2Q62377 462 aaKnown RBP16.38■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Hook1Q8BIL5 728 aa16.38■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Rapgef3Q8VCC8 918 aa16.38■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Rrs1Q9CYH6 365 aaKnown RBP16.38■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Ipo7Q9EPL8 1038 aaKnown RBP16.38■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Bag3Q9JLV1 577 aaKnown RBP16.38■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Kiaa0753Q6A000 959 aa16.38■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Prr29B1ARI9 187 aa16.37■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Rnf214Q8BFU3 668 aaKnown RBP16.37■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Fam13bQ8K2H3 851 aa16.37■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Sytl4Q9R0Q1 673 aa16.37■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Abca8bQ8K440 1620 aa16.37■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Scaf11E9PZM7 1456 aaKnown RBP16.37■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Idi1P58044 227 aa16.37■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Rims1Q99NE5 1463 aa16.37■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 ThemisQ8BGW0 636 aa16.37■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Rbm28Q8CGC6 750 aaKnown RBP16.37■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 ImpactO55091 318 aa16.37■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 ImmtQ8CAQ8 757 aaKnown RBP16.37■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Anapc15-psA0A140T8L6 141 aa16.36■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Sugp2Q8CH09 1067 aa16.36■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 GckrQ91X44 587 aa16.36■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Bicdl1A0JNT9 577 aa16.36■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Mns1Q61884 491 aa16.36■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 SrrtQ99MR6 875 aaKnown RBP16.36■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Cwc25Q9DBF7 416 aa16.36■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Tulp4Q9JIL5 1547 aa16.36■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Fam135bQ9DAI6 1403 aa16.36■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Znhit6Q3UFB2 460 aaKnown RBP16.36■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Lrrcc1Q69ZB0 1026 aa16.36■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Fam43aQ8BUP8 424 aa16.36■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Uggt1Q6P5E4 1551 aa16.36■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Fam83gQ5SWY7 812 aa16.36■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Rbm10Q99KG3 930 aaKnown RBP16.36■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Wdhd1P59328 1117 aa16.35■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Stk11ipQ3TAA7 1072 aa16.35■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Dusp9Q7TNL7 452 aa16.35■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Emilin2Q8K482 1074 aa16.35■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Krt84Q99M73 603 aa16.35■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Duxf3A0A0N4SV92 674 aa16.35■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Abl1P00520 1123 aa16.35■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 DmtnQ9WV69 405 aa16.35■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Wdr17E9Q271 1322 aa16.35■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Pnmal2G3X9N3 661 aa16.35■□□□□ 0.21
Pcdha1-202ENSMUST00000193839 Aplp1Q03157 653 aa16.35■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms