RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 TefQ9JLC6 301 aa9.47□□□□□ -0.89
Usp40-204ENSMUST00000187758 Pm20d1Q8C165 503 aa9.46□□□□□ -0.89
Usp40-204ENSMUST00000187758 Ginm1Q91WR6 327 aa9.46□□□□□ -0.89
Usp40-204ENSMUST00000187758 Tnks1bp1P58871 1720 aa9.46□□□□□ -0.89
Usp40-204ENSMUST00000187758 Msh6P54276 1358 aaKnown RBP9.46□□□□□ -0.89
Usp40-204ENSMUST00000187758 Psrc1Q9D0P7 329 aa9.46□□□□□ -0.9
Usp40-204ENSMUST00000187758 Ankrd44B2RXR6 993 aa9.46□□□□□ -0.9
Usp40-204ENSMUST00000187758 Aifm3Q3TY86 605 aa9.46□□□□□ -0.9
Usp40-204ENSMUST00000187758 Cnnm1Q0GA42 951 aa9.45□□□□□ -0.9
Usp40-204ENSMUST00000187758 GckrQ91X44 587 aa9.45□□□□□ -0.9
Usp40-204ENSMUST00000187758 Myo5bP21271 1818 aa9.45□□□□□ -0.9
Usp40-204ENSMUST00000187758 Exoc5Q3TPX4 708 aa9.45□□□□□ -0.9
Usp40-204ENSMUST00000187758 Sik1Q60670 779 aa9.45□□□□□ -0.9
Usp40-204ENSMUST00000187758 ApobrQ8VBT6 942 aa9.45□□□□□ -0.9
Usp40-204ENSMUST00000187758 Armcx1Q9CX83 456 aa9.45□□□□□ -0.9
Usp40-204ENSMUST00000187758 Taf7Q9R1C0 341 aa9.45□□□□□ -0.9
Usp40-204ENSMUST00000187758 Kdm2bQ6P1G2 1309 aa9.44□□□□□ -0.9
Usp40-204ENSMUST00000187758 Kcnh4A2A5F7 1018 aa9.44□□□□□ -0.9
Usp40-204ENSMUST00000187758 Cnksr1A2A9K7 700 aa9.44□□□□□ -0.9
Usp40-204ENSMUST00000187758 Efcab2Q9CQ46 164 aa9.44□□□□□ -0.9
Usp40-204ENSMUST00000187758 Ccdc129Q14B48 1034 aa9.44□□□□□ -0.9
Usp40-204ENSMUST00000187758 Cluap1Q8R3P7 413 aa9.44□□□□□ -0.9
Usp40-204ENSMUST00000187758 Ccnl1Q52KE7 532 aaKnown RBP9.43□□□□□ -0.9
Usp40-204ENSMUST00000187758 Tmem119Q8R138 280 aa9.43□□□□□ -0.9
Usp40-204ENSMUST00000187758 Ccdc9Q8VC31 543 aaKnown RBP9.43□□□□□ -0.9
Usp40-204ENSMUST00000187758 Eno4Q8C042 619 aa9.43□□□□□ -0.9
Usp40-204ENSMUST00000187758 Chmp5Q9D7S9 219 aa9.43□□□□□ -0.9
Usp40-204ENSMUST00000187758 Nyap1Q6PFX7 833 aa9.42□□□□□ -0.9
Usp40-204ENSMUST00000187758 Ankrd23Q812A3 306 aa9.42□□□□□ -0.9
Usp40-204ENSMUST00000187758 Flad1Q8R123 492 aa9.42□□□□□ -0.9
Usp40-204ENSMUST00000187758 Akap11E9Q777 1895 aa9.42□□□□□ -0.9
Usp40-204ENSMUST00000187758 Ddb1Q3U1J4 1140 aaKnown RBP9.42□□□□□ -0.9
Usp40-204ENSMUST00000187758 CoilQ5SU73 570 aa9.42□□□□□ -0.9
Usp40-204ENSMUST00000187758 B4galnt3Q6L8S8 986 aa9.42□□□□□ -0.9
Usp40-204ENSMUST00000187758 Dbr1Q923B1 550 aa9.42□□□□□ -0.9
Usp40-204ENSMUST00000187758 Echdc1Q9D9V3 322 aa9.42□□□□□ -0.9
Usp40-204ENSMUST00000187758 AceP09470 1312 aa9.42□□□□□ -0.9
Usp40-204ENSMUST00000187758 InhbeO08717 350 aa9.41□□□□□ -0.9
Usp40-204ENSMUST00000187758 Iqsec3Q3TES0 1195 aa9.41□□□□□ -0.9
Usp40-204ENSMUST00000187758 Smg7Q5RJH6 1138 aaKnown RBP9.41□□□□□ -0.9
Usp40-204ENSMUST00000187758 HnrnpuQ8VEK3 800 aaKnown RBP9.41□□□□□ -0.9
Usp40-204ENSMUST00000187758 Mst1rQ62190 1378 aa9.41□□□□□ -0.9
Usp40-204ENSMUST00000187758 Nolc1E9Q5C9 702 aaKnown RBP9.41□□□□□ -0.9
Usp40-204ENSMUST00000187758 SympkQ80X82 1284 aa9.41□□□□□ -0.9
Usp40-204ENSMUST00000187758 Aldh1l2Q8K009 923 aa9.41□□□□□ -0.9
Usp40-204ENSMUST00000187758 Disp3A3KFU9 1347 aa9.41□□□□□ -0.9
Usp40-204ENSMUST00000187758 Sema6bO54951 886 aa9.41□□□□□ -0.9
Usp40-204ENSMUST00000187758 Smc5Q8CG46 1101 aaKnown RBP9.41□□□□□ -0.9
Usp40-204ENSMUST00000187758 Ints5Q8CHT3 1018 aa9.41□□□□□ -0.9
Usp40-204ENSMUST00000187758 Triml2E9PW10 424 aa9.4□□□□□ -0.9
Usp40-204ENSMUST00000187758 EspnQ9ET47 871 aa9.4□□□□□ -0.9
Usp40-204ENSMUST00000187758 Rlbp1Q9Z275 317 aa9.4□□□□□ -0.9
Usp40-204ENSMUST00000187758 Dlg5E9Q9R9 1921 aa9.4□□□□□ -0.9
Usp40-204ENSMUST00000187758 Prkab2Q6PAM0 271 aa9.4□□□□□ -0.9
Usp40-204ENSMUST00000187758 PigbQ9JJQ0 542 aa9.4□□□□□ -0.9
Usp40-204ENSMUST00000187758 Vps33bP59016 617 aa9.39□□□□□ -0.91
Usp40-204ENSMUST00000187758 Exoc6bA6H5Z3 810 aa9.39□□□□□ -0.91
Usp40-204ENSMUST00000187758 Irf9Q61179 399 aa9.39□□□□□ -0.91
Usp40-204ENSMUST00000187758 Morc2aQ69ZX6 1030 aa9.39□□□□□ -0.91
Usp40-204ENSMUST00000187758 Atl3Q91YH5 541 aa9.39□□□□□ -0.91
Usp40-204ENSMUST00000187758 Pnpla7A2AJ88 1352 aa9.39□□□□□ -0.91
Usp40-204ENSMUST00000187758 MypopQ8R4U1 393 aa9.39□□□□□ -0.91
Usp40-204ENSMUST00000187758 Prkar2bP31324 416 aa9.39□□□□□ -0.91
Usp40-204ENSMUST00000187758 Mphosph10Q810V0 681 aaKnown RBP9.39□□□□□ -0.91
Usp40-204ENSMUST00000187758 Hs1bp3Q3TC93 395 aa9.38□□□□□ -0.91
Usp40-204ENSMUST00000187758 Ubr2Q6WKZ8 1755 aa9.38□□□□□ -0.91
Usp40-204ENSMUST00000187758 Shank2Q80Z38 1476 aa9.38□□□□□ -0.91
Usp40-204ENSMUST00000187758 Crb1Q8VHS2 1405 aa9.38□□□□□ -0.91
Usp40-204ENSMUST00000187758 Cntnap1O54991 1385 aa9.38□□□□□ -0.91
Usp40-204ENSMUST00000187758 Gnai2P08752 355 aaKnown RBP9.38□□□□□ -0.91
Usp40-204ENSMUST00000187758 Jmjd4Q8BFT6 427 aa9.38□□□□□ -0.91
Usp40-204ENSMUST00000187758 Pdia6Q922R8 440 aaKnown RBP9.38□□□□□ -0.91
Usp40-204ENSMUST00000187758 Cfdp1O88271 295 aaKnown RBP9.37□□□□□ -0.91
Usp40-204ENSMUST00000187758 Cers3Q1A3B0 383 aa9.37□□□□□ -0.91
Usp40-204ENSMUST00000187758 Map3k2Q61083 619 aa9.37□□□□□ -0.91
Usp40-204ENSMUST00000187758 Hdac6Q9Z2V5 1149 aa9.37□□□□□ -0.91
Usp40-204ENSMUST00000187758 Cyp2d11P24457 504 aa9.37□□□□□ -0.91
Usp40-204ENSMUST00000187758 Sgsm1Q8BPQ7 1093 aa9.37□□□□□ -0.91
Usp40-204ENSMUST00000187758 Slc39a6Q8C145 765 aa9.37□□□□□ -0.91
Usp40-204ENSMUST00000187758 Sart3Q9JLI8 962 aaKnown RBP9.37□□□□□ -0.91
Usp40-204ENSMUST00000187758 AU019823E9PUQ3 292 aa9.36□□□□□ -0.91
Usp40-204ENSMUST00000187758 Kat6bQ8BRB7 1872 aa9.36□□□□□ -0.91
Usp40-204ENSMUST00000187758 Dmrt2Q8BG36 561 aa9.36□□□□□ -0.91
Usp40-204ENSMUST00000187758 Cap2Q9CYT6 476 aa9.36□□□□□ -0.91
Usp40-204ENSMUST00000187758 Flt4P35917 1363 aa9.36□□□□□ -0.91
Usp40-204ENSMUST00000187758 SkilQ60665 675 aa9.36□□□□□ -0.91
Usp40-204ENSMUST00000187758 Ankle2Q6P1H6 964 aa9.36□□□□□ -0.91
Usp40-204ENSMUST00000187758 Zap70P43404 618 aa9.35□□□□□ -0.91
Usp40-204ENSMUST00000187758 Atg3Q9CPX6 314 aa9.35□□□□□ -0.91
Usp40-204ENSMUST00000187758 Nwd2Q6P5U7 1742 aa9.35□□□□□ -0.91
Usp40-204ENSMUST00000187758 Pde4dQ01063 747 aa9.35□□□□□ -0.91
Usp40-204ENSMUST00000187758 Klc3Q91W40 508 aa9.35□□□□□ -0.91
Usp40-204ENSMUST00000187758 Eif3aP23116 1344 aaKnown RBP9.35□□□□□ -0.91
Usp40-204ENSMUST00000187758 Erbb4Q61527 1308 aa9.35□□□□□ -0.91
Usp40-204ENSMUST00000187758 Cacna1sQ02789 1880 aa9.35□□□□□ -0.91
Usp40-204ENSMUST00000187758 4933416C03RikQ3V063 378 aa9.35□□□□□ -0.91
Usp40-204ENSMUST00000187758 Bicc1Q99MQ1 977 aaKnown RBP9.35□□□□□ -0.91
Usp40-204ENSMUST00000187758 Adcy9P51830 1353 aa9.35□□□□□ -0.91
Usp40-204ENSMUST00000187758 Tm6sf1P58749 370 aa9.34□□□□□ -0.91
Usp40-204ENSMUST00000187758 Wwc1Q5SXA9 1104 aa9.34□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 36.8 ms