RNA–Protein interactions for RNA: ENSMUST00000173347.7

Lig3-210, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-210ENSMUST00000173347 Cc2d1aQ8K1A6 943 aa13.54□□□□□ -0.24
Lig3-210ENSMUST00000173347 CarsQ9ER72 831 aaKnown RBP13.54□□□□□ -0.24
Lig3-210ENSMUST00000173347 Hsp90ab1P11499 724 aaKnown RBP13.53□□□□□ -0.24
Lig3-210ENSMUST00000173347 Fkbp4P30416 458 aa13.53□□□□□ -0.24
Lig3-210ENSMUST00000173347 Disp3A3KFU9 1347 aa13.53□□□□□ -0.24
Lig3-210ENSMUST00000173347 Ppm1gQ61074 542 aa13.53□□□□□ -0.24
Lig3-210ENSMUST00000173347 Dlg5E9Q9R9 1921 aa13.53□□□□□ -0.24
Lig3-210ENSMUST00000173347 CoilQ5SU73 570 aa13.53□□□□□ -0.24
Lig3-210ENSMUST00000173347 Arhgef1Q61210 920 aaKnown RBP13.53□□□□□ -0.24
Lig3-210ENSMUST00000173347 Ccdc155Q80VJ8 648 aa13.53□□□□□ -0.24
Lig3-210ENSMUST00000173347 Acsbg1Q99PU5 721 aa13.53□□□□□ -0.24
Lig3-210ENSMUST00000173347 Tmc1Q8R4P5 757 aa13.52□□□□□ -0.24
Lig3-210ENSMUST00000173347 Pnpla7A2AJ88 1352 aa13.52□□□□□ -0.24
Lig3-210ENSMUST00000173347 Eif3bQ8JZQ9 803 aaKnown RBP13.52□□□□□ -0.25
Lig3-210ENSMUST00000173347 Cdhr2E9Q7P9 1308 aa13.52□□□□□ -0.25
Lig3-210ENSMUST00000173347 Pnmal2G3X9N3 661 aa13.52□□□□□ -0.25
Lig3-210ENSMUST00000173347 Gnai2P08752 355 aaKnown RBP13.52□□□□□ -0.25
Lig3-210ENSMUST00000173347 CanxP35564 591 aaKnown RBP13.52□□□□□ -0.25
Lig3-210ENSMUST00000173347 Nkx2-3P97334 362 aa13.52□□□□□ -0.25
Lig3-210ENSMUST00000173347 Fam13aQ8BGI4 693 aa13.52□□□□□ -0.25
Lig3-210ENSMUST00000173347 Ccdc27Q3V036 639 aa13.51□□□□□ -0.25
Lig3-210ENSMUST00000173347 FocadA2AKG8 1798 aa13.51□□□□□ -0.25
Lig3-210ENSMUST00000173347 Tns2Q8CGB6 1400 aa13.51□□□□□ -0.25
Lig3-210ENSMUST00000173347 GckrQ91X44 587 aa13.51□□□□□ -0.25
Lig3-210ENSMUST00000173347 Echdc1Q9D9V3 322 aa13.51□□□□□ -0.25
Lig3-210ENSMUST00000173347 Speer4bQ9D9F7 267 aa13.5□□□□□ -0.25
Lig3-210ENSMUST00000173347 ChgaP26339 463 aaKnown RBP13.5□□□□□ -0.25
Lig3-210ENSMUST00000173347 Slx1bQ8BX32 270 aa13.5□□□□□ -0.25
Lig3-210ENSMUST00000173347 Tmem119Q8R138 280 aa13.5□□□□□ -0.25
Lig3-210ENSMUST00000173347 Sart3Q9JLI8 962 aaKnown RBP13.5□□□□□ -0.25
Lig3-210ENSMUST00000173347 Aldh8a1Q8BH00 487 aa13.49□□□□□ -0.25
Lig3-210ENSMUST00000173347 Gimap5Q8BWF2 308 aa13.49□□□□□ -0.25
Lig3-210ENSMUST00000173347 Gcc1Q9D4H2 778 aa13.49□□□□□ -0.25
Lig3-210ENSMUST00000173347 Bcl2l13P59017 434 aa13.49□□□□□ -0.25
Lig3-210ENSMUST00000173347 Cog6Q8R3I3 657 aa13.49□□□□□ -0.25
Lig3-210ENSMUST00000173347 Taf7Q9R1C0 341 aa13.49□□□□□ -0.25
Lig3-210ENSMUST00000173347 ScaperF8VQ70 1398 aaKnown RBP13.48□□□□□ -0.25
Lig3-210ENSMUST00000173347 Asic4Q7TNS7 539 aa13.48□□□□□ -0.25
Lig3-210ENSMUST00000173347 Dnai1Q8C0M8 701 aa13.48□□□□□ -0.25
Lig3-210ENSMUST00000173347 Tnks1bp1P58871 1720 aa13.48□□□□□ -0.25
Lig3-210ENSMUST00000173347 Mcm2P97310 904 aa13.48□□□□□ -0.25
Lig3-210ENSMUST00000173347 Ssfa2Q922B9 1252 aa13.48□□□□□ -0.25
Lig3-210ENSMUST00000173347 Stk36Q69ZM6 1316 aa13.48□□□□□ -0.25
Lig3-210ENSMUST00000173347 TefQ9JLC6 301 aa13.47□□□□□ -0.25
Lig3-210ENSMUST00000173347 Gm21663A0A0G2JE01 267 aa13.47□□□□□ -0.25
Lig3-210ENSMUST00000173347 Gm7361D3Z6R1 267 aa13.47□□□□□ -0.25
Lig3-210ENSMUST00000173347 5031410I06RikE9Q4E0 267 aa13.47□□□□□ -0.25
Lig3-210ENSMUST00000173347 Ccdc146E9Q9F7 977 aa13.47□□□□□ -0.25
Lig3-210ENSMUST00000173347 Gm1979E9QAN3 267 aa13.47□□□□□ -0.25
Lig3-210ENSMUST00000173347 Gm5862K7N5V5 267 aa13.47□□□□□ -0.25
Lig3-210ENSMUST00000173347 Gm10220K7N660 267 aa13.47□□□□□ -0.25
Lig3-210ENSMUST00000173347 Slc5a1Q8C3K6 665 aa13.47□□□□□ -0.25
Lig3-210ENSMUST00000173347 Zfp142G5E869 1843 aa13.47□□□□□ -0.25
Lig3-210ENSMUST00000173347 Cyp2d11P24457 504 aa13.46□□□□□ -0.25
Lig3-210ENSMUST00000173347 Atg3Q9CPX6 314 aa13.46□□□□□ -0.25
Lig3-210ENSMUST00000173347 Gm21680A0A0G2JGR8 267 aa13.46□□□□□ -0.25
Lig3-210ENSMUST00000173347 Wdr63B2RY71 923 aa13.46□□□□□ -0.25
Lig3-210ENSMUST00000173347 Srgap3Q812A2 1099 aa13.46□□□□□ -0.26
Lig3-210ENSMUST00000173347 FanclQ9CR14 375 aa13.46□□□□□ -0.26
Lig3-210ENSMUST00000173347 Nkx1-2P42580 305 aa13.45□□□□□ -0.26
Lig3-210ENSMUST00000173347 Exoc6bA6H5Z3 810 aa13.45□□□□□ -0.26
Lig3-210ENSMUST00000173347 Mfap1aC0HKD8 439 aaKnown RBP13.45□□□□□ -0.26
Lig3-210ENSMUST00000173347 Mfap1bC0HKD9 439 aaKnown RBP13.45□□□□□ -0.26
Lig3-210ENSMUST00000173347 SympkQ80X82 1284 aa13.45□□□□□ -0.26
Lig3-210ENSMUST00000173347 BcorQ8CGN4 1759 aa13.45□□□□□ -0.26
Lig3-210ENSMUST00000173347 Tbc1d32Q3URV1 1296 aa13.45□□□□□ -0.26
Lig3-210ENSMUST00000173347 Ppp1r42Q8R1Z4 357 aa13.45□□□□□ -0.26
Lig3-210ENSMUST00000173347 Cnnm1Q0GA42 951 aa13.44□□□□□ -0.26
Lig3-210ENSMUST00000173347 Mphosph10Q810V0 681 aaKnown RBP13.44□□□□□ -0.26
Lig3-210ENSMUST00000173347 Eif2s2Q99L45 331 aaKnown RBP13.44□□□□□ -0.26
Lig3-210ENSMUST00000173347 Nphp1Q9QY53 687 aa13.44□□□□□ -0.26
Lig3-210ENSMUST00000173347 Cfdp1O88271 295 aaKnown RBP13.44□□□□□ -0.26
Lig3-210ENSMUST00000173347 Iqsec3Q3TES0 1195 aa13.44□□□□□ -0.26
Lig3-210ENSMUST00000173347 Morc2aQ69ZX6 1030 aa13.44□□□□□ -0.26
Lig3-210ENSMUST00000173347 Atp8b2P98199 1209 aa13.43□□□□□ -0.26
Lig3-210ENSMUST00000173347 Irf9Q61179 399 aa13.43□□□□□ -0.26
Lig3-210ENSMUST00000173347 Larp1Q6ZQ58 1072 aaKnown RBP13.43□□□□□ -0.26
Lig3-210ENSMUST00000173347 Smim5Q8BT42 78 aa13.43□□□□□ -0.26
Lig3-210ENSMUST00000173347 Pard3Q99NH2 1333 aa13.43□□□□□ -0.26
Lig3-210ENSMUST00000173347 Cwc27Q3TKY6 469 aa13.43□□□□□ -0.26
Lig3-210ENSMUST00000173347 Zap70P43404 618 aa13.43□□□□□ -0.26
Lig3-210ENSMUST00000173347 Map3k2Q61083 619 aa13.43□□□□□ -0.26
Lig3-210ENSMUST00000173347 Bend3Q6PAL0 825 aa13.43□□□□□ -0.26
Lig3-210ENSMUST00000173347 Zeb2Q9R0G7 1215 aa13.43□□□□□ -0.26
Lig3-210ENSMUST00000173347 Ddx54Q8K4L0 874 aaKnown RBP13.42□□□□□ -0.26
Lig3-210ENSMUST00000173347 Smarca5Q91ZW3 1051 aaKnown RBP13.42□□□□□ -0.26
Lig3-210ENSMUST00000173347 Flt4P35917 1363 aa13.42□□□□□ -0.26
Lig3-210ENSMUST00000173347 Eif3aP23116 1344 aaKnown RBP13.42□□□□□ -0.26
Lig3-210ENSMUST00000173347 Adcy9P51830 1353 aa13.42□□□□□ -0.26
Lig3-210ENSMUST00000173347 Bcl11bQ99PV8 884 aa13.41□□□□□ -0.26
Lig3-210ENSMUST00000173347 Cyp46a1Q9WVK8 500 aa13.41□□□□□ -0.26
Lig3-210ENSMUST00000173347 Ubr2Q6WKZ8 1755 aa13.41□□□□□ -0.26
Lig3-210ENSMUST00000173347 Rabep1O35551 862 aa13.41□□□□□ -0.26
Lig3-210ENSMUST00000173347 Mmp8O70138 465 aa13.41□□□□□ -0.26
Lig3-210ENSMUST00000173347 Efcab2Q9CQ46 164 aa13.41□□□□□ -0.26
Lig3-210ENSMUST00000173347 Atg4a-psA0A0G2JFS9 396 aa13.4□□□□□ -0.26
Lig3-210ENSMUST00000173347 Atg4aQ8C9S8 396 aa13.4□□□□□ -0.26
Lig3-210ENSMUST00000173347 Pdia6Q922R8 440 aaKnown RBP13.4□□□□□ -0.26
Lig3-210ENSMUST00000173347 Marf1Q8BJ34 1730 aaKnown RBP13.4□□□□□ -0.26
Lig3-210ENSMUST00000173347 Flad1Q8R123 492 aa13.4□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms