RNA–Protein interactions for RNA: ENSMUST00000165860.7

Ubr4-212, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

TSL 5 BASIC

Gene Ubr4, Length 15,798 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-212ENSMUST00000165860 Swt1Q9DBQ9 907 aa7.09□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Mink1Q9JM52 1308 aa7.09□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Gnai1B2RSH2 354 aa7.09□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Snx13Q6PHS6 957 aa7.09□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Gnai3Q9DC51 354 aa7.09□□□□□ -1.27
Ubr4-212ENSMUST00000165860 Vil1Q62468 827 aa7.09□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Pnpla2Q8BJ56 486 aa7.09□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Hs1bp3Q3TC93 395 aa7.08□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Als2cr12Q8BVM7 383 aa7.08□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Spats2lQ91WJ7 558 aaKnown RBP7.08□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Dtnbp1Q91WZ8 352 aa7.08□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Il16O54824 1322 aa7.08□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Pet2A2AHY8 747 aa7.08□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Igsf3Q6ZQA6 1194 aa7.08□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Usp40Q8BWR4 1235 aa7.08□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Wwc1Q5SXA9 1104 aa7.08□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Phldb1Q6PDH0 1371 aaKnown RBP7.08□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Plekhh2Q8C115 1491 aa7.08□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Q4VA45 678 aa7.08□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Mum1l1Q4VA55 681 aa7.08□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Kiaa1328Q6NZK5 612 aa7.08□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Rab11fip3Q8CHD8 1047 aa7.08□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Slc20a2Q80UP8 656 aa7.08□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Necab1Q8BG18 352 aa7.08□□□□□ -1.28
Ubr4-212ENSMUST00000165860 LzicQ8K3C3 190 aa7.08□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Vps37cQ8R105 352 aa7.08□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Zfp644E9QA22 1323 aa7.08□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Tnip1Q9WUU8 647 aa7.08□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Sox12Q04890 314 aa7.08□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Tmx1Q8VBT0 278 aa7.08□□□□□ -1.28
Ubr4-212ENSMUST00000165860 PhaxQ9JJT9 385 aaKnown RBP7.08□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Plcb3P51432 1234 aaKnown RBP7.08□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Specc1lQ2KN98 1118 aaKnown RBP7.08□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Rassf10Q8BL43 508 aa7.08□□□□□ -1.28
Ubr4-212ENSMUST00000165860 ZfxP17012 799 aa7.07□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Gadd45bP22339 160 aa7.07□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Kif5bQ61768 963 aa7.07□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Spata24Q6P926 205 aa7.07□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Gbp6A0A0G2JDV3 611 aa7.07□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Gm43302L7N1X8 611 aa7.07□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Ddx49Q4FZF3 480 aaKnown RBP7.07□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Cep57l1Q8VDS7 400 aa7.07□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Ccdc6D3YZP9 469 aa7.07□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Fam76aQ922G2 307 aa7.07□□□□□ -1.28
Ubr4-212ENSMUST00000165860 AatfQ9JKX4 526 aaKnown RBP7.07□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Cdr1E9Q0B4 517 aa7.07□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Ppp6r1Q7TSI3 856 aa7.07□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Btn2a2A4QPC6 514 aa7.07□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Naa25Q8BWZ3 972 aa7.07□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Kif5cP28738 956 aaKnown RBP7.07□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Trim17Q7TPM3 477 aa7.07□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Pof1bQ8K4L4 587 aa7.07□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Oas2E9Q9A9 742 aa7.07□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Rab3il1Q8VDV3 383 aa7.07□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Abcf1Q6P542 837 aaKnown RBP7.07□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Dhx57Q6P5D3 1388 aaKnown RBP7.07□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Aimp1P31230 310 aaKnown RBP7.07□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Nucb1Q02819 459 aaKnown RBP7.06□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Gng11P61953 73 aa7.06□□□□□ -1.28
Ubr4-212ENSMUST00000165860 KdrP35918 1367 aa7.06□□□□□ -1.28
Ubr4-212ENSMUST00000165860 MafgO54790 162 aa7.06□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Frat1P70339 274 aa7.06□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Duxf3A0A0N4SV92 674 aa7.06□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Gm10471E9Q1C7 252 aa7.06□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Gbp2Q9Z0E6 589 aa7.06□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Ddx19aQ61655 478 aaKnown RBP7.06□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Rimbp2Q80U40 1072 aa7.06□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Stx6Q9JKK1 255 aa7.06□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Abcd1P48410 736 aa7.06□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Shtn1Q8K2Q9 631 aa7.06□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Gbp1Q01514 589 aa7.06□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Tbc1d31Q6NXY1 996 aa7.06□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Myo6Q64331 1265 aa7.05□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Igbp1bQ9QZ29 343 aa7.05□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Ano6Q6P9J9 911 aa7.05□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Adck5Q80V03 582 aa7.05□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Ccdc158Q8CDI6 1109 aa7.05□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Ddx27Q921N6 760 aaKnown RBP7.05□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Syt10Q9R0N4 523 aa7.05□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Brd1E9PZ26 1189 aaKnown RBP7.05□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Pafah1b1P63005 410 aaKnown RBP7.05□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Swap70Q6A028 585 aaKnown RBP7.05□□□□□ -1.28
Ubr4-212ENSMUST00000165860 SltmQ8CH25 1031 aaKnown RBP7.05□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Erich5Q8K0S2 362 aa7.05□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Tubb6Q922F4 447 aa7.05□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Styxl1Q9DAR2 321 aa7.05□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Cux2P70298 1426 aa7.05□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Ncoa1P70365 1447 aa7.05□□□□□ -1.28
Ubr4-212ENSMUST00000165860 VeztQ3ZK22 780 aa7.05□□□□□ -1.28
Ubr4-212ENSMUST00000165860 PawrQ925B0 333 aa7.05□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Mrpl40Q9Z2Q5 206 aa7.05□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Gm21671G3UY31 267 aa7.05□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Trak2Q6P9N8 913 aa7.05□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Iffo1Q8BXL9 562 aa7.05□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Gm44G3UW88 330 aa7.05□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Nphp1Q9QY53 687 aa7.05□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Cavin4A2AMM0 362 aa7.05□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Ccdc66Q6NS45 935 aa7.05□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Zscan25B2RX31 543 aa7.04□□□□□ -1.28
Ubr4-212ENSMUST00000165860 Prpf4bQ61136 1007 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 55.7 ms