RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Txndc16Q7TN22 820 aa10.77□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Armc9Q9D2I5 817 aa10.77□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Akap8Q9DBR0 687 aaKnown RBP10.77□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Ces1hD3Z298 562 aa10.77□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Akap2O54931 893 aa10.77□□□□□ -0.69
Col6a5-201ENSMUST00000165165 CebpzP53569 1052 aaKnown RBP10.77□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Speer4f2E9Q366 295 aa10.77□□□□□ -0.69
Col6a5-201ENSMUST00000165165 E9QMW4 1145 aa10.77□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Gas2l3Q3UWW6 683 aa10.77□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Brms1Q99N20 246 aa10.77□□□□□ -0.69
Col6a5-201ENSMUST00000165165 CactinQ9CS00 772 aaKnown RBP10.77□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Cux1P53564 1515 aa10.77□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Atp2b1G5E829 1220 aa10.77□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Naa25Q8BWZ3 972 aa10.77□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Cnnm1Q0GA42 951 aa10.77□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Fam184bQ0KK56 942 aa10.77□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Sirt1Q923E4 737 aa10.77□□□□□ -0.69
Col6a5-201ENSMUST00000165165 ZwintQ9CQU5 252 aa10.77□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Sept14Q9DA97 430 aa10.77□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Cavin1O54724 392 aa10.76□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Sf3b2Q3UJB0 878 aaKnown RBP10.76□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Kif5bQ61768 963 aa10.76□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Mapk8ip1Q9WVI9 707 aa10.76□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Gjc1P28229 396 aa10.76□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Hvcn1Q3U2S8 269 aa10.76□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Ssh1Q76I79 1042 aa10.76□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Gsto1O09131 240 aa10.76□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Rhot2Q8JZN7 620 aa10.76□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Trim34bJ3QNR8 485 aa10.76□□□□□ -0.69
Col6a5-201ENSMUST00000165165 FerP70451 823 aa10.76□□□□□ -0.69
Col6a5-201ENSMUST00000165165 DmtnQ9WV69 405 aa10.76□□□□□ -0.69
Col6a5-201ENSMUST00000165165 IkbkgO88522 412 aa10.76□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Cpa2Q504N0 417 aa10.76□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Vps36Q91XD6 386 aa10.76□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Cep135Q6P5D4 1140 aa10.76□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Ppp6r1Q7TSI3 856 aa10.76□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Snw1Q9CSN1 536 aaKnown RBP10.76□□□□□ -0.69
Col6a5-201ENSMUST00000165165 DonsonQ9QXP4 560 aa10.75□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Trerf1Q8BXJ2 1205 aa10.75□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Ccdc38Q8CDN8 563 aa10.75□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Gucy1a3Q9ERL9 691 aa10.75□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Gsdma2Q32M21 443 aa10.75□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Sycp2Q9CUU3 1500 aa10.75□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Ca8P28651 291 aa10.75□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Cfap69Q8BH53 942 aa10.75□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Bicd1Q8BR07 835 aa10.75□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Cep19Q9CQA8 163 aa10.75□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Prpf40aQ9R1C7 953 aaKnown RBP10.75□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Stmn4P63042 189 aa10.75□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Suds3Q8BR65 328 aa10.75□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Mroh7A2AVR2 1279 aa10.74□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Srgap3Q812A2 1099 aa10.74□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Ripk4Q9ERK0 786 aa10.74□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Dapk1Q80YE7 1442 aa10.74□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Ccdc170D3YXL0 722 aa10.74□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Rasal2E9PW37 1286 aa10.74□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Fermt1P59113 677 aa10.74□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Cwc27Q3TKY6 469 aa10.74□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Rsrc1Q9DBU6 334 aa10.74□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Ehbp1Q69ZW3 1231 aa10.74□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Psmd6Q99JI4 389 aa10.74□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Trim11Q99PQ2 467 aa10.74□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Polr1aO35134 1717 aaKnown RBP10.73□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Tmc2Q8R4P4 888 aa10.73□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Stard3nlQ9DCI3 235 aa10.73□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Synj1Q8CHC4 1574 aa10.73□□□□□ -0.69
Col6a5-201ENSMUST00000165165 NmiO35309 314 aa10.73□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Cep63Q3UPP8 700 aa10.73□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Morc4Q8BMD7 928 aa10.73□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Tex13c2A0A0G2JGA3 530 aa10.73□□□□□ -0.69
Col6a5-201ENSMUST00000165165 PnisrA2AJT4 805 aaKnown RBP10.73□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Zscan10Q3URR7 782 aa10.72□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Atf3Q60765 181 aa10.72□□□□□ -0.69
Col6a5-201ENSMUST00000165165 IqceQ6PCQ0 778 aa10.72□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Q9D5Q8 446 aa10.72□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Lrsam1Q80ZI6 727 aa10.72□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Ift74Q8BKE9 600 aa10.72□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Taok3Q8BYC6 898 aa10.72□□□□□ -0.69
Col6a5-201ENSMUST00000165165 RpgrQ9R0X5 1001 aa10.72□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Ankrd36D3Z4K0 1415 aa10.72□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Irgm2A0A140LIF8 407 aa10.72□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Riok1Q922Q2 567 aa10.72□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Rapgef2Q8CHG7 1496 aa10.72□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Ttc19Q8CC21 365 aa10.72□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Mcm6P97311 821 aa10.71□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Cog6Q8R3I3 657 aa10.71□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Aimp1P31230 310 aaKnown RBP10.71□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Cep55Q8BT07 462 aa10.71□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Clip2Q9Z0H8 1047 aa10.71□□□□□ -0.69
Col6a5-201ENSMUST00000165165 SfpqQ8VIJ6 699 aaKnown RBP10.71□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Kif18aQ91WD7 886 aa10.71□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Tpd52l2Q9CYZ2 220 aaKnown RBP10.71□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Cul5Q9D5V5 780 aa10.71□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Sptbn5F6UCX4 1208 aa10.71□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Ano2Q8CFW1 1002 aa10.71□□□□□ -0.69
Col6a5-201ENSMUST00000165165 Ktn1Q61595 1327 aaKnown RBP10.71□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Ccdc186Q8C9S4 917 aa10.71□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Cib2Q9Z309 187 aa10.71□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Stmn2P55821 179 aa10.71□□□□□ -0.7
Col6a5-201ENSMUST00000165165 Ddx24Q9ESV0 857 aaKnown RBP10.71□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 74 ms