RNA–Protein interactions for RNA: ENSMUST00000111438.1

Ddx55-202, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

TSL 2 BASIC

Gene Ddx55, Length 2,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-202ENSMUST00000111438 Atf5O70191 283 aa15.7■□□□□ 0.1
Ddx55-202ENSMUST00000111438 Ccdc60Q8C4J0 545 aa15.69■□□□□ 0.1
Ddx55-202ENSMUST00000111438 KarsQ99MN1 595 aaKnown RBP15.69■□□□□ 0.1
Ddx55-202ENSMUST00000111438 Trim26Q99PN3 545 aa15.69■□□□□ 0.1
Ddx55-202ENSMUST00000111438 Rwdd1Q9CQK7 243 aa15.69■□□□□ 0.1
Ddx55-202ENSMUST00000111438 4930523C07RikE9Q2T4 99 aa15.68■□□□□ 0.1
Ddx55-202ENSMUST00000111438 Pibf1E9Q6K3 756 aa15.68■□□□□ 0.1
Ddx55-202ENSMUST00000111438 Wdr43Q6ZQL4 677 aaKnown RBP15.68■□□□□ 0.1
Ddx55-202ENSMUST00000111438 Cavin2Q63918 418 aaKnown RBP15.67■□□□□ 0.1
Ddx55-202ENSMUST00000111438 Chpf2Q3UU43 768 aa15.67■□□□□ 0.1
Ddx55-202ENSMUST00000111438 Ccnl1Q52KE7 532 aaKnown RBP15.67■□□□□ 0.1
Ddx55-202ENSMUST00000111438 Polr3glQ8R0C0 218 aa15.67■□□□□ 0.1
Ddx55-202ENSMUST00000111438 ApobrQ8VBT6 942 aa15.67■□□□□ 0.1
Ddx55-202ENSMUST00000111438 Nsd3Q6P2L6 1439 aa15.67■□□□□ 0.1
Ddx55-202ENSMUST00000111438 1700019A02RikA0A087WPV9 146 aa15.67■□□□□ 0.1
Ddx55-202ENSMUST00000111438 Chl1P70232 1209 aa15.66■□□□□ 0.1
Ddx55-202ENSMUST00000111438 Ccdc27Q3V036 639 aa15.66■□□□□ 0.1
Ddx55-202ENSMUST00000111438 Pknox2Q8BG99 474 aa15.66■□□□□ 0.1
Ddx55-202ENSMUST00000111438 AceP09470 1312 aa15.66■□□□□ 0.1
Ddx55-202ENSMUST00000111438 GakQ99KY4 1305 aa15.66■□□□□ 0.1
Ddx55-202ENSMUST00000111438 Kndc1Q0KK55 1742 aa15.66■□□□□ 0.1
Ddx55-202ENSMUST00000111438 G3bp1P97855 465 aaKnown RBP15.66■□□□□ 0.1
Ddx55-202ENSMUST00000111438 Taok3Q8BYC6 898 aa15.66■□□□□ 0.1
Ddx55-202ENSMUST00000111438 Gm6268A2A3U9 297 aa15.65■□□□□ 0.1
Ddx55-202ENSMUST00000111438 Plekhm2Q80TQ5 1018 aa15.65■□□□□ 0.1
Ddx55-202ENSMUST00000111438 Iqsec3Q3TES0 1195 aa15.64■□□□□ 0.09
Ddx55-202ENSMUST00000111438 Q3TQI7 289 aaKnown RBP15.64■□□□□ 0.09
Ddx55-202ENSMUST00000111438 Efcab2Q9CQ46 164 aa15.64■□□□□ 0.09
Ddx55-202ENSMUST00000111438 Nav1Q8CH77 1875 aa15.63■□□□□ 0.09
Ddx55-202ENSMUST00000111438 Pnpla7A2AJ88 1352 aa15.63■□□□□ 0.09
Ddx55-202ENSMUST00000111438 Tmem119Q8R138 280 aa15.63■□□□□ 0.09
Ddx55-202ENSMUST00000111438 Hdac6Q9Z2V5 1149 aa15.63■□□□□ 0.09
Ddx55-202ENSMUST00000111438 MarsQ68FL6 902 aaKnown RBP15.62■□□□□ 0.09
Ddx55-202ENSMUST00000111438 Liat1Q810M6 228 aa15.62■□□□□ 0.09
Ddx55-202ENSMUST00000111438 Pdia6Q922R8 440 aaKnown RBP15.62■□□□□ 0.09
Ddx55-202ENSMUST00000111438 Fbln2P37889 1221 aa15.61■□□□□ 0.09
Ddx55-202ENSMUST00000111438 GckrQ91X44 587 aa15.61■□□□□ 0.09
Ddx55-202ENSMUST00000111438 Taf7Q9R1C0 341 aa15.61■□□□□ 0.09
Ddx55-202ENSMUST00000111438 Cnksr1A2A9K7 700 aa15.6■□□□□ 0.09
Ddx55-202ENSMUST00000111438 Atg3Q9CPX6 314 aa15.6■□□□□ 0.09
Ddx55-202ENSMUST00000111438 Apbb1Q9QXJ1 710 aa15.6■□□□□ 0.09
Ddx55-202ENSMUST00000111438 Irx3P81067 507 aa15.6■□□□□ 0.09
Ddx55-202ENSMUST00000111438 Egfem1Q8C088 590 aa15.6■□□□□ 0.09
Ddx55-202ENSMUST00000111438 PigbQ9JJQ0 542 aa15.6■□□□□ 0.09
Ddx55-202ENSMUST00000111438 Tnnt1O88346 262 aa15.59■□□□□ 0.09
Ddx55-202ENSMUST00000111438 TefQ9JLC6 301 aa15.59■□□□□ 0.09
Ddx55-202ENSMUST00000111438 Rps6ka4Q9Z2B9 773 aa15.59■□□□□ 0.09
Ddx55-202ENSMUST00000111438 Adcy9P51830 1353 aa15.59■□□□□ 0.09
Ddx55-202ENSMUST00000111438 Trim58Q5NCC9 485 aa15.59■□□□□ 0.09
Ddx55-202ENSMUST00000111438 Bsdc1Q80Y55 427 aa15.59■□□□□ 0.09
Ddx55-202ENSMUST00000111438 Zcrb1Q9CZ96 217 aaKnown RBP15.59■□□□□ 0.09
Ddx55-202ENSMUST00000111438 Cap2Q9CYT6 476 aa15.59■□□□□ 0.09
Ddx55-202ENSMUST00000111438 Irx6Q9ER75 438 aa15.59■□□□□ 0.09
Ddx55-202ENSMUST00000111438 Q3UPC7 1272 aa15.58■□□□□ 0.08
Ddx55-202ENSMUST00000111438 PsapQ61207 557 aaKnown RBP15.58■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Ppp6r1Q7TSI3 856 aa15.58■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Lrit1Q8K099 624 aa15.58■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Fkbp4P30416 458 aa15.58■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Nectin2P32507 530 aa15.58■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Col4a1P02463 1669 aa15.57■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Tmco5bQ80X59 307 aa15.57■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Col22a1E9Q7P1 1613 aa15.57■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Sos2Q02384 1333 aa15.57■□□□□ 0.08
Ddx55-202ENSMUST00000111438 CoilQ5SU73 570 aa15.57■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Ppfibp2O35711 882 aa15.56■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Morc2aQ69ZX6 1030 aa15.56■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Afg3l2Q8JZQ2 802 aaKnown RBP15.56■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Aldh1l1Q8R0Y6 902 aa15.56■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Ric1Q69ZJ7 1422 aa15.56■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Cnnm1Q0GA42 951 aa15.56■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Dcaf5Q80T85 946 aa15.56■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Sv2bQ8BG39 683 aa15.56■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Sipa1l3G3X9J0 1776 aa15.55■□□□□ 0.08
Ddx55-202ENSMUST00000111438 SympkQ80X82 1284 aa15.55■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Jmjd4Q8BFT6 427 aa15.55■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Pank1Q8K4K6 548 aa15.55■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Flad1Q8R123 492 aa15.55■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Mylk2Q8VCR8 613 aa15.55■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Fam83gQ5SWY7 812 aa15.55■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Smg7Q5RJH6 1138 aaKnown RBP15.54■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Prkab2Q6PAM0 271 aa15.54■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Znf521Q6KAS7 1311 aa15.54■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Klc3Q91W40 508 aa15.54■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Bcl2l13P59017 434 aa15.53■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Aplp1Q03157 653 aa15.53■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Cers3Q1A3B0 383 aa15.53■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Ppp1r3fQ9JIG4 799 aa15.53■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Arhgap33Q80YF9 1305 aa15.53■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Aifm3Q3TY86 605 aa15.53■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Cyp2d11P24457 504 aa15.52■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Rangap1P46061 589 aaKnown RBP15.52■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Flt4P35917 1363 aa15.52■□□□□ 0.08
Ddx55-202ENSMUST00000111438 Erbb4Q61527 1308 aa15.52■□□□□ 0.07
Ddx55-202ENSMUST00000111438 C4bP01029 1738 aa15.52■□□□□ 0.07
Ddx55-202ENSMUST00000111438 Ric3Q8BPM6 367 aa15.52■□□□□ 0.07
Ddx55-202ENSMUST00000111438 Mbd3Q9Z2D8 285 aaKnown RBP15.52■□□□□ 0.07
Ddx55-202ENSMUST00000111438 Disp3A3KFU9 1347 aa15.52■□□□□ 0.07
Ddx55-202ENSMUST00000111438 Kiaa0319Q5SZV5 1081 aa15.51■□□□□ 0.07
Ddx55-202ENSMUST00000111438 Maco1Q7TQE6 664 aaKnown RBP15.51■□□□□ 0.07
Ddx55-202ENSMUST00000111438 GalcP54818 684 aa15.5■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 58.3 ms