RNA–Protein interactions for RNA: ENSMUST00000111051.9

Bdnf-210, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,125 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-210ENSMUST00000111051 Atp8b2P98199 1209 aa10□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Rbm27Q5SFM8 1060 aaKnown RBP10□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Ccdc178Q8CDV0 866 aa10□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Cep57l1Q8VDS7 400 aa10□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Adgrl3Q80TS3 1537 aa9.99□□□□□ -0.81
Bdnf-210ENSMUST00000111051 TnmdQ9EP64 317 aa9.99□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Gdpd2Q9ESM6 539 aa9.99□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Stx6Q9JKK1 255 aa9.99□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Hook1Q8BIL5 728 aa9.99□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Chmp3Q9CQ10 224 aa9.99□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Gadd45bP22339 160 aa9.99□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Fkbp4P30416 458 aa9.99□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Q3UJC8 639 aa9.99□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Brf1Q8CFK2 676 aa9.99□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Tshz3Q8CGV9 1081 aa9.99□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Rhot2Q8JZN7 620 aa9.99□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Ube2q2Q8K2Z8 378 aa9.99□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Ripk4Q9ERK0 786 aa9.99□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Krt85Q9Z2T6 507 aa9.99□□□□□ -0.81
Bdnf-210ENSMUST00000111051 MyclP10166 368 aa9.98□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Nol10Q5RJG1 687 aaKnown RBP9.98□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Gpatch3Q8BIY1 525 aa9.98□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Gys2Q8VCB3 704 aa9.98□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Pmfbp1Q9WVQ0 1022 aa9.98□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Wdr33Q8K4P0 1330 aaKnown RBP9.98□□□□□ -0.81
Bdnf-210ENSMUST00000111051 AppP12023 770 aa9.98□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Adcy5P84309 1262 aa9.98□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Kiaa0753Q6A000 959 aa9.98□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Q8C5K5 320 aa9.98□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Mcmdc2E9Q956 681 aa9.98□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Dhx16G3X8X0 1044 aaKnown RBP9.98□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Fyb1O35601 819 aa9.98□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Neurod6P48986 337 aa9.98□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Chmp7Q8R1T1 451 aa9.98□□□□□ -0.81
Bdnf-210ENSMUST00000111051 RestQ8VIG1 1082 aa9.98□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Exoc6bA6H5Z3 810 aa9.97□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Fam83gQ5SWY7 812 aa9.97□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Atg4a-psA0A0G2JFS9 396 aa9.97□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Zhx1P70121 873 aa9.97□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Atg4aQ8C9S8 396 aa9.97□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Smc4Q8CG47 1286 aa9.97□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Fmnl2A2APV2 1086 aa9.97□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Bcl2l13P59017 434 aa9.97□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Aifm3Q3TY86 605 aa9.97□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Chd1lQ9CXF7 900 aa9.97□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Mcm3P25206 812 aaKnown RBP9.97□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Kif2cQ922S8 721 aa9.97□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Slx4ipQ9D7Y9 413 aa9.97□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Med14A2ABV5 1459 aaKnown RBP9.96□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Mctp1E9PV86 951 aa9.96□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Robo2Q7TPD3 1470 aa9.96□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Zkscan7E9PVW1 718 aa9.96□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Wdr78E9PYY5 807 aa9.96□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Igbp1bQ9QZ29 343 aa9.96□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Naip7Q9JIB3 1402 aa9.96□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Chpf2Q3UU43 768 aa9.96□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Tpm3-rs7D3Z2H9 248 aa9.95□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Cavin1O54724 392 aa9.95□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Map3k13Q1HKZ5 959 aa9.95□□□□□ -0.82
Bdnf-210ENSMUST00000111051 MarsQ68FL6 902 aaKnown RBP9.95□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Uhrf1bp1B2KF50 1429 aa9.95□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Map7d2A2AG50 781 aa9.95□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Ccne1Q61457 408 aa9.95□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Nol11Q8BJW5 723 aaKnown RBP9.95□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Znf608Q56A10 1511 aa9.95□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Astn2Q80Z10 1352 aa9.95□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Ptch1Q61115 1434 aa9.95□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Cfap58B2RW38 873 aa9.95□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Ppfia1B2RXQ2 1266 aa9.95□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Mmp8O70138 465 aa9.95□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Nucb2P81117 420 aa9.95□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Cfap99A0A140LIX9 648 aa9.94□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Prim1P20664 417 aa9.94□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Chl1P70232 1209 aa9.94□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Cplx2P84086 134 aa9.94□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Mum1Q6DID5 682 aa9.94□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Hnrnpul1Q8VDM6 859 aaKnown RBP9.94□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Mmel1Q9JLI3 765 aa9.94□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Cul9Q80TT8 1865 aa9.94□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Gzf1Q4VBD9 706 aa9.94□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Utp18Q5SSI6 552 aaKnown RBP9.94□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Pdzrn3Q69ZS0 1063 aa9.94□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Ccdc94Q9D6J3 314 aa9.94□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Dmrtc1Q9D9R7 182 aa9.94□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Mybbp1aQ7TPV4 1344 aaKnown RBP9.94□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Gm45140A0A0N4SUM8 220 aa9.93□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Arid4aF8VPQ2 1261 aaKnown RBP9.93□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Gimap6Q8K349 305 aa9.93□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Dnajc14Q921R4 703 aa9.93□□□□□ -0.82
Bdnf-210ENSMUST00000111051 ShprhQ7TPQ3 1674 aa9.93□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Iqsec2Q5DU25 1478 aa9.93□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Nphp3Q7TNH6 1325 aa9.93□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Stac3Q8BZ71 360 aa9.93□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Echdc1Q9D9V3 322 aa9.93□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Kiaa1210E9Q0C6 1637 aa9.93□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Cfap73J3QPZ5 306 aa9.93□□□□□ -0.82
Bdnf-210ENSMUST00000111051 CalcaP70160 136 aa9.93□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Btbd11Q6GQW0 1109 aa9.93□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Dnaaf4Q8R368 420 aa9.93□□□□□ -0.82
Bdnf-210ENSMUST00000111051 Mindy4Q3UQI9 744 aa9.92□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 11.4 ms