RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Cyp46a1Q9WVK8 500 aa9.07□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Cd22P35329 862 aa9.07□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Fam53cQ8BXQ8 393 aa9.07□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Mad1l1Q9WTX8 717 aaKnown RBP9.07□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Sart1Q9Z315 806 aaKnown RBP9.07□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Vamp4O70480 141 aa9.07□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Tpm1P58771 284 aa9.07□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Znf532Q6NXK2 1036 aa9.07□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Fam13aQ8BGI4 693 aa9.07□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Fam163aQ8CAA5 168 aa9.07□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Rassf4Q8CB96 322 aa9.07□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Stk24Q99KH8 431 aa9.07□□□□□ -0.96
Bdnf-209ENSMUST00000111050 EcsitQ9QZH6 435 aa9.07□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Uggt2E9Q4X2 1504 aa9.07□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Adgrl3Q80TS3 1537 aa9.06□□□□□ -0.96
Bdnf-209ENSMUST00000111050 NinlQ6ZQ12 1394 aa9.06□□□□□ -0.96
Bdnf-209ENSMUST00000111050 MccE9PWI3 1003 aa9.06□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Podxl2Q8CAE9 603 aa9.06□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Nup88Q8CEC0 753 aaKnown RBP9.06□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Tlcd1Q99JT6 247 aa9.06□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Cdc37l1Q9CZP7 335 aa9.06□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Odf2lQ9D478 642 aa9.06□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Stk3Q9JI10 497 aa9.06□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Spata31d1bE9QA57 1361 aa9.06□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Pik3r4Q8VD65 1358 aa9.06□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Elmsan1E9Q2I4 1089 aaKnown RBP9.06□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Chrm1P12657 460 aa9.06□□□□□ -0.96
Bdnf-209ENSMUST00000111050 CgnP59242 1191 aa9.06□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Dmrt2Q8BG36 561 aa9.06□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Jakmip1Q8BVL9 626 aa9.06□□□□□ -0.96
Bdnf-209ENSMUST00000111050 KinQ8K339 391 aa9.06□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Tyro3P55144 880 aa9.05□□□□□ -0.96
Bdnf-209ENSMUST00000111050 L1td1Q587J6 782 aaKnown RBP9.05□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Pnpla2Q8BJ56 486 aa9.05□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Ric3Q8BPM6 367 aa9.05□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Pof1bQ8K4L4 587 aa9.05□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Slx4ipQ9D7Y9 413 aa9.05□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Adgrl2Q8JZZ7 1487 aa9.05□□□□□ -0.96
Bdnf-209ENSMUST00000111050 AW822073A0A0N4SUK1 652 aa9.05□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Exoc6bA6H5Z3 810 aa9.05□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Ms4a1P19437 291 aa9.05□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Zbtb38Q3LR78 1197 aa9.05□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Wdr3Q8BHB4 942 aaKnown RBP9.05□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Stx6Q9JKK1 255 aa9.05□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Abcc6Q9R1S7 1498 aa9.05□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Caskin1Q6P9K8 1431 aa9.05□□□□□ -0.96
Bdnf-209ENSMUST00000111050 AU022751B1B0V2 589 aa9.05□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Hmox1P14901 289 aa9.05□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Paxbp1P58501 919 aa9.05□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Pdzrn3Q69ZS0 1063 aa9.05□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Brd2Q7JJ13 798 aaKnown RBP9.05□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Elf2Q9JHC9 593 aa9.05□□□□□ -0.96
Bdnf-209ENSMUST00000111050 PdcQ9QW08 244 aa9.05□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Zfyve16Q80U44 1528 aa9.05□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Mapkbp1Q6NS57 1503 aa9.05□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Atg4a-psA0A0G2JFS9 396 aa9.05□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Atg4aQ8C9S8 396 aa9.05□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Bicd2Q921C5 820 aa9.05□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Zfp804bA0A0G2JGH6 1343 aa9.04□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Usp48Q3V0C5 1052 aa9.04□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Spag5Q7TME2 1165 aa9.04□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Smarce1O54941 411 aaKnown RBP9.04□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Myo1cQ9WTI7 1063 aa9.04□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Hmx1O70218 332 aa9.04□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Ttll12Q3UDE2 639 aa9.04□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Ube2oQ6ZPJ3 1288 aa9.04□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Ncbp3Q8BZR9 615 aaKnown RBP9.04□□□□□ -0.96
Bdnf-209ENSMUST00000111050 RestQ8VIG1 1082 aa9.04□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Creld2Q9CYA0 350 aa9.04□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Golga5Q9QYE6 729 aa9.04□□□□□ -0.96
Bdnf-209ENSMUST00000111050 GscQ02591 256 aa9.03□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Smc3Q9CW03 1217 aaKnown RBP9.03□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Hmgn5Q9JL35 406 aa9.03□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Stag3O70576 1240 aa9.03□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Rfc1P35601 1131 aa9.03□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Speer4f2E9Q366 295 aa9.03□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Zkscan4Q5SZT6 480 aa9.03□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Ddx19aQ61655 478 aaKnown RBP9.03□□□□□ -0.96
Bdnf-209ENSMUST00000111050 Btn2a2A4QPC6 514 aa9.02□□□□□ -0.97
Bdnf-209ENSMUST00000111050 Mctp1E9PV86 951 aa9.02□□□□□ -0.97
Bdnf-209ENSMUST00000111050 Atp2b1G5E829 1220 aa9.02□□□□□ -0.97
Bdnf-209ENSMUST00000111050 Ranbp1P34022 203 aaKnown RBP9.02□□□□□ -0.97
Bdnf-209ENSMUST00000111050 Aifm3Q3TY86 605 aa9.02□□□□□ -0.97
Bdnf-209ENSMUST00000111050 Cnpy2Q9QXT0 182 aa9.02□□□□□ -0.97
Bdnf-209ENSMUST00000111050 Mcm6P97311 821 aa9.02□□□□□ -0.97
Bdnf-209ENSMUST00000111050 Nol10Q5RJG1 687 aaKnown RBP9.02□□□□□ -0.97
Bdnf-209ENSMUST00000111050 Utp18Q5SSI6 552 aaKnown RBP9.02□□□□□ -0.97
Bdnf-209ENSMUST00000111050 Recql4Q75NR7 1216 aaKnown RBP9.02□□□□□ -0.97
Bdnf-209ENSMUST00000111050 Ndufa8Q9DCJ5 172 aa9.02□□□□□ -0.97
Bdnf-209ENSMUST00000111050 TnmdQ9EP64 317 aa9.02□□□□□ -0.97
Bdnf-209ENSMUST00000111050 Zcchc17Q9ESX4 241 aaKnown RBP9.02□□□□□ -0.97
Bdnf-209ENSMUST00000111050 InsrP15208 1372 aa9.02□□□□□ -0.97
Bdnf-209ENSMUST00000111050 Cfap58B2RW38 873 aa9.02□□□□□ -0.97
Bdnf-209ENSMUST00000111050 Klra1P20937 262 aa9.02□□□□□ -0.97
Bdnf-209ENSMUST00000111050 Samsn1P57725 372 aa9.02□□□□□ -0.97
Bdnf-209ENSMUST00000111050 Rab11fip3Q8CHD8 1047 aa9.02□□□□□ -0.97
Bdnf-209ENSMUST00000111050 Frat2Q8K025 231 aa9.02□□□□□ -0.97
Bdnf-209ENSMUST00000111050 Wdr33Q8K4P0 1330 aaKnown RBP9.02□□□□□ -0.97
Bdnf-209ENSMUST00000111050 Cfap65Q3V0B4 1847 aa9.02□□□□□ -0.97
Bdnf-209ENSMUST00000111050 Med14A2ABV5 1459 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 37.4 ms