RNA–Protein interactions for RNA: ENSMUST00000109546.8

Vcan-203, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 12,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-203ENSMUST00000109546 Q9D2X8 372 aa7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 Ppp2r3aB2RXC8 1150 aa7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 Fam184bQ0KK56 942 aa7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 Prpf4bQ61136 1007 aaKnown RBP7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 Tubb2aQ7TMM9 445 aa7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 Tubb2bQ9CWF2 445 aa7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 Ccdc172Q810N9 267 aa7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 Brd3Q8K2F0 726 aaKnown RBP7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 JmyQ9QXM1 983 aa7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 Cdc45Q9Z1X9 566 aa7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 Ccdc121E9Q6D3 323 aa7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 Ccdc60Q8C4J0 545 aa7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 Tsg101Q61187 391 aa7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 Kiaa1524Q8BWY9 907 aa7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 Snw1Q9CSN1 536 aaKnown RBP7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 Krt90E9Q1Z0 538 aa7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 Capza3P70190 299 aa7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 Znf365Q8BG89 408 aa7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 Tagap1P0CAX8 505 aa7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 Zhx1P70121 873 aa7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 Spc25Q3UA16 226 aa7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 Fgfr1opQ66JX5 399 aa7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 Znf330Q922H9 316 aa7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 Nup88Q8CEC0 753 aaKnown RBP7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 4930548H24RikQ9D496 437 aa7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 Rnf34Q99KR6 376 aa7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 Dnajc21E9Q8D0 531 aa7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 Zc3h18Q0P678 948 aaKnown RBP7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 Ehmt1Q5DW34 1296 aa7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 Ms4a1P19437 291 aa7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 Gtf2f1Q3THK3 508 aaKnown RBP7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 Sdad1Q80UZ2 687 aaKnown RBP7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 Pdcd7Q9WTY1 482 aa7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 Cyp46a1Q9WVK8 500 aa7.03□□□□□ -1.28
Vcan-203ENSMUST00000109546 G3bp1P97855 465 aaKnown RBP7.02□□□□□ -1.29
Vcan-203ENSMUST00000109546 Atad3Q925I1 591 aa7.02□□□□□ -1.29
Vcan-203ENSMUST00000109546 Capn2O08529 700 aa7.02□□□□□ -1.29
Vcan-203ENSMUST00000109546 Rbm28Q8CGC6 750 aaKnown RBP7.02□□□□□ -1.29
Vcan-203ENSMUST00000109546 AdnpQ9Z103 1108 aaKnown RBP7.02□□□□□ -1.29
Vcan-203ENSMUST00000109546 Setdb1O88974 1307 aa7.02□□□□□ -1.29
Vcan-203ENSMUST00000109546 HdxQ14B70 692 aa7.02□□□□□ -1.29
Vcan-203ENSMUST00000109546 Ctnna2Q61301 953 aa7.02□□□□□ -1.29
Vcan-203ENSMUST00000109546 Daam2Q80U19 1115 aa7.02□□□□□ -1.29
Vcan-203ENSMUST00000109546 Agbl1Q09M05 972 aa7.02□□□□□ -1.29
Vcan-203ENSMUST00000109546 Ccdc89Q9DA73 370 aa7.02□□□□□ -1.29
Vcan-203ENSMUST00000109546 Golga5Q9QYE6 729 aa7.02□□□□□ -1.29
Vcan-203ENSMUST00000109546 Top1Q04750 767 aaKnown RBP7.02□□□□□ -1.29
Vcan-203ENSMUST00000109546 Cracr2aQ3UP38 310 aa7.02□□□□□ -1.29
Vcan-203ENSMUST00000109546 Tspyl2Q7TQI8 677 aa7.02□□□□□ -1.29
Vcan-203ENSMUST00000109546 Bicd1Q8BR07 835 aa7.02□□□□□ -1.29
Vcan-203ENSMUST00000109546 Baz1aO88379 1555 aa7.02□□□□□ -1.29
Vcan-203ENSMUST00000109546 Ddx19aQ61655 478 aaKnown RBP7.02□□□□□ -1.29
Vcan-203ENSMUST00000109546 Hdac9Q99N13 588 aa7.02□□□□□ -1.29
Vcan-203ENSMUST00000109546 Hip1rQ9JKY5 1068 aa7.02□□□□□ -1.29
Vcan-203ENSMUST00000109546 Washc2Q6PGL7 1334 aa7.02□□□□□ -1.29
Vcan-203ENSMUST00000109546 ErmnQ5EBJ4 281 aa7.01□□□□□ -1.29
Vcan-203ENSMUST00000109546 Gm21190A0A0G2JGJ6 266 aa7.01□□□□□ -1.29
Vcan-203ENSMUST00000109546 Pde1cQ64338 706 aa7.01□□□□□ -1.29
Vcan-203ENSMUST00000109546 Cep135Q6P5D4 1140 aa7.01□□□□□ -1.29
Vcan-203ENSMUST00000109546 Micall1Q8BGT6 870 aa7.01□□□□□ -1.29
Vcan-203ENSMUST00000109546 Mctp1E9PV86 951 aa7.01□□□□□ -1.29
Vcan-203ENSMUST00000109546 Daam1Q8BPM0 1077 aa7.01□□□□□ -1.29
Vcan-203ENSMUST00000109546 Cdk5rap3Q99LM2 503 aa7.01□□□□□ -1.29
Vcan-203ENSMUST00000109546 Mphosph6Q9D1Q1 161 aa7.01□□□□□ -1.29
Vcan-203ENSMUST00000109546 Rabgap1A2AWA9 1064 aa7.01□□□□□ -1.29
Vcan-203ENSMUST00000109546 Stx1aO35526 288 aa7.01□□□□□ -1.29
Vcan-203ENSMUST00000109546 Trim11Q99PQ2 467 aa7.01□□□□□ -1.29
Vcan-203ENSMUST00000109546 Pibf1E9Q6K3 756 aa7.01□□□□□ -1.29
Vcan-203ENSMUST00000109546 Mier3Q3UHF3 551 aa7.01□□□□□ -1.29
Vcan-203ENSMUST00000109546 Actr5Q80US4 605 aaKnown RBP7.01□□□□□ -1.29
Vcan-203ENSMUST00000109546 Cc2d1aQ8K1A6 943 aa7.01□□□□□ -1.29
Vcan-203ENSMUST00000109546 Apbb1ipQ8R5A3 670 aa7.01□□□□□ -1.29
Vcan-203ENSMUST00000109546 Trove2O08848 538 aa7.01□□□□□ -1.29
Vcan-203ENSMUST00000109546 Cdca8Q8BHX3 289 aa7.01□□□□□ -1.29
Vcan-203ENSMUST00000109546 CrbnQ8C7D2 445 aa7.01□□□□□ -1.29
Vcan-203ENSMUST00000109546 Eps15P42567 897 aa7.01□□□□□ -1.29
Vcan-203ENSMUST00000109546 Fnbp4Q6ZQ03 1031 aa7.01□□□□□ -1.29
Vcan-203ENSMUST00000109546 Spats2lQ91WJ7 558 aaKnown RBP7.01□□□□□ -1.29
Vcan-203ENSMUST00000109546 Trim7Q923T7 510 aa7.01□□□□□ -1.29
Vcan-203ENSMUST00000109546 Rcan3Q9JKK0 239 aa7.01□□□□□ -1.29
Vcan-203ENSMUST00000109546 Kif15Q6P9L6 1387 aa7.01□□□□□ -1.29
Vcan-203ENSMUST00000109546 Dzip1Q8BMD2 852 aa7□□□□□ -1.29
Vcan-203ENSMUST00000109546 Sptbn5F6UCX4 1208 aa7□□□□□ -1.29
Vcan-203ENSMUST00000109546 Psmc4P54775 418 aa7□□□□□ -1.29
Vcan-203ENSMUST00000109546 Ddx49Q4FZF3 480 aaKnown RBP7□□□□□ -1.29
Vcan-203ENSMUST00000109546 Gas8Q60779 478 aa7□□□□□ -1.29
Vcan-203ENSMUST00000109546 Prpf31Q8CCF0 499 aaKnown RBP7□□□□□ -1.29
Vcan-203ENSMUST00000109546 Kif6E9PX57 802 aa7□□□□□ -1.29
Vcan-203ENSMUST00000109546 Cnnm3Q32NY4 713 aa7□□□□□ -1.29
Vcan-203ENSMUST00000109546 Tsga10Q6NY15 697 aa7□□□□□ -1.29
Vcan-203ENSMUST00000109546 Psmd6Q99JI4 389 aa7□□□□□ -1.29
Vcan-203ENSMUST00000109546 Plppr3Q7TPB0 716 aa7□□□□□ -1.29
Vcan-203ENSMUST00000109546 Knop1Q9Z2Q2 478 aaKnown RBP7□□□□□ -1.29
Vcan-203ENSMUST00000109546 Gm28919A0A087WP35 240 aa7□□□□□ -1.29
Vcan-203ENSMUST00000109546 Ncbp1Q3UYV9 790 aaKnown RBP7□□□□□ -1.29
Vcan-203ENSMUST00000109546 Ccdc92Q8VDN4 314 aa7□□□□□ -1.29
Vcan-203ENSMUST00000109546 Xab2Q9DCD2 855 aaKnown RBP7□□□□□ -1.29
Vcan-203ENSMUST00000109546 PalmdQ9JHU2 551 aa7□□□□□ -1.29
Vcan-203ENSMUST00000109546 Mrpl40Q9Z2Q5 206 aa7□□□□□ -1.29
Vcan-203ENSMUST00000109546 Zmynd8A2A484 1235 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 79.5 ms