RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Asic4Q7TNS7 539 aa18.55■□□□□ 0.56
Nup88-202ENSMUST00000108530 FocadA2AKG8 1798 aa18.55■□□□□ 0.56
Nup88-202ENSMUST00000108530 CoilQ5SU73 570 aa18.54■□□□□ 0.56
Nup88-202ENSMUST00000108530 Ddx54Q8K4L0 874 aaKnown RBP18.54■□□□□ 0.56
Nup88-202ENSMUST00000108530 GckrQ91X44 587 aa18.54■□□□□ 0.56
Nup88-202ENSMUST00000108530 Tns2Q8CGB6 1400 aa18.54■□□□□ 0.56
Nup88-202ENSMUST00000108530 4930572O03RikQ8C5Y0 211 aa18.54■□□□□ 0.56
Nup88-202ENSMUST00000108530 Kif18aQ91WD7 886 aa18.54■□□□□ 0.56
Nup88-202ENSMUST00000108530 ZgpatQ8VDM1 511 aa18.53■□□□□ 0.56
Nup88-202ENSMUST00000108530 Cnksr1A2A9K7 700 aa18.53■□□□□ 0.56
Nup88-202ENSMUST00000108530 Fam13aQ8BGI4 693 aa18.53■□□□□ 0.56
Nup88-202ENSMUST00000108530 CarsQ9ER72 831 aaKnown RBP18.53■□□□□ 0.56
Nup88-202ENSMUST00000108530 Plekhd1B2RPU2 505 aa18.52■□□□□ 0.56
Nup88-202ENSMUST00000108530 Tm6sf1P58749 370 aa18.52■□□□□ 0.56
Nup88-202ENSMUST00000108530 Ipo9Q91YE6 1041 aa18.52■□□□□ 0.56
Nup88-202ENSMUST00000108530 Brd1E9PZ26 1189 aaKnown RBP18.52■□□□□ 0.55
Nup88-202ENSMUST00000108530 Tnks1bp1P58871 1720 aa18.51■□□□□ 0.55
Nup88-202ENSMUST00000108530 Gm21663A0A0G2JE01 267 aa18.51■□□□□ 0.55
Nup88-202ENSMUST00000108530 Gm21680A0A0G2JGR8 267 aa18.51■□□□□ 0.55
Nup88-202ENSMUST00000108530 Exoc6bA6H5Z3 810 aa18.51■□□□□ 0.55
Nup88-202ENSMUST00000108530 Gm7361D3Z6R1 267 aa18.51■□□□□ 0.55
Nup88-202ENSMUST00000108530 5031410I06RikE9Q4E0 267 aa18.51■□□□□ 0.55
Nup88-202ENSMUST00000108530 Gm1979E9QAN3 267 aa18.51■□□□□ 0.55
Nup88-202ENSMUST00000108530 Gm5862K7N5V5 267 aa18.51■□□□□ 0.55
Nup88-202ENSMUST00000108530 Gm10220K7N660 267 aa18.51■□□□□ 0.55
Nup88-202ENSMUST00000108530 Ipo8Q7TMY7 1010 aa18.5■□□□□ 0.55
Nup88-202ENSMUST00000108530 Cog6Q8R3I3 657 aa18.5■□□□□ 0.55
Nup88-202ENSMUST00000108530 PigbQ9JJQ0 542 aa18.5■□□□□ 0.55
Nup88-202ENSMUST00000108530 Phlpp2Q8BXA7 1320 aa18.5■□□□□ 0.55
Nup88-202ENSMUST00000108530 Smarca5Q91ZW3 1051 aaKnown RBP18.49■□□□□ 0.55
Nup88-202ENSMUST00000108530 FanclQ9CR14 375 aa18.49■□□□□ 0.55
Nup88-202ENSMUST00000108530 Wwc1Q5SXA9 1104 aa18.49■□□□□ 0.55
Nup88-202ENSMUST00000108530 Slx1bQ8BX32 270 aa18.49■□□□□ 0.55
Nup88-202ENSMUST00000108530 Slc5a1Q8C3K6 665 aa18.48■□□□□ 0.55
Nup88-202ENSMUST00000108530 HnrnpuQ8VEK3 800 aaKnown RBP18.48■□□□□ 0.55
Nup88-202ENSMUST00000108530 Ccdc146E9Q9F7 977 aa18.48■□□□□ 0.55
Nup88-202ENSMUST00000108530 LifrP42703 1092 aa18.48■□□□□ 0.55
Nup88-202ENSMUST00000108530 SympkQ80X82 1284 aa18.48■□□□□ 0.55
Nup88-202ENSMUST00000108530 Eif3bQ8JZQ9 803 aaKnown RBP18.48■□□□□ 0.55
Nup88-202ENSMUST00000108530 Pdia6Q922R8 440 aaKnown RBP18.48■□□□□ 0.55
Nup88-202ENSMUST00000108530 Zap70P43404 618 aa18.47■□□□□ 0.55
Nup88-202ENSMUST00000108530 Gnai2P08752 355 aaKnown RBP18.47■□□□□ 0.55
Nup88-202ENSMUST00000108530 Igfbp6P47880 238 aa18.47■□□□□ 0.55
Nup88-202ENSMUST00000108530 Cnnm1Q0GA42 951 aa18.47■□□□□ 0.55
Nup88-202ENSMUST00000108530 PsapQ61207 557 aaKnown RBP18.47■□□□□ 0.55
Nup88-202ENSMUST00000108530 Taf7Q9R1C0 341 aa18.47■□□□□ 0.55
Nup88-202ENSMUST00000108530 Map7O88735 730 aa18.46■□□□□ 0.55
Nup88-202ENSMUST00000108530 Map3k13Q1HKZ5 959 aa18.46■□□□□ 0.55
Nup88-202ENSMUST00000108530 Prkab2Q6PAM0 271 aa18.46■□□□□ 0.55
Nup88-202ENSMUST00000108530 Znf526Q8BI66 675 aa18.46■□□□□ 0.55
Nup88-202ENSMUST00000108530 Echdc1Q9D9V3 322 aa18.46■□□□□ 0.55
Nup88-202ENSMUST00000108530 Eif4g2Q62448 906 aaKnown RBP18.46■□□□□ 0.55
Nup88-202ENSMUST00000108530 PrkcshO08795 521 aa18.45■□□□□ 0.54
Nup88-202ENSMUST00000108530 Hsp90ab1P11499 724 aaKnown RBP18.45■□□□□ 0.54
Nup88-202ENSMUST00000108530 Adcy9P51830 1353 aa18.45■□□□□ 0.54
Nup88-202ENSMUST00000108530 ArxO35085 564 aa18.45■□□□□ 0.54
Nup88-202ENSMUST00000108530 Srgap3Q812A2 1099 aa18.45■□□□□ 0.54
Nup88-202ENSMUST00000108530 Tmem119Q8R138 280 aa18.45■□□□□ 0.54
Nup88-202ENSMUST00000108530 Pard3Q99NH2 1333 aa18.44■□□□□ 0.54
Nup88-202ENSMUST00000108530 Iqsec3Q3TES0 1195 aa18.44■□□□□ 0.54
Nup88-202ENSMUST00000108530 Map3k2Q61083 619 aa18.44■□□□□ 0.54
Nup88-202ENSMUST00000108530 Mphosph10Q810V0 681 aaKnown RBP18.44■□□□□ 0.54
Nup88-202ENSMUST00000108530 Slc39a6Q8C145 765 aa18.44■□□□□ 0.54
Nup88-202ENSMUST00000108530 Ssfa2Q922B9 1252 aa18.44■□□□□ 0.54
Nup88-202ENSMUST00000108530 Eif2s2Q99L45 331 aaKnown RBP18.44■□□□□ 0.54
Nup88-202ENSMUST00000108530 CanxP35564 591 aaKnown RBP18.44■□□□□ 0.54
Nup88-202ENSMUST00000108530 Ppp1r42Q8R1Z4 357 aa18.44■□□□□ 0.54
Nup88-202ENSMUST00000108530 Ybx3Q9JKB3 361 aaKnown RBP18.44■□□□□ 0.54
Nup88-202ENSMUST00000108530 Cfdp1O88271 295 aaKnown RBP18.43■□□□□ 0.54
Nup88-202ENSMUST00000108530 Bend3Q6PAL0 825 aa18.43■□□□□ 0.54
Nup88-202ENSMUST00000108530 Efcab2Q9CQ46 164 aa18.43■□□□□ 0.54
Nup88-202ENSMUST00000108530 Mfap1aC0HKD8 439 aaKnown RBP18.42■□□□□ 0.54
Nup88-202ENSMUST00000108530 Mfap1bC0HKD9 439 aaKnown RBP18.42■□□□□ 0.54
Nup88-202ENSMUST00000108530 Hspa2P17156 633 aa18.42■□□□□ 0.54
Nup88-202ENSMUST00000108530 Cwc27Q3TKY6 469 aa18.42■□□□□ 0.54
Nup88-202ENSMUST00000108530 Cetn4Q8K4K1 168 aa18.42■□□□□ 0.54
Nup88-202ENSMUST00000108530 Bcl2l12Q9D3J3 255 aa18.42■□□□□ 0.54
Nup88-202ENSMUST00000108530 TefQ9JLC6 301 aa18.42■□□□□ 0.54
Nup88-202ENSMUST00000108530 Wdr63B2RY71 923 aa18.42■□□□□ 0.54
Nup88-202ENSMUST00000108530 Qtrt2B8ZXI1 415 aa18.42■□□□□ 0.54
Nup88-202ENSMUST00000108530 Nkx1-2P42580 305 aa18.42■□□□□ 0.54
Nup88-202ENSMUST00000108530 Tlr7P58681 1050 aa18.42■□□□□ 0.54
Nup88-202ENSMUST00000108530 Ints5Q8CHT3 1018 aa18.42■□□□□ 0.54
Nup88-202ENSMUST00000108530 Ttll7A4Q9F0 912 aa18.41■□□□□ 0.54
Nup88-202ENSMUST00000108530 Ccdc27Q3V036 639 aa18.41■□□□□ 0.54
Nup88-202ENSMUST00000108530 BcorQ8CGN4 1759 aa18.41■□□□□ 0.54
Nup88-202ENSMUST00000108530 Irf9Q61179 399 aa18.4■□□□□ 0.54
Nup88-202ENSMUST00000108530 KnstrnQ9D9Z1 312 aaKnown RBP18.4■□□□□ 0.54
Nup88-202ENSMUST00000108530 Atg4a-psA0A0G2JFS9 396 aa18.4■□□□□ 0.54
Nup88-202ENSMUST00000108530 Aldh8a1Q8BH00 487 aa18.4■□□□□ 0.54
Nup88-202ENSMUST00000108530 Atg4aQ8C9S8 396 aa18.4■□□□□ 0.54
Nup88-202ENSMUST00000108530 Ubr2Q6WKZ8 1755 aa18.39■□□□□ 0.54
Nup88-202ENSMUST00000108530 Stk36Q69ZM6 1316 aa18.39■□□□□ 0.53
Nup88-202ENSMUST00000108530 Akap11E9Q777 1895 aa18.38■□□□□ 0.53
Nup88-202ENSMUST00000108530 Flt4P35917 1363 aa18.38■□□□□ 0.53
Nup88-202ENSMUST00000108530 Atp8b2P98199 1209 aa18.38■□□□□ 0.53
Nup88-202ENSMUST00000108530 Bicc1Q99MQ1 977 aaKnown RBP18.38■□□□□ 0.53
Nup88-202ENSMUST00000108530 Nphp1Q9QY53 687 aa18.38■□□□□ 0.53
Nup88-202ENSMUST00000108530 Tom1O88746 492 aa18.36■□□□□ 0.53
Nup88-202ENSMUST00000108530 Clcn1Q64347 994 aa18.36■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms