RNA–Protein interactions for RNA: ENSMUST00000100026.9

Ccdc50-203, Transcript of Coiled-coil domain-containing protein 50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc50, Length 7,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-203ENSMUST00000100026 Terf1P70371 421 aa17.77■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Ttll12Q3UDE2 639 aa17.77■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Irf9Q61179 399 aa17.76■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Ano8Q6PB70 1060 aa17.76■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Cfap45Q9D9U9 551 aa17.76■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Zc3h12cQ5DTV4 884 aa17.76■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Ift74Q8BKE9 600 aa17.76■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Nip7Q9CXK8 180 aaKnown RBP17.76■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Lamb3Q61087 1168 aa17.76■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Bag3Q9JLV1 577 aaKnown RBP17.76■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Plekhg2Q6KAU7 1340 aa17.76■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 CastP51125 788 aa17.75■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Maco1Q7TQE6 664 aaKnown RBP17.75■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Pet2A2AHY8 747 aa17.75■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Smarca5Q91ZW3 1051 aaKnown RBP17.75■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Magi1Q6RHR9 1471 aa17.75■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Ccar2Q8VDP4 922 aaKnown RBP17.75■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Tmem94Q7TSH8 1360 aa17.75■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 ParvgQ9ERD8 331 aa17.74■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 PtprkP35822 1457 aa17.74■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Fbxo2Q80UW2 297 aa17.74■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Knop1Q9Z2Q2 478 aaKnown RBP17.74■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Mroh2bQ7M6Y6 1581 aa17.74■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Nphp3Q7TNH6 1325 aa17.73■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Ppp6r1Q7TSI3 856 aa17.73■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Sos1Q62245 1319 aa17.73■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Kdm2bQ6P1G2 1309 aa17.73■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Cetn1P41209 172 aa17.73■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Glg1Q61543 1175 aaKnown RBP17.73■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Tmem67Q8BR76 992 aa17.73■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Nup88Q8CEC0 753 aaKnown RBP17.73■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Dph6Q9CQ28 267 aa17.73■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Cdkn1cP49919 348 aa17.73■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Traf3ip1Q149C2 625 aa17.73■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Tsg101Q61187 391 aa17.73■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Rapgef3Q8VCC8 918 aa17.73■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Arhgef18Q6P9R4 1021 aa17.72■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Nop14Q8R3N1 860 aaKnown RBP17.72■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Gimap8Q75N62 688 aa17.72■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Fez1Q8K0X8 392 aa17.72■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Phldb2Q8K1N2 1249 aa17.72■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Kifc2O08672 792 aa17.71■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Cwc25Q9DBF7 416 aa17.71■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Noc2lQ9WV70 747 aaKnown RBP17.71■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Cfap58B2RW38 873 aa17.71■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Map3k2Q61083 619 aa17.71■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Frmpd1A2AKB4 1549 aa17.71■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Nfxl1E9Q8I7 918 aaKnown RBP17.71■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Slc4a2P13808 1237 aaKnown RBP17.71■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 TrhQ62361 256 aa17.71■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Ppp1r42Q8R1Z4 357 aa17.71■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Izumo3A6PWV3 263 aa17.71■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Idi2Q8BFZ6 227 aa17.71■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Rnf41Q8BH75 317 aa17.71■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Cc2d1bQ8BRN9 848 aa17.71■□□□□ 0.43
Ccdc50-203ENSMUST00000100026 Nsrp1Q5NCR9 542 aa17.7■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Cyp2ab1S4R196 498 aa17.7■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Frmpd2A0A140LI67 1392 aa17.7■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Olfml1Q8BSH2 233 aa17.7■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Bag4Q8CI61 457 aa17.7■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Gnat3Q3V3I2 354 aa17.7■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Hdac9Q99N13 588 aa17.7■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Speer4dL7N216 212 aa17.7■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Rbm27Q5SFM8 1060 aaKnown RBP17.7■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Znf131Q8K3J5 619 aa17.7■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Serpina10Q8R121 448 aa17.7■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Pdcd6ipQ9WU78 869 aaKnown RBP17.7■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 NexmifQ5DTT1 1515 aa17.69■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 CenpqQ9CPQ5 267 aa17.69■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Nat10Q8K224 1024 aaKnown RBP17.69■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Rbm19Q8R3C6 952 aaKnown RBP17.69■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Cetn2Q9R1K9 172 aa17.69■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Psmd1Q3TXS7 953 aa17.69■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Gas2l3Q3UWW6 683 aa17.69■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Caskin1Q6P9K8 1431 aa17.69■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 PrxO55103 1391 aa17.68■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Ccnl1Q52KE7 532 aaKnown RBP17.68■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Hoxa7P02830 229 aa17.68■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Hs6st3Q9QYK4 470 aa17.68■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Arap1Q4LDD4 1452 aa17.68■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Rad23bP54728 416 aa17.68■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Efcab2Q9CQ46 164 aa17.68■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Txndc16Q7TN22 820 aa17.67■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Gnl2Q99LH1 728 aaKnown RBP17.67■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Ncapd3Q6ZQK0 1506 aa17.67■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Chpf2Q3UU43 768 aa17.67■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Ddx46Q569Z5 1032 aaKnown RBP17.67■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Plekho1Q9JIY0 408 aa17.67■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Mug1P28665 1476 aa17.67■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Pof1bQ8K4L4 587 aa17.66■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Mcm10Q0VBD2 885 aa17.66■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 ZwintQ9CQU5 252 aa17.66■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Ankle2Q6P1H6 964 aa17.66■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Tmem87bQ8BKU8 555 aa17.66■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Map3k1P53349 1493 aa17.66■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Fbf1A2A870 1173 aa17.66■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Aplp1Q03157 653 aa17.66■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 Aldh1l1Q8R0Y6 902 aa17.66■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 TxlnbQ8VBT1 685 aa17.66■□□□□ 0.42
Ccdc50-203ENSMUST00000100026 SnrkQ8VDU5 748 aa17.65■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms