RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Cap2Q9CYT6 476 aa12.65□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Nup153E9Q3G8 1462 aaKnown RBP12.64□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Abcc12Q80WJ6 1366 aa12.64□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Aifm3Q3TY86 605 aa12.64□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Q3UPC7 1272 aa12.64□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 SafbD3YXK2 937 aaKnown RBP12.64□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Trim58Q5NCC9 485 aa12.64□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Hdac6Q9Z2V5 1149 aa12.64□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 PsapQ61207 557 aaKnown RBP12.63□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Tspyl2Q7TQI8 677 aa12.63□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Nhsl1Q8CAF4 1587 aa12.63□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Tns2Q8CGB6 1400 aa12.62□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Ppfibp2O35711 882 aa12.62□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 GakQ99KY4 1305 aa12.62□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Gm38655A0A286YDK6 273 aa12.61□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Fgd1P52734 960 aa12.61□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Jmjd4Q8BFT6 427 aa12.61□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Armcx1Q9CX83 456 aa12.61□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Nsd3Q6P2L6 1439 aa12.61□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Maco1Q7TQE6 664 aaKnown RBP12.61□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Flad1Q8R123 492 aa12.61□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Taf7Q9R1C0 341 aa12.61□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Col1a2Q01149 1372 aa12.61□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Vps33bP59016 617 aa12.6□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Atf5O70191 283 aa12.6□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Kiaa0319Q5SZV5 1081 aa12.6□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 AceP09470 1312 aa12.6□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Dcaf5Q80T85 946 aa12.6□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 SympkQ80X82 1284 aa12.6□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Miga2Q8BK03 593 aa12.59□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Exoc6bA6H5Z3 810 aa12.59□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Atg3Q9CPX6 314 aa12.59□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Syde2E9PUP1 1314 aa12.59□□□□□ -0.39
Ccdc38-201ENSMUST00000092215 Lrit1Q8K099 624 aa12.58□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Zcrb1Q9CZ96 217 aaKnown RBP12.58□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Shank2Q80Z38 1476 aa12.58□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 FocadA2AKG8 1798 aa12.58□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Chl1P70232 1209 aa12.58□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Aldh1l1Q8R0Y6 902 aa12.58□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Igsf1Q7TQA1 1317 aa12.58□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Trpm3Q5F4S9 1721 aa12.58□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Iqsec3Q3TES0 1195 aa12.57□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Slc4a3P16283 1227 aa12.57□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Nip7Q9CXK8 180 aaKnown RBP12.57□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Adgrb1Q3UHD1 1582 aa12.57□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Hspa2P17156 633 aa12.57□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Map3k13Q1HKZ5 959 aa12.57□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Cluap1Q8R3P7 413 aa12.57□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Mst1rQ62190 1378 aa12.57□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Mphosph10Q810V0 681 aaKnown RBP12.56□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Ttll7A4Q9F0 912 aa12.56□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Rtn4Q99P72 1162 aaKnown RBP12.56□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Crb1Q8VHS2 1405 aa12.55□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Strn4P58404 760 aa12.55□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Cfdp1O88271 295 aaKnown RBP12.55□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Tnrc6cQ3UHC0 1690 aaKnown RBP12.55□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Pdia6Q922R8 440 aaKnown RBP12.55□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Ttc41Q692V3 1318 aa12.54□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Cacna1sQ02789 1880 aa12.54□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 GalcP54818 684 aa12.53□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Map3k2Q61083 619 aa12.53□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Cavin2Q63918 418 aaKnown RBP12.53□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Ankrd13dQ6PD24 605 aa12.53□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Nwd2Q6P5U7 1742 aa12.53□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Cnksr1A2A9K7 700 aa12.53□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Igfbp6P47880 238 aa12.53□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Smarcc1P97496 1104 aa12.53□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Irf9Q61179 399 aa12.53□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Fer1l6E0CZ42 1862 aa12.53□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 Triml2E9PW10 424 aa12.52□□□□□ -0.4
Ccdc38-201ENSMUST00000092215 4930523C07RikE9Q2T4 99 aa12.52□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Zap70P43404 618 aa12.52□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Pde4dQ01063 747 aa12.52□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Gm12185Q5NCB2 835 aa12.52□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 CoilQ5SU73 570 aa12.52□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Ltbp1Q8CG19 1712 aa12.52□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Echdc1Q9D9V3 322 aa12.52□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Pnpla7A2AJ88 1352 aa12.51□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Cyp2d11P24457 504 aa12.51□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Adam1aQ60813 791 aa12.51□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 MarsQ68FL6 902 aaKnown RBP12.51□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Slfnl1Q8BHW9 410 aa12.51□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Ppp4r2Q0VGB7 417 aa12.51□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Tmem119Q8R138 280 aa12.51□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Zbtb1Q91VL9 713 aa12.51□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Rps6ka4Q9Z2B9 773 aa12.51□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Disp3A3KFU9 1347 aa12.51□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Tnks1bp1P58871 1720 aa12.51□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Msh6P54276 1358 aaKnown RBP12.51□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Ppp6r1Q7TSI3 856 aa12.51□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Bicc1Q99MQ1 977 aaKnown RBP12.51□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Mbd3Q9Z2D8 285 aaKnown RBP12.51□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 DiexfQ8BTT6 772 aaKnown RBP12.5□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 MvpQ9EQK5 861 aa12.5□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Arhgap33Q80YF9 1305 aa12.5□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Dbr1Q923B1 550 aa12.5□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Ankib1Q6ZPS6 1085 aa12.49□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Rapgef4Q9EQZ6 1011 aa12.49□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Chrna2Q91X60 512 aa12.49□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Afg3l2Q8JZQ2 802 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 11.7 ms