RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Ccdc112A0AUP1 442 aa16.22■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Top2bQ64511 1612 aa16.22■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Zhx1P70121 873 aa16.22■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Ctr9Q62018 1173 aaKnown RBP16.22■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Sos1Q62245 1319 aa16.22■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Flad1Q8R123 492 aa16.22■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Mapk8ip1Q9WVI9 707 aa16.22■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Cc2d1bQ8BRN9 848 aa16.21■□□□□ 0.19
Col3a1-201ENSMUST00000087883 ClasrpQ8CFC7 668 aa16.21■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Txndc16Q7TN22 820 aa16.21■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Skor1Q8BX46 964 aa16.21■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Tmx4Q8C0L0 335 aa16.21■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Igbp1bQ9QZ29 343 aa16.21■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Ccdc66Q6NS45 935 aa16.21■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Ccdc150Q8CDI7 1110 aa16.21■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Bin1O08539 588 aaKnown RBP16.21■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Tnni2P13412 182 aa16.21■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Prkar2bP31324 416 aa16.21■□□□□ 0.19
Col3a1-201ENSMUST00000087883 Ces1hD3Z298 562 aa16.21■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Ercc3P49135 783 aa16.2■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Homer1Q9Z2Y3 366 aa16.2■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Tbc1d9Q3UYK3 1264 aa16.2■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Tsg101Q61187 391 aa16.2■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Nup133Q8R0G9 1155 aa16.2■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Stx6Q9JKK1 255 aa16.2■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Smc1aQ9CU62 1233 aaKnown RBP16.2■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Bcar3Q9QZK2 820 aa16.2■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Limch1Q3UH68 1057 aa16.2■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Fkbp5Q64378 456 aa16.2■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Gimap6Q8K349 305 aa16.2■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Arap1Q4LDD4 1452 aa16.19■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Ncbp1Q3UYV9 790 aaKnown RBP16.19■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Znf653Q6YND2 615 aa16.19■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Vps18Q8R307 973 aa16.19■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Cep120Q7TSG1 988 aa16.19■□□□□ 0.18
Col3a1-201ENSMUST00000087883 EvcP57680 1005 aa16.19■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Plekhm2Q80TQ5 1018 aa16.19■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Trim34aQ99PP6 485 aa16.19■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Gm21680A0A0G2JGR8 267 aa16.19■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Polr3dQ91WD1 398 aa16.19■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Cetn2Q9R1K9 172 aa16.19■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Riok1Q922Q2 567 aa16.18■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Ccdc178Q8CDV0 866 aa16.18■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Nucb2P81117 420 aa16.18■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Pabpn1Q8CCS6 302 aaKnown RBP16.18■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Sf3b2Q3UJB0 878 aaKnown RBP16.18■□□□□ 0.18
Col3a1-201ENSMUST00000087883 RalylQ8BTF8 293 aa16.18■□□□□ 0.18
Col3a1-201ENSMUST00000087883 TkfcQ8VC30 578 aa16.18■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Cct2P80314 535 aaKnown RBP16.17■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Ankrd1Q9CR42 319 aa16.17■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Nap1l5Q9JJF0 156 aa16.17■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Phlpp2Q8BXA7 1320 aa16.17■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Ube2hP62257 183 aa16.17■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Ltv1Q6NSQ7 470 aaKnown RBP16.17■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Evi5lH3BKQ3 813 aa16.17■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Serpinb6bO08804 377 aa16.17■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Smtnl1Q99LM3 459 aa16.17■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Cfap53Q9D439 514 aa16.16■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Bag3Q9JLV1 577 aaKnown RBP16.16■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Nfxl1E9Q8I7 918 aaKnown RBP16.16■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Strn4P58404 760 aa16.16■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Tmem67Q8BR76 992 aa16.16■□□□□ 0.18
Col3a1-201ENSMUST00000087883 BicraF8VPZ9 1578 aa16.16■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Gng11P61953 73 aa16.16■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Ccdc12Q8R344 166 aaKnown RBP16.16■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Rad23bP54728 416 aa16.16■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Ankib1Q6ZPS6 1085 aa16.16■□□□□ 0.18
Col3a1-201ENSMUST00000087883 CebpzP53569 1052 aaKnown RBP16.16■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Naa15Q80UM3 865 aaKnown RBP16.16■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Sdc2P43407 202 aa16.15■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Smarcc1P97496 1104 aa16.15■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Pip4k2bQ80XI4 416 aa16.15■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Vps37cQ8R105 352 aa16.15■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Rapgef4Q9EQZ6 1011 aa16.15■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Grin2bQ01097 1482 aa16.15■□□□□ 0.18
Col3a1-201ENSMUST00000087883 4921504E06RikQ8CET2 560 aa16.15■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Vps37dQ810I0 261 aa16.15■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Tshz3Q8CGV9 1081 aa16.15■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Arhgap31A6X8Z5 1425 aa16.15■□□□□ 0.18
Col3a1-201ENSMUST00000087883 Usp25P57080 1055 aa16.15■□□□□ 0.18
Col3a1-201ENSMUST00000087883 4930572O03RikQ8C5Y0 211 aa16.14■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Klhl10Q9D5V2 608 aa16.14■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Mum1Q6DID5 682 aa16.14■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Ctnnbl1Q9CWL8 563 aaKnown RBP16.14■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Map3k1P53349 1493 aa16.14■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Spata24Q6P926 205 aa16.14■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Duox2A2AQ99 1517 aa16.14■□□□□ 0.17
Col3a1-201ENSMUST00000087883 IqcgQ80W32 419 aa16.14■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Iffo1Q8BXL9 562 aa16.14■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Smco2Q9DA21 347 aa16.14■□□□□ 0.17
Col3a1-201ENSMUST00000087883 NapbP28663 298 aa16.13■□□□□ 0.17
Col3a1-201ENSMUST00000087883 GpkowQ56A08 488 aa16.13■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Q4VA45 678 aa16.13■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Fam107bQ3TGF2 131 aa16.13■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Tbc1d32Q3URV1 1296 aa16.13■□□□□ 0.17
Col3a1-201ENSMUST00000087883 TnikP83510 1323 aa16.13■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Bms1Q6PGF5 1284 aaKnown RBP16.13■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Mcm6P97311 821 aa16.13■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Q3UPC7 1272 aa16.13■□□□□ 0.17
Col3a1-201ENSMUST00000087883 Fam177a1Q8BR63 207 aa16.13■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms