RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Cyp2d12Q8BVD2 504 aa11.41□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Efcab2Q9CQ46 164 aa11.41□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Gm6268A2A3U9 297 aa11.4□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Chpf2Q3UU43 768 aa11.4□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Nsd3Q6P2L6 1439 aa11.4□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Nav1Q8CH77 1875 aa11.4□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Kndc1Q0KK55 1742 aa11.4□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Ppfibp2O35711 882 aa11.4□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Lrit1Q8K099 624 aa11.4□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Irx6Q9ER75 438 aa11.4□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Sugp2Q8CH09 1067 aa11.39□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 KarsQ99MN1 595 aaKnown RBP11.39□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Rps6ka4Q9Z2B9 773 aa11.39□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Tnnt1O88346 262 aa11.39□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Rwdd1Q9CQK7 243 aa11.39□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Col22a1E9Q7P1 1613 aa11.38□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Iqsec3Q3TES0 1195 aa11.38□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Atg3Q9CPX6 314 aa11.38□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 TefQ9JLC6 301 aa11.38□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 G3bp1P97855 465 aaKnown RBP11.38□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Kiaa0319Q5SZV5 1081 aa11.38□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Jmjd4Q8BFT6 427 aa11.38□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Afg3l2Q8JZQ2 802 aaKnown RBP11.38□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Klc3Q91W40 508 aa11.38□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 GckrQ91X44 587 aa11.38□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Ubap1lG3UW59 384 aa11.37□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Smg7Q5RJH6 1138 aaKnown RBP11.37□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Cavin2Q63918 418 aaKnown RBP11.37□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Cap2Q9CYT6 476 aa11.37□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 PigbQ9JJQ0 542 aa11.37□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Sos2Q02384 1333 aa11.37□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 PsapQ61207 557 aaKnown RBP11.37□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Plekhm2Q80TQ5 1018 aa11.37□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Tmem119Q8R138 280 aa11.37□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Taf7Q9R1C0 341 aa11.37□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Arhgap33Q80YF9 1305 aa11.36□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Chl1P70232 1209 aa11.36□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Dcaf5Q80T85 946 aa11.36□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Adcy9P51830 1353 aa11.36□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Fkbp4P30416 458 aa11.35□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Cnnm1Q0GA42 951 aa11.35□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 GalcP54818 684 aa11.35□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 MpndQ3TV65 487 aa11.35□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Flad1Q8R123 492 aa11.35□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Pdia6Q922R8 440 aaKnown RBP11.35□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Cnksr1A2A9K7 700 aa11.34□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Mylk2Q8VCR8 613 aa11.34□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Apbb1Q9QXJ1 710 aa11.34□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Tnnt3Q9QZ47 272 aa11.34□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Bcl2l13P59017 434 aa11.34□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Cers3Q1A3B0 383 aa11.34□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Tmco5bQ80X59 307 aa11.34□□□□□ -0.59
Ccdc28a-201ENSMUST00000052648 Ric1Q69ZJ7 1422 aa11.33□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Pde4dQ01063 747 aa11.33□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Morc2aQ69ZX6 1030 aa11.33□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 SympkQ80X82 1284 aa11.33□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Kiaa0319lQ8K135 1048 aa11.33□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Adamtsl1Q8BLI0 1745 aa11.33□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Nectin2P32507 530 aa11.33□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Prkab2Q6PAM0 271 aa11.33□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Sv2bQ8BG39 683 aa11.33□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Rangap1P46061 589 aaKnown RBP11.32□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 MarsQ68FL6 902 aaKnown RBP11.32□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Fam83gQ5SWY7 812 aa11.32□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Trim58Q5NCC9 485 aa11.31□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 CoilQ5SU73 570 aa11.31□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Col4a1P02463 1669 aa11.31□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 C4bP01029 1738 aa11.31□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Vars2Q3U2A8 1060 aa11.3□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Erbb4Q61527 1308 aa11.3□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Sipa1l3G3X9J0 1776 aa11.3□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Aplp1Q03157 653 aa11.3□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Q3UPC7 1272 aa11.3□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Aldh1l1Q8R0Y6 902 aa11.3□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Syde2E9PUP1 1314 aa11.3□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Gm12185Q5NCB2 835 aa11.29□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 MetP16056 1379 aa11.29□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Bicdl1A0JNT9 577 aa11.29□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Slc39a6Q8C145 765 aa11.29□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Aifm3Q3TY86 605 aa11.28□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Ric3Q8BPM6 367 aa11.28□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 DiexfQ8BTT6 772 aaKnown RBP11.28□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Pank1Q8K4K6 548 aa11.28□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Flt4P35917 1363 aa11.28□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Disp3A3KFU9 1347 aa11.28□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Snapc4Q8BP86 1333 aa11.28□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Q8BT18 775 aa11.28□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Trim52Q8CDV4 233 aa11.28□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Echdc1Q9D9V3 322 aa11.28□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Ddx60E9PZQ1 1711 aa11.28□□□□□ -0.6
Ccdc28a-201ENSMUST00000052648 Cyp2d11P24457 504 aa11.27□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Hmgb2P30681 210 aaKnown RBP11.27□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Clcn1Q64347 994 aa11.27□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Ankrd13dQ6PD24 605 aa11.27□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Znf330Q922H9 316 aa11.27□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Rgs17Q9QZB0 210 aa11.27□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Lama4P97927 1816 aa11.27□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 CoblQ5NBX1 1337 aaKnown RBP11.27□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Ccdc6D3YZP9 469 aa11.26□□□□□ -0.61
Ccdc28a-201ENSMUST00000052648 Miga2Q8BK03 593 aa11.26□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 8.2 ms