RNA–Protein interactions for RNA: ENSMUST00000042534.14

Ccdc85a-201, Transcript of Coiled-coil domain-containing protein 85A, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc85a, Length 5,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85a-201ENSMUST00000042534 Ncoa3O09000 1398 aa16.43■□□□□ 0.22
Ccdc85a-201ENSMUST00000042534 Sf3b2Q3UJB0 878 aaKnown RBP16.42■□□□□ 0.22
Ccdc85a-201ENSMUST00000042534 Igbp1bQ9QZ29 343 aa16.42■□□□□ 0.22
Ccdc85a-201ENSMUST00000042534 Iqca1Q9CUL5 857 aa16.42■□□□□ 0.22
Ccdc85a-201ENSMUST00000042534 Rrs1Q9CYH6 365 aaKnown RBP16.42■□□□□ 0.22
Ccdc85a-201ENSMUST00000042534 Bcar3Q9QZK2 820 aa16.42■□□□□ 0.22
Ccdc85a-201ENSMUST00000042534 BC005561E9Q5E2 1589 aa16.41■□□□□ 0.22
Ccdc85a-201ENSMUST00000042534 Lrrc45Q8CIM1 670 aa16.41■□□□□ 0.22
Ccdc85a-201ENSMUST00000042534 Rbm27Q5SFM8 1060 aaKnown RBP16.41■□□□□ 0.22
Ccdc85a-201ENSMUST00000042534 Limch1Q3UH68 1057 aa16.41■□□□□ 0.22
Ccdc85a-201ENSMUST00000042534 Trim11Q99PQ2 467 aa16.41■□□□□ 0.22
Ccdc85a-201ENSMUST00000042534 Rasa1E9PYG6 1038 aa16.41■□□□□ 0.22
Ccdc85a-201ENSMUST00000042534 Map9Q3TRR0 646 aa16.41■□□□□ 0.22
Ccdc85a-201ENSMUST00000042534 Liat1Q810M6 228 aa16.41■□□□□ 0.22
Ccdc85a-201ENSMUST00000042534 Cep55Q8BT07 462 aa16.41■□□□□ 0.22
Ccdc85a-201ENSMUST00000042534 Ppip5k1A2ARP1 1436 aa16.41■□□□□ 0.22
Ccdc85a-201ENSMUST00000042534 Slc13a4Q8BZ82 625 aa16.4■□□□□ 0.22
Ccdc85a-201ENSMUST00000042534 Ddx58Q6Q899 926 aa16.4■□□□□ 0.22
Ccdc85a-201ENSMUST00000042534 Zeb2Q9R0G7 1215 aa16.4■□□□□ 0.22
Ccdc85a-201ENSMUST00000042534 Dnajc2P54103 621 aaKnown RBP16.4■□□□□ 0.22
Ccdc85a-201ENSMUST00000042534 Abcf1Q6P542 837 aaKnown RBP16.4■□□□□ 0.22
Ccdc85a-201ENSMUST00000042534 Ankib1Q6ZPS6 1085 aa16.4■□□□□ 0.22
Ccdc85a-201ENSMUST00000042534 LlphQ9D945 130 aaKnown RBP16.4■□□□□ 0.22
Ccdc85a-201ENSMUST00000042534 Mapkbp1Q6NS57 1503 aa16.4■□□□□ 0.22
Ccdc85a-201ENSMUST00000042534 GpkowQ56A08 488 aa16.39■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 4931400O07RikQ9D4M5 137 aa16.39■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 InsrP15208 1372 aa16.39■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Duxf3A0A0N4SV92 674 aa16.39■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 EvcP57680 1005 aa16.39■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Pafah1b1P63005 410 aaKnown RBP16.39■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Tmem87bQ8BKU8 555 aa16.39■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Chrna2Q91X60 512 aa16.39■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Cep89Q9CZX2 791 aa16.39■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Stx6Q9JKK1 255 aa16.39■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Mctp2Q5RJH2 878 aa16.39■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 CenphQ9QYM8 241 aa16.39■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Cfap69Q8BH53 942 aa16.39■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Nlrp3Q8R4B8 1033 aa16.39■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Brms1Q99N20 246 aa16.39■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Mybbp1aQ7TPV4 1344 aaKnown RBP16.38■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 LifrP42703 1092 aa16.38■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Frmd3Q8BHD4 595 aa16.38■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Stxbp4Q9WV89 557 aa16.38■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Ube2hP62257 183 aa16.38■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Mrvi1Q9WUX5 899 aaKnown RBP16.38■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Ccdc150Q8CDI7 1110 aa16.38■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Gps2Q921N8 327 aa16.38■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Hmg20bQ9Z104 317 aa16.38■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Ankrd1Q9CR42 319 aa16.37■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 CalrP14211 416 aaKnown RBP16.37■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Gas2l3Q3UWW6 683 aa16.37■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Mcm3P25206 812 aaKnown RBP16.37■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Ccne1Q61457 408 aa16.37■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Zkscan7E9PVW1 718 aa16.37■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Irf9Q61179 399 aa16.37■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Ccdc178Q8CDV0 866 aa16.37■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Atf7Q8R0S1 413 aa16.36■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Ddx54Q8K4L0 874 aaKnown RBP16.36■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 KdrP35918 1367 aa16.35■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Tmc2Q8R4P4 888 aa16.35■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 ApobrQ8VBT6 942 aa16.35■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Gm10093D3YYI8 482 aa16.35■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Gm10563F6WIE4 79 aa16.35■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Hdac1O09106 482 aaKnown RBP16.35■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Stx1aO35526 288 aa16.35■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Cavin2Q63918 418 aaKnown RBP16.35■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Bms1Q6PGF5 1284 aaKnown RBP16.35■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Ccdc172Q810N9 267 aa16.35■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Mrps27Q8BK72 415 aaKnown RBP16.35■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Polr3dQ91WD1 398 aa16.35■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Tmem67Q8BR76 992 aa16.34■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Luzp1Q8R4U7 1068 aaKnown RBP16.34■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Cpsf1Q9EPU4 1441 aaKnown RBP16.34■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Chpf2Q3UU43 768 aa16.34■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Echdc1Q9D9V3 322 aa16.34■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Bloc1s2Q9CWG9 143 aa16.34■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 NgdnQ9DB96 315 aaKnown RBP16.34■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Kdm5bQ80Y84 1544 aa16.34■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Ccdc191J3QQ27 883 aa16.33■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Nap1l2P51860 460 aa16.33■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Adcy5P84309 1262 aa16.33■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Gse1Q3U3C9 1213 aa16.33■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 NapbP28663 298 aa16.33■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 CenppQ9CZ92 286 aa16.33■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Znf287Q9EQB9 759 aa16.33■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Fam50bQ9WTJ8 334 aa16.33■□□□□ 0.21
Ccdc85a-201ENSMUST00000042534 Hdgfl1Q2VPR5 283 aa16.33■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Ell2Q3UKU1 639 aa16.33■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Nol11Q8BJW5 723 aaKnown RBP16.33■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 IkQ9Z1M8 557 aaKnown RBP16.33■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Ppfia1B2RXQ2 1266 aa16.33■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 LyarQ08288 388 aaKnown RBP16.33■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Trim27Q62158 513 aa16.33■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Pde4bB1AWC9 736 aa16.32■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Gnat3Q3V3I2 354 aa16.32■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Rsph6aQ8CDR2 708 aa16.32■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Ccdc66Q6NS45 935 aa16.32■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Mtmr3Q8K296 1196 aa16.32■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Nap1l5Q9JJF0 156 aa16.32■□□□□ 0.2
Ccdc85a-201ENSMUST00000042534 Aldh8a1Q8BH00 487 aa16.32■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 90.9 ms