RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Tnks1bp1P58871 1720 aa28,75■■■□□ 2,19
Cln6-201ENSMUST00000034776 Cgnl1Q6AW69 1298 aa28,75■■■□□ 2,19
Cln6-201ENSMUST00000034776 Slit1Q80TR4 1531 aa28,74■■■□□ 2,19
Cln6-201ENSMUST00000034776 Cyp2d11P24457 504 aa28,74■■■□□ 2,19
Cln6-201ENSMUST00000034776 Wdr63B2RY71 923 aa28,73■■■□□ 2,19
Cln6-201ENSMUST00000034776 Eif2s2Q99L45 331 aaKnown RBP28,73■■■□□ 2,19
Cln6-201ENSMUST00000034776 Atp10bB1AWN4 1474 aa28,73■■■□□ 2,19
Cln6-201ENSMUST00000034776 Cadps2Q8BYR5 1297 aa28,72■■■□□ 2,19
Cln6-201ENSMUST00000034776 Tns2Q8CGB6 1400 aa28,72■■■□□ 2,19
Cln6-201ENSMUST00000034776 Ccdc27Q3V036 639 aa28,71■■■□□ 2,19
Cln6-201ENSMUST00000034776 Zranb3Q6NZP1 1069 aa28,71■■■□□ 2,19
Cln6-201ENSMUST00000034776 FanclQ9CR14 375 aa28,7■■■□□ 2,19
Cln6-201ENSMUST00000034776 Gcc1Q9D4H2 778 aa28,7■■■□□ 2,19
Cln6-201ENSMUST00000034776 RgmbQ7TQ33 436 aa28,7■■■□□ 2,18
Cln6-201ENSMUST00000034776 Phkg2Q9DB30 406 aa28,7■■■□□ 2,18
Cln6-201ENSMUST00000034776 Gnai2P08752 355 aaKnown RBP28,69■■■□□ 2,18
Cln6-201ENSMUST00000034776 Ppp1r9bQ6R891 817 aaKnown RBP28,69■■■□□ 2,18
Cln6-201ENSMUST00000034776 Irx6Q9ER75 438 aa28,68■■■□□ 2,18
Cln6-201ENSMUST00000034776 Stk36Q69ZM6 1316 aa28,67■■■□□ 2,18
Cln6-201ENSMUST00000034776 Tmem119Q8R138 280 aa28,66■■■□□ 2,18
Cln6-201ENSMUST00000034776 Echdc1Q9D9V3 322 aa28,66■■■□□ 2,18
Cln6-201ENSMUST00000034776 Mcm2P97310 904 aa28,66■■■□□ 2,18
Cln6-201ENSMUST00000034776 PsapQ61207 557 aaKnown RBP28,66■■■□□ 2,18
Cln6-201ENSMUST00000034776 Fkbp4P30416 458 aa28,65■■■□□ 2,18
Cln6-201ENSMUST00000034776 Ccdc155Q80VJ8 648 aa28,64■■■□□ 2,18
Cln6-201ENSMUST00000034776 GckrQ91X44 587 aa28,64■■■□□ 2,18
Cln6-201ENSMUST00000034776 Zfp142G5E869 1843 aa28,64■■■□□ 2,18
Cln6-201ENSMUST00000034776 Chmp7Q8R1T1 451 aa28,63■■■□□ 2,17
Cln6-201ENSMUST00000034776 Atg3Q9CPX6 314 aa28,63■■■□□ 2,17
Cln6-201ENSMUST00000034776 Mfap1aC0HKD8 439 aaKnown RBP28,63■■■□□ 2,17
Cln6-201ENSMUST00000034776 Mfap1bC0HKD9 439 aaKnown RBP28,63■■■□□ 2,17
Cln6-201ENSMUST00000034776 Rabep1O35551 862 aa28,61■■■□□ 2,17
Cln6-201ENSMUST00000034776 4930572O03RikQ8C5Y0 211 aa28,61■■■□□ 2,17
Cln6-201ENSMUST00000034776 ZgpatQ8VDM1 511 aa28,61■■■□□ 2,17
Cln6-201ENSMUST00000034776 Sart3Q9JLI8 962 aaKnown RBP28,61■■■□□ 2,17
Cln6-201ENSMUST00000034776 Txnrd1Q9JMH6 613 aa28,61■■■□□ 2,17
Cln6-201ENSMUST00000034776 ScaperF8VQ70 1398 aaKnown RBP28,61■■■□□ 2,17
Cln6-201ENSMUST00000034776 Atp8b2P98199 1209 aa28,61■■■□□ 2,17
Cln6-201ENSMUST00000034776 Taf7Q9R1C0 341 aa28,61■■■□□ 2,17
Cln6-201ENSMUST00000034776 Fam50bQ9WTJ8 334 aa28,61■■■□□ 2,17
Cln6-201ENSMUST00000034776 Ubr2Q6WKZ8 1755 aa28,6■■■□□ 2,17
Cln6-201ENSMUST00000034776 Atg4a-psA0A0G2JFS9 396 aa28,6■■■□□ 2,17
Cln6-201ENSMUST00000034776 Plekhd1B2RPU2 505 aa28,6■■■□□ 2,17
Cln6-201ENSMUST00000034776 Ccdc146E9Q9F7 977 aa28,6■■■□□ 2,17
Cln6-201ENSMUST00000034776 Atg4aQ8C9S8 396 aa28,6■■■□□ 2,17
Cln6-201ENSMUST00000034776 HdgfP51859 237 aaKnown RBP28,59■■■□□ 2,17
Cln6-201ENSMUST00000034776 Ppp1r42Q8R1Z4 357 aa28,59■■■□□ 2,17
Cln6-201ENSMUST00000034776 Ssfa2Q922B9 1252 aa28,59■■■□□ 2,17
Cln6-201ENSMUST00000034776 Cc2d1aQ8K1A6 943 aa28,58■■■□□ 2,17
Cln6-201ENSMUST00000034776 Smarca5Q91ZW3 1051 aaKnown RBP28,58■■■□□ 2,17
Cln6-201ENSMUST00000034776 Bend3Q6PAL0 825 aa28,58■■■□□ 2,17
Cln6-201ENSMUST00000034776 Slx1bQ8BX32 270 aa28,58■■■□□ 2,17
Cln6-201ENSMUST00000034776 Srgap3Q812A2 1099 aa28,57■■■□□ 2,16
Cln6-201ENSMUST00000034776 Sptbn5F6UCX4 1208 aa28,57■■■□□ 2,16
Cln6-201ENSMUST00000034776 Adcy9P51830 1353 aa28,56■■■□□ 2,16
Cln6-201ENSMUST00000034776 Asic4Q7TNS7 539 aa28,56■■■□□ 2,16
Cln6-201ENSMUST00000034776 Kif2cQ922S8 721 aa28,55■■■□□ 2,16
Cln6-201ENSMUST00000034776 Nphp1Q9QY53 687 aa28,55■■■□□ 2,16
Cln6-201ENSMUST00000034776 Mmp8O70138 465 aa28,55■■■□□ 2,16
Cln6-201ENSMUST00000034776 Iqsec3Q3TES0 1195 aa28,55■■■□□ 2,16
Cln6-201ENSMUST00000034776 Tbc1d9Q3UYK3 1264 aa28,55■■■□□ 2,16
Cln6-201ENSMUST00000034776 SympkQ80X82 1284 aa28,55■■■□□ 2,16
Cln6-201ENSMUST00000034776 Pdia6Q922R8 440 aaKnown RBP28,55■■■□□ 2,16
Cln6-201ENSMUST00000034776 Cdhr2E9Q7P9 1308 aa28,54■■■□□ 2,16
Cln6-201ENSMUST00000034776 Mre11Q61216 706 aa28,54■■■□□ 2,16
Cln6-201ENSMUST00000034776 CenppQ9CZ92 286 aa28,54■■■□□ 2,16
Cln6-201ENSMUST00000034776 Bcl2l13P59017 434 aa28,54■■■□□ 2,16
Cln6-201ENSMUST00000034776 Zpr1Q62384 459 aa28,54■■■□□ 2,16
Cln6-201ENSMUST00000034776 Nek4Q9Z1J2 792 aa28,54■■■□□ 2,16
Cln6-201ENSMUST00000034776 Flt4P35917 1363 aa28,53■■■□□ 2,16
Cln6-201ENSMUST00000034776 Eif3bQ8JZQ9 803 aaKnown RBP28,52■■■□□ 2,16
Cln6-201ENSMUST00000034776 Zap70P43404 618 aa28,51■■■□□ 2,15
Cln6-201ENSMUST00000034776 Cwc27Q3TKY6 469 aa28,51■■■□□ 2,15
Cln6-201ENSMUST00000034776 Tnpo1Q8BFY9 898 aaKnown RBP28,51■■■□□ 2,15
Cln6-201ENSMUST00000034776 Exoc6bA6H5Z3 810 aa28,5■■■□□ 2,15
Cln6-201ENSMUST00000034776 Cyp46a1Q9WVK8 500 aa28,5■■■□□ 2,15
Cln6-201ENSMUST00000034776 Morc2aQ69ZX6 1030 aa28,49■■■□□ 2,15
Cln6-201ENSMUST00000034776 Anapc15-psA0A140T8L6 141 aa28,48■■■□□ 2,15
Cln6-201ENSMUST00000034776 Acsbg1Q99PU5 721 aa28,48■■■□□ 2,15
Cln6-201ENSMUST00000034776 Map3k2Q61083 619 aa28,48■■■□□ 2,15
Cln6-201ENSMUST00000034776 Mcmdc2E9Q956 681 aa28,47■■■□□ 2,15
Cln6-201ENSMUST00000034776 Irf9Q61179 399 aa28,47■■■□□ 2,15
Cln6-201ENSMUST00000034776 Larp1Q6ZQ58 1072 aaKnown RBP28,47■■■□□ 2,15
Cln6-201ENSMUST00000034776 Ier5O89113 308 aa28,46■■■□□ 2,15
Cln6-201ENSMUST00000034776 HellsQ60848 821 aa28,46■■■□□ 2,15
Cln6-201ENSMUST00000034776 Mphosph10Q810V0 681 aaKnown RBP28,46■■■□□ 2,15
Cln6-201ENSMUST00000034776 Speer4bQ9D9F7 267 aa28,45■■■□□ 2,15
Cln6-201ENSMUST00000034776 TefQ9JLC6 301 aa28,45■■■□□ 2,15
Cln6-201ENSMUST00000034776 Marf1Q8BJ34 1730 aaKnown RBP28,45■■■□□ 2,14
Cln6-201ENSMUST00000034776 Cfdp1O88271 295 aaKnown RBP28,45■■■□□ 2,14
Cln6-201ENSMUST00000034776 Pard3Q99NH2 1333 aa28,43■■■□□ 2,14
Cln6-201ENSMUST00000034776 Slc5a1Q8C3K6 665 aa28,43■■■□□ 2,14
Cln6-201ENSMUST00000034776 Gm10093D3YYI8 482 aa28,42■■■□□ 2,14
Cln6-201ENSMUST00000034776 Hdac1O09106 482 aaKnown RBP28,42■■■□□ 2,14
Cln6-201ENSMUST00000034776 Tjp1P39447 1745 aaKnown RBP28,42■■■□□ 2,14
Cln6-201ENSMUST00000034776 Gm21663A0A0G2JE01 267 aa28,42■■■□□ 2,14
Cln6-201ENSMUST00000034776 Gm7361D3Z6R1 267 aa28,42■■■□□ 2,14
Cln6-201ENSMUST00000034776 5031410I06RikE9Q4E0 267 aa28,42■■■□□ 2,14
Cln6-201ENSMUST00000034776 Gm1979E9QAN3 267 aa28,42■■■□□ 2,14
Cln6-201ENSMUST00000034776 Gm5862K7N5V5 267 aa28,42■■■□□ 2,14
Retrieved 100 of 22,080 RNA–protein pairs in 15,8 ms