RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 ItpripQ3TNL8 555 aa12.68□□□□□ -0.38
Ciita-201ENSMUST00000023147 Dnaaf4Q8R368 420 aa12.68□□□□□ -0.38
Ciita-201ENSMUST00000023147 Sytl4Q9R0Q1 673 aa12.68□□□□□ -0.38
Ciita-201ENSMUST00000023147 Kcnj4P52189 445 aa12.68□□□□□ -0.38
Ciita-201ENSMUST00000023147 Q3UPC7 1272 aa12.68□□□□□ -0.38
Ciita-201ENSMUST00000023147 Stard3nlQ9DCI3 235 aa12.68□□□□□ -0.38
Ciita-201ENSMUST00000023147 Cdc42bpaQ3UU96 1719 aa12.68□□□□□ -0.38
Ciita-201ENSMUST00000023147 Dot1lQ6XZL8 1540 aa12.68□□□□□ -0.38
Ciita-201ENSMUST00000023147 Strn4P58404 760 aa12.68□□□□□ -0.38
Ciita-201ENSMUST00000023147 StambpQ9CQ26 424 aa12.68□□□□□ -0.38
Ciita-201ENSMUST00000023147 Cavin1O54724 392 aa12.68□□□□□ -0.38
Ciita-201ENSMUST00000023147 Clcn1Q64347 994 aa12.68□□□□□ -0.38
Ciita-201ENSMUST00000023147 Nphp4P59240 1425 aa12.67□□□□□ -0.38
Ciita-201ENSMUST00000023147 CenppQ9CZ92 286 aa12.67□□□□□ -0.38
Ciita-201ENSMUST00000023147 Ddx23D3Z0M9 819 aaKnown RBP12.67□□□□□ -0.38
Ciita-201ENSMUST00000023147 Znf692Q3U381 531 aa12.67□□□□□ -0.38
Ciita-201ENSMUST00000023147 Kdm4cQ8VCD7 1054 aa12.67□□□□□ -0.38
Ciita-201ENSMUST00000023147 Themis2Q91YX0 663 aa12.67□□□□□ -0.38
Ciita-201ENSMUST00000023147 KdrP35918 1367 aa12.67□□□□□ -0.38
Ciita-201ENSMUST00000023147 Bag1Q60739 355 aa12.67□□□□□ -0.38
Ciita-201ENSMUST00000023147 PsapQ61207 557 aaKnown RBP12.67□□□□□ -0.38
Ciita-201ENSMUST00000023147 Nup88Q8CEC0 753 aaKnown RBP12.67□□□□□ -0.38
Ciita-201ENSMUST00000023147 Trim55G3X8Y1 545 aa12.67□□□□□ -0.38
Ciita-201ENSMUST00000023147 Washc4Q3UMB9 1173 aa12.67□□□□□ -0.38
Ciita-201ENSMUST00000023147 Aldh8a1Q8BH00 487 aa12.67□□□□□ -0.38
Ciita-201ENSMUST00000023147 Cdk19Q8BWD8 501 aa12.67□□□□□ -0.38
Ciita-201ENSMUST00000023147 Cavin2Q63918 418 aaKnown RBP12.66□□□□□ -0.38
Ciita-201ENSMUST00000023147 Abcc2Q8VI47 1543 aa12.66□□□□□ -0.38
Ciita-201ENSMUST00000023147 Mrps27Q8BK72 415 aaKnown RBP12.66□□□□□ -0.38
Ciita-201ENSMUST00000023147 Trpm2Q91YD4 1506 aa12.66□□□□□ -0.38
Ciita-201ENSMUST00000023147 Ptpdc1Q6NZK8 747 aa12.66□□□□□ -0.38
Ciita-201ENSMUST00000023147 Nol12Q8BG17 217 aa12.66□□□□□ -0.38
Ciita-201ENSMUST00000023147 Jakmip1Q8BVL9 626 aa12.66□□□□□ -0.38
Ciita-201ENSMUST00000023147 BbxQ8VBW5 907 aa12.66□□□□□ -0.38
Ciita-201ENSMUST00000023147 Pmfbp1Q9WVQ0 1022 aa12.66□□□□□ -0.38
Ciita-201ENSMUST00000023147 Homer1Q9Z2Y3 366 aa12.66□□□□□ -0.38
Ciita-201ENSMUST00000023147 Setd1aE9PYH6 1716 aa12.66□□□□□ -0.38
Ciita-201ENSMUST00000023147 Gm10471E9Q1C7 252 aa12.66□□□□□ -0.38
Ciita-201ENSMUST00000023147 Pafah1b1P63005 410 aaKnown RBP12.66□□□□□ -0.38
Ciita-201ENSMUST00000023147 Mphosph10Q810V0 681 aaKnown RBP12.66□□□□□ -0.38
Ciita-201ENSMUST00000023147 Edc4Q3UJB9 1406 aaKnown RBP12.65□□□□□ -0.38
Ciita-201ENSMUST00000023147 Arglu1Q3UL36 271 aaKnown RBP12.65□□□□□ -0.38
Ciita-201ENSMUST00000023147 TnmdQ9EP64 317 aa12.65□□□□□ -0.38
Ciita-201ENSMUST00000023147 TefQ9JLC6 301 aa12.65□□□□□ -0.38
Ciita-201ENSMUST00000023147 Cyp26c1B2RXA7 518 aa12.65□□□□□ -0.38
Ciita-201ENSMUST00000023147 Cabp2Q9JLK4 216 aa12.65□□□□□ -0.38
Ciita-201ENSMUST00000023147 Myom2Q14BI5 1463 aa12.65□□□□□ -0.38
Ciita-201ENSMUST00000023147 Wdr33Q8K4P0 1330 aaKnown RBP12.65□□□□□ -0.38
Ciita-201ENSMUST00000023147 Plch2A2AP18 1501 aa12.65□□□□□ -0.38
Ciita-201ENSMUST00000023147 Elp1Q7TT37 1333 aaKnown RBP12.65□□□□□ -0.38
Ciita-201ENSMUST00000023147 Ppp6r1Q7TSI3 856 aa12.65□□□□□ -0.39
Ciita-201ENSMUST00000023147 Fmnl2A2APV2 1086 aa12.64□□□□□ -0.39
Ciita-201ENSMUST00000023147 Srgap3Q812A2 1099 aa12.64□□□□□ -0.39
Ciita-201ENSMUST00000023147 Abcd1P48410 736 aa12.64□□□□□ -0.39
Ciita-201ENSMUST00000023147 Otud6bQ8K2H2 294 aa12.64□□□□□ -0.39
Ciita-201ENSMUST00000023147 Krt85Q9Z2T6 507 aa12.64□□□□□ -0.39
Ciita-201ENSMUST00000023147 Adck5Q80V03 582 aa12.64□□□□□ -0.39
Ciita-201ENSMUST00000023147 Tmx3Q8BXZ1 456 aa12.64□□□□□ -0.39
Ciita-201ENSMUST00000023147 Ssr1Q9CY50 286 aaKnown RBP12.64□□□□□ -0.39
Ciita-201ENSMUST00000023147 LlphQ9D945 130 aaKnown RBP12.64□□□□□ -0.39
Ciita-201ENSMUST00000023147 Stxbp4Q9WV89 557 aa12.64□□□□□ -0.39
Ciita-201ENSMUST00000023147 Cep57l1Q8VDS7 400 aa12.64□□□□□ -0.39
Ciita-201ENSMUST00000023147 Cfap45Q9D9U9 551 aa12.64□□□□□ -0.39
Ciita-201ENSMUST00000023147 CenpqQ9CPQ5 267 aa12.63□□□□□ -0.39
Ciita-201ENSMUST00000023147 Eif5P59325 429 aaKnown RBP12.63□□□□□ -0.39
Ciita-201ENSMUST00000023147 Skint5A7XUY5 1461 aa12.63□□□□□ -0.39
Ciita-201ENSMUST00000023147 Tspyl3Q3UYP3 334 aa12.63□□□□□ -0.39
Ciita-201ENSMUST00000023147 HypkQ9CR41 129 aa12.63□□□□□ -0.39
Ciita-201ENSMUST00000023147 Lrrfip1Q3UZ39 729 aaKnown RBP12.62□□□□□ -0.39
Ciita-201ENSMUST00000023147 Ripply1Q2WG77 201 aa12.62□□□□□ -0.39
Ciita-201ENSMUST00000023147 Zranb3Q6NZP1 1069 aa12.62□□□□□ -0.39
Ciita-201ENSMUST00000023147 TimelessQ9R1X4 1197 aa12.62□□□□□ -0.39
Ciita-201ENSMUST00000023147 Rhot2Q8JZN7 620 aa12.62□□□□□ -0.39
Ciita-201ENSMUST00000023147 Ccdc191J3QQ27 883 aa12.62□□□□□ -0.39
Ciita-201ENSMUST00000023147 Il4rP16382 810 aa12.62□□□□□ -0.39
Ciita-201ENSMUST00000023147 Nucb2P81117 420 aa12.62□□□□□ -0.39
Ciita-201ENSMUST00000023147 Neurl4Q5NCX5 1563 aa12.61□□□□□ -0.39
Ciita-201ENSMUST00000023147 Prpf4bQ61136 1007 aaKnown RBP12.61□□□□□ -0.39
Ciita-201ENSMUST00000023147 Cep131Q62036 1060 aa12.61□□□□□ -0.39
Ciita-201ENSMUST00000023147 Lmbr1Q9JIT0 490 aa12.61□□□□□ -0.39
Ciita-201ENSMUST00000023147 Lrriq1Q0P5X1 1673 aa12.61□□□□□ -0.39
Ciita-201ENSMUST00000023147 Cct4P80315 539 aaKnown RBP12.61□□□□□ -0.39
Ciita-201ENSMUST00000023147 Trim27Q62158 513 aa12.61□□□□□ -0.39
Ciita-201ENSMUST00000023147 Top1mtQ8R4U6 593 aa12.61□□□□□ -0.39
Ciita-201ENSMUST00000023147 Rlbp1Q9Z275 317 aa12.61□□□□□ -0.39
Ciita-201ENSMUST00000023147 Cfap58B2RW38 873 aa12.61□□□□□ -0.39
Ciita-201ENSMUST00000023147 Bcl2l13P59017 434 aa12.61□□□□□ -0.39
Ciita-201ENSMUST00000023147 Ccdc181Q80ZU5 509 aa12.61□□□□□ -0.39
Ciita-201ENSMUST00000023147 PalldQ9ET54 1408 aa12.61□□□□□ -0.39
Ciita-201ENSMUST00000023147 Trim30cD3YVI9 513 aa12.61□□□□□ -0.39
Ciita-201ENSMUST00000023147 Prkar2bP31324 416 aa12.61□□□□□ -0.39
Ciita-201ENSMUST00000023147 Cdkl5Q3UTQ8 938 aa12.61□□□□□ -0.39
Ciita-201ENSMUST00000023147 L1td1Q587J6 782 aaKnown RBP12.61□□□□□ -0.39
Ciita-201ENSMUST00000023147 Samm50Q8BGH2 469 aa12.61□□□□□ -0.39
Ciita-201ENSMUST00000023147 Pik3r4Q8VD65 1358 aa12.6□□□□□ -0.39
Ciita-201ENSMUST00000023147 Cnnm3Q32NY4 713 aa12.6□□□□□ -0.39
Ciita-201ENSMUST00000023147 Kdm4aQ8BW72 1064 aa12.6□□□□□ -0.39
Ciita-201ENSMUST00000023147 Fbln2P37889 1221 aa12.6□□□□□ -0.39
Ciita-201ENSMUST00000023147 Ube2hP62257 183 aa12.6□□□□□ -0.39
Ciita-201ENSMUST00000023147 Aldh1l2Q8K009 923 aa12.6□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms