RNA–Protein interactions for RNA: ENSMUST00000021864.7

Ssr1-201, Transcript of Translocon-associated protein subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr1, Length 9,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-201ENSMUST00000021864 Erich4Q3UNU4 136 aa9.69□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Ccne1Q61457 408 aa9.69□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Fsd2Q8BZ52 692 aa9.69□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Yeats2Q3TUF7 1407 aa9.69□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Efcab6Q6P1E8 1516 aa9.68□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Ppp1r15aP17564 657 aa9.68□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Col17a1Q07563 1470 aa9.68□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Rufy2Q8R4C2 606 aa9.68□□□□□ -0.86
Ssr1-201ENSMUST00000021864 DesP31001 469 aaKnown RBP9.68□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Eif5P59325 429 aaKnown RBP9.68□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Taok2Q6ZQ29 1240 aa9.68□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Erich3F6QRE9 1637 aa9.68□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Fez1Q8K0X8 392 aa9.68□□□□□ -0.86
Ssr1-201ENSMUST00000021864 StambpQ9CQ26 424 aa9.68□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Fchsd2Q3USJ8 740 aa9.68□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Btbd11Q6GQW0 1109 aa9.68□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Rpgrip1lQ8CG73 1264 aa9.68□□□□□ -0.86
Ssr1-201ENSMUST00000021864 KarsQ99MN1 595 aaKnown RBP9.68□□□□□ -0.86
Ssr1-201ENSMUST00000021864 TnmdQ9EP64 317 aa9.68□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Fndc1E9Q043 1732 aa9.68□□□□□ -0.86
Ssr1-201ENSMUST00000021864 NgdnQ9DB96 315 aaKnown RBP9.67□□□□□ -0.86
Ssr1-201ENSMUST00000021864 PalmQ9Z0P4 383 aa9.67□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Naip5Q9R016 1403 aa9.67□□□□□ -0.86
Ssr1-201ENSMUST00000021864 ImmtQ8CAQ8 757 aaKnown RBP9.67□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Samd1D3YXK1 519 aa9.67□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Ripply1Q2WG77 201 aa9.67□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Pank1Q8K4K6 548 aa9.67□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Fkbp5Q64378 456 aa9.67□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Nutm1Q8BHP2 1126 aa9.67□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Adgrb2Q8CGM1 1561 aa9.67□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Ppp2r3aB2RXC8 1150 aa9.67□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Krt85Q9Z2T6 507 aa9.67□□□□□ -0.86
Ssr1-201ENSMUST00000021864 TmpoQ61033 693 aaKnown RBP9.67□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Lrrc9Q8CDN9 1456 aa9.67□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Fsd1Q7TPM6 496 aa9.66□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Zkscan1Q8BGS3 561 aaKnown RBP9.66□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Hook3Q8BUK6 718 aa9.66□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Cep57l1Q8VDS7 400 aa9.66□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Pik3c2gO70167 1506 aa9.66□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Smtnl1Q99LM3 459 aa9.66□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Prkrip1Q9CWV6 186 aaKnown RBP9.66□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Dnmt1P13864 1620 aaKnown RBP9.66□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Ddb1Q3U1J4 1140 aaKnown RBP9.66□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Srgap3Q812A2 1099 aa9.66□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Themis2Q91YX0 663 aa9.66□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Med4Q9CQA5 270 aa9.66□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Pde4dQ01063 747 aa9.66□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Kcna6Q61923 529 aa9.66□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Spata24Q6P926 205 aa9.66□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Nup133Q8R0G9 1155 aa9.66□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Ccdc183A2AJB1 534 aa9.65□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Nol12Q8BG17 217 aa9.65□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Ccar2Q8VDP4 922 aaKnown RBP9.65□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Rprd2Q6NXI6 1469 aaKnown RBP9.65□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Kdm3bQ6ZPY7 1562 aa9.65□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Plekhg5Q66T02 1073 aa9.65□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Cul5Q9D5V5 780 aa9.65□□□□□ -0.86
Ssr1-201ENSMUST00000021864 CenphQ9QYM8 241 aa9.65□□□□□ -0.86
Ssr1-201ENSMUST00000021864 PrxO55103 1391 aa9.65□□□□□ -0.86
Ssr1-201ENSMUST00000021864 Spg7Q3ULF4 781 aa9.65□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Jakmip2D3YXK0 820 aa9.64□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Spty2d1Q68FG3 682 aa9.64□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Cfap58B2RW38 873 aa9.64□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Tsg101Q61187 391 aa9.64□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Iqca1Q9CUL5 857 aa9.64□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Hoxb7P09024 217 aa9.64□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Gtf3c3Q3TMP1 882 aa9.64□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Cnnm3Q32NY4 713 aa9.64□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Ginm1Q91WR6 327 aa9.64□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Homer1Q9Z2Y3 366 aa9.64□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Cfap65Q3V0B4 1847 aa9.64□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Apaf1O88879 1249 aa9.64□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Cwc27Q3TKY6 469 aa9.63□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Igf2bp2Q5SF07 592 aaKnown RBP9.63□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Knop1Q9Z2Q2 478 aaKnown RBP9.63□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Fermt1P59113 677 aa9.63□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Nphp3Q7TNH6 1325 aa9.63□□□□□ -0.87
Ssr1-201ENSMUST00000021864 TnikP83510 1323 aa9.63□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Tmod2Q9JKK7 351 aa9.63□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Epb41l3Q9WV92 929 aa9.63□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Arhgef1Q61210 920 aaKnown RBP9.62□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Slc7a3P70423 618 aa9.62□□□□□ -0.87
Ssr1-201ENSMUST00000021864 AidaQ8C4Q6 305 aa9.62□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Frat2Q8K025 231 aa9.62□□□□□ -0.87
Ssr1-201ENSMUST00000021864 ItpripQ3TNL8 555 aa9.62□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Uggt2E9Q4X2 1504 aa9.62□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Brms1Q99N20 246 aa9.62□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Dnajc10Q9DC23 793 aa9.62□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Abcc6Q9R1S7 1498 aa9.62□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Strn4P58404 760 aa9.62□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Lamb3Q61087 1168 aa9.62□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Mum1Q6DID5 682 aa9.62□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Sh3d21Q7TSG5 549 aa9.62□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Fam13aQ8BGI4 693 aa9.62□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Dnajc2P54103 621 aaKnown RBP9.62□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Pafah1b1P63005 410 aaKnown RBP9.62□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Cacna2d4Q5RJF7 1116 aa9.62□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Rbm27Q5SFM8 1060 aaKnown RBP9.62□□□□□ -0.87
Ssr1-201ENSMUST00000021864 Rnf214Q8BFU3 668 aaKnown RBP9.62□□□□□ -0.87
Ssr1-201ENSMUST00000021864 InhbeO08717 350 aa9.61□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 88.4 ms