RNA–Protein interactions for RNA: ENST00000514479.1

PPARGC1A-212, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 2

Gene PPARGC1A, Length 324 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-212ENST00000514479 AEBP2Q6ZN18 517 aaPredicted RBP17.5■□□□□ 0.39
PPARGC1A-212ENST00000514479 CHIC1Q5VXU3 224 aa16.7■□□□□ 0.26
PPARGC1A-212ENST00000514479 SENP3Q9H4L4 574 aaPredicted RBP14.96□□□□□ -0.01
PPARGC1A-212ENST00000514479 PHF23Q9BUL5 403 aaPredicted RBP14.74□□□□□ -0.05
PPARGC1A-212ENST00000514479 FOXD1Q16676 465 aa13.9□□□□□ -0.18
PPARGC1A-212ENST00000514479 PLPPR3Q6T4P5 718 aa13.37□□□□□ -0.27
PPARGC1A-212ENST00000514479 MSH5O43196 834 aa13.03□□□□□ -0.32
PPARGC1A-212ENST00000514479 PPP6R1Q9UPN7 881 aa13.02□□□□□ -0.33
PPARGC1A-212ENST00000514479 PIAS4Q8N2W9 510 aaPredicted RBP13□□□□□ -0.33
PPARGC1A-212ENST00000514479 ADRA2BP18089 450 aa12.98□□□□□ -0.33
PPARGC1A-212ENST00000514479 POTEDQ86YR6 584 aa12.6□□□□□ -0.39
PPARGC1A-212ENST00000514479 SCAF1Q9H7N4 1312 aaKnown RBP11.93□□□□□ -0.5
PPARGC1A-212ENST00000514479 MAPK8IP2Q13387 824 aaPredicted RBP11.9□□□□□ -0.5
PPARGC1A-212ENST00000514479 DMRT2Q9Y5R5 561 aa11.87□□□□□ -0.51
PPARGC1A-212ENST00000514479 PPP4R3CPQ6ZMV5 832 aa11.71□□□□□ -0.53
PPARGC1A-212ENST00000514479 CNKSR2Q8WXI2 1034 aa11.49□□□□□ -0.57
PPARGC1A-212ENST00000514479 HOXD11P31277 338 aaPredicted RBP11.46□□□□□ -0.57
PPARGC1A-212ENST00000514479 RNF216Q9NWF9 866 aaPredicted RBP11.39□□□□□ -0.59
PPARGC1A-212ENST00000514479 DCAF8L1A6NGE4 600 aa11.31□□□□□ -0.6
PPARGC1A-212ENST00000514479 NCBP3Q53F19 620 aaKnown RBP11.29□□□□□ -0.6
PPARGC1A-212ENST00000514479 CACNB1Q02641 598 aaPredicted RBP11.11□□□□□ -0.63
PPARGC1A-212ENST00000514479 RNF39Q9H2S5 420 aa11.11□□□□□ -0.63
PPARGC1A-212ENST00000514479 DNAJC5BQ9UF47 199 aa11.11□□□□□ -0.63
PPARGC1A-212ENST00000514479 NPM3O75607 178 aaKnown RBP11.1□□□□□ -0.63
PPARGC1A-212ENST00000514479 C1QBPQ07021 282 aaKnown RBP10.97□□□□□ -0.65
PPARGC1A-212ENST00000514479 KCNA4P22459 653 aa10.92□□□□□ -0.66
PPARGC1A-212ENST00000514479 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.88□□□□□ -0.676e-9■□□□□ 9.2
PPARGC1A-212ENST00000514479 U3KPZ7 1027 aaPredicted RBP10.67□□□□□ -0.7
PPARGC1A-212ENST00000514479 SLC4A2P04920 1241 aa10.59□□□□□ -0.71
PPARGC1A-212ENST00000514479 SPINK5Q9NQ38 1064 aaPredicted RBP10.48□□□□□ -0.73
PPARGC1A-212ENST00000514479 CAPN15O75808 1086 aa10.45□□□□□ -0.74
PPARGC1A-212ENST00000514479 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.42□□□□□ -0.74
PPARGC1A-212ENST00000514479 DSG3P32926 999 aa10.42□□□□□ -0.74
PPARGC1A-212ENST00000514479 APLP2Q06481 763 aa10.42□□□□□ -0.74
PPARGC1A-212ENST00000514479 HNRNPUL2Q1KMD3 747 aaKnown RBP10.42□□□□□ -0.74
PPARGC1A-212ENST00000514479 SAMD1Q6SPF0 538 aaPredicted RBP10.35□□□□□ -0.75
PPARGC1A-212ENST00000514479 SLC4A1APQ9BWU0 796 aaKnown RBP10.33□□□□□ -0.76
PPARGC1A-212ENST00000514479 ZNF219Q9P2Y4 722 aaPredicted RBP10.33□□□□□ -0.76
PPARGC1A-212ENST00000514479 MYCNP04198 464 aaPredicted RBP10.29□□□□□ -0.76
PPARGC1A-212ENST00000514479 TRHP20396 242 aaPredicted RBP10.29□□□□□ -0.76
PPARGC1A-212ENST00000514479 FOXD4L1Q9NU39 408 aa10.2□□□□□ -0.78
PPARGC1A-212ENST00000514479 ABCB7O75027 752 aa10.19□□□□□ -0.78
PPARGC1A-212ENST00000514479 POLA2Q14181 598 aa10.05□□□□□ -0.8
PPARGC1A-212ENST00000514479 ZBTB22O15209 634 aa10.04□□□□□ -0.8
PPARGC1A-212ENST00000514479 ATF5Q9Y2D1 282 aaPredicted RBP10.01□□□□□ -0.81
PPARGC1A-212ENST00000514479 RBM42Q9BTD8 480 aaKnown RBP9.96□□□□□ -0.82
PPARGC1A-212ENST00000514479 ATXN8OSP0DMR3 200 aa9.92□□□□□ -0.82
PPARGC1A-212ENST00000514479 ZBTB12Q9Y330 459 aaPredicted RBP9.9□□□□□ -0.82
PPARGC1A-212ENST00000514479 POTEHQ6S545 545 aa9.88□□□□□ -0.83
PPARGC1A-212ENST00000514479 AKT1S1Q96B36 256 aa9.74□□□□□ -0.85
PPARGC1A-212ENST00000514479 OSCARQ8IYS5 282 aa9.72□□□□□ -0.85
PPARGC1A-212ENST00000514479 CHRDL2Q6WN34 429 aa9.69□□□□□ -0.86
PPARGC1A-212ENST00000514479 FBLN2P98095 1184 aa9.65□□□□□ -0.86
PPARGC1A-212ENST00000514479 REM2Q8IYK8 340 aaPredicted RBP9.63□□□□□ -0.87
PPARGC1A-212ENST00000514479 CSRNP3Q8WYN3 585 aa9.63□□□□□ -0.87
PPARGC1A-212ENST00000514479 SPDYE2BA6NHP3 402 aa9.58□□□□□ -0.88
PPARGC1A-212ENST00000514479 SPDYE6P0CI01 402 aa9.58□□□□□ -0.88
PPARGC1A-212ENST00000514479 SPDYE2Q495Y8 402 aa9.58□□□□□ -0.88
PPARGC1A-212ENST00000514479 MKRN4PQ13434 485 aaPredicted RBP9.56□□□□□ -0.88
PPARGC1A-212ENST00000514479 PITPNM1O00562 1244 aa9.51□□□□□ -0.89
PPARGC1A-212ENST00000514479 EHMT2Q96KQ7 1210 aa9.49□□□□□ -0.89
PPARGC1A-212ENST00000514479 PIP4P2Q8N4L2 257 aa9.47□□□□□ -0.89
PPARGC1A-212ENST00000514479 SSUH2Q9Y2M2 353 aa9.46□□□□□ -0.9
PPARGC1A-212ENST00000514479 ZNF692Q9BU19 519 aaPredicted RBP9.45□□□□□ -0.9
PPARGC1A-212ENST00000514479 FXR2P51116 673 aaKnown RBP eCLIP9.44□□□□□ -0.9
PPARGC1A-212ENST00000514479 SPDYE1Q8NFV5 336 aaPredicted RBP9.39□□□□□ -0.91
PPARGC1A-212ENST00000514479 CLEC11AQ9Y240 323 aa9.33□□□□□ -0.92
PPARGC1A-212ENST00000514479 PABPN1Q86U42 306 aaKnown RBP eCLIP9.31□□□□□ -0.92
PPARGC1A-212ENST00000514479 SP7Q8TDD2 431 aaPredicted RBP9.3□□□□□ -0.92
PPARGC1A-212ENST00000514479 HAX1O00165 279 aa9.27□□□□□ -0.93
PPARGC1A-212ENST00000514479 PRKAR2AP13861 404 aaKnown RBP9.26□□□□□ -0.93
PPARGC1A-212ENST00000514479 PRR29P0C7W0 189 aa9.21□□□□□ -0.94
PPARGC1A-212ENST00000514479 EVX2Q03828 476 aa9.15□□□□□ -0.94
PPARGC1A-212ENST00000514479 SPDYE4A6NLX3 237 aa9.14□□□□□ -0.95
PPARGC1A-212ENST00000514479 CHADLQ6NUI6 762 aa9.14□□□□□ -0.95
PPARGC1A-212ENST00000514479 C19orf67A6NJJ6 358 aa9.13□□□□□ -0.95
PPARGC1A-212ENST00000514479 STAG3Q9UJ98 1225 aa9.09□□□□□ -0.95
PPARGC1A-212ENST00000514479 FARP1Q9Y4F1 1045 aaPredicted RBP9.05□□□□□ -0.96
PPARGC1A-212ENST00000514479 CREBZFQ9NS37 354 aa9□□□□□ -0.97
PPARGC1A-212ENST00000514479 CD44P16070 742 aaKnown RBP8.98□□□□□ -0.97
PPARGC1A-212ENST00000514479 GABBR2O75899 941 aa8.97□□□□□ -0.97
PPARGC1A-212ENST00000514479 PROM2Q8N271 834 aa8.97□□□□□ -0.97
PPARGC1A-212ENST00000514479 CLCN6P51797 869 aa8.92□□□□□ -0.98
PPARGC1A-212ENST00000514479 MNX1P50219 401 aaPredicted RBP8.86□□□□□ -0.99
PPARGC1A-212ENST00000514479 ZNF579Q8NAF0 562 aaKnown RBP8.86□□□□□ -0.99
PPARGC1A-212ENST00000514479 NPM1P06748 294 aaKnown RBP eCLIP8.85□□□□□ -0.99
PPARGC1A-212ENST00000514479 ZRANB1Q9UGI0 708 aa8.85□□□□□ -0.99
PPARGC1A-212ENST00000514479 PAK3O75914 559 aaPredicted RBP8.81□□□□□ -1
PPARGC1A-212ENST00000514479 POTEIP0CG38 1075 aa8.77□□□□□ -1.01
PPARGC1A-212ENST00000514479 DCBLD2Q96PD2 775 aa8.73□□□□□ -1.01
PPARGC1A-212ENST00000514479 GALR2O43603 387 aaPredicted RBP8.72□□□□□ -1.01
PPARGC1A-212ENST00000514479 PLEKHG5O94827 1062 aa8.72□□□□□ -1.01
PPARGC1A-212ENST00000514479 FKBP8Q14318 412 aa8.72□□□□□ -1.01
PPARGC1A-212ENST00000514479 PHF12Q96QT6 1004 aa8.72□□□□□ -1.01
PPARGC1A-212ENST00000514479 LHX8Q68G74 356 aa8.71□□□□□ -1.02
PPARGC1A-212ENST00000514479 MIER1Q8N108 512 aa8.7□□□□□ -1.02
PPARGC1A-212ENST00000514479 TSPYL2Q9H2G4 693 aaPredicted RBP8.65□□□□□ -1.02
PPARGC1A-212ENST00000514479 CCDC61Q9Y6R9 512 aa8.65□□□□□ -1.02
PPARGC1A-212ENST00000514479 PLCD3Q8N3E9 789 aa8.64□□□□□ -1.03
PPARGC1A-212ENST00000514479 MS4A3Q96HJ5 214 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms