Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGA3Q9Y5H0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDHGA3Q9Y5H0 FAM86EP-206ENST00000510506 987 ntBASIC18.24■□□□□ 0.51
PCDHGA3Q9Y5H0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.24■□□□□ 0.51
PCDHGA3Q9Y5H0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHGA3Q9Y5H0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGA3Q9Y5H0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGA3Q9Y5H0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDHGA3Q9Y5H0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGA3Q9Y5H0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA3Q9Y5H0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA3Q9Y5H0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGA3Q9Y5H0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
PCDHGA3Q9Y5H0 FZD10-202ENST00000539839 3282 ntBASIC18.24■□□□□ 0.51
PCDHGA3Q9Y5H0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA3Q9Y5H0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGA3Q9Y5H0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA3Q9Y5H0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA3Q9Y5H0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA3Q9Y5H0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
PCDHGA3Q9Y5H0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGA3Q9Y5H0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHGA3Q9Y5H0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA3Q9Y5H0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGA3Q9Y5H0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHGA3Q9Y5H0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGA3Q9Y5H0 AC009947.2-201ENST00000444014 672 ntBASIC18.23■□□□□ 0.51
PCDHGA3Q9Y5H0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHGA3Q9Y5H0 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHGA3Q9Y5H0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGA3Q9Y5H0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHGA3Q9Y5H0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGA3Q9Y5H0 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGA3Q9Y5H0 LINC01465-201ENST00000408887 1940 ntBASIC18.23■□□□□ 0.51
PCDHGA3Q9Y5H0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA3Q9Y5H0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA3Q9Y5H0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGA3Q9Y5H0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA3Q9Y5H0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA3Q9Y5H0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA3Q9Y5H0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA3Q9Y5H0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGA3Q9Y5H0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA3Q9Y5H0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHGA3Q9Y5H0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA3Q9Y5H0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA3Q9Y5H0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHGA3Q9Y5H0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA3Q9Y5H0 PCED1CP-201ENST00000419887 785 ntBASIC18.22■□□□□ 0.51
PCDHGA3Q9Y5H0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.22■□□□□ 0.51
PCDHGA3Q9Y5H0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA3Q9Y5H0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGA3Q9Y5H0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHGA3Q9Y5H0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGA3Q9Y5H0 AL441883.1-201ENST00000566170 1045 ntBASIC18.22■□□□□ 0.51
PCDHGA3Q9Y5H0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHGA3Q9Y5H0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHGA3Q9Y5H0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
PCDHGA3Q9Y5H0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PCDHGA3Q9Y5H0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHGA3Q9Y5H0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGA3Q9Y5H0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA3Q9Y5H0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA3Q9Y5H0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA3Q9Y5H0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 AL671277.2-201ENST00000458060 996 ntBASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA3Q9Y5H0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PCDHGA3Q9Y5H0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA3Q9Y5H0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms