Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA7Q9Y5G6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA7Q9Y5G6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PCDHGA7Q9Y5G6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PCDHGA7Q9Y5G6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PCDHGA7Q9Y5G6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
PCDHGA7Q9Y5G6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA7Q9Y5G6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA7Q9Y5G6 HMGA1P5-201ENST00000412453 271 ntBASIC18.62■□□□□ 0.57
PCDHGA7Q9Y5G6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHGA7Q9Y5G6 AC063952.2-201ENST00000498792 1227 ntBASIC18.62■□□□□ 0.57
PCDHGA7Q9Y5G6 AP000692.2-201ENST00000608391 879 ntBASIC18.62■□□□□ 0.57
PCDHGA7Q9Y5G6 AC130371.2-201ENST00000619443 611 ntBASIC18.62■□□□□ 0.57
PCDHGA7Q9Y5G6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA7Q9Y5G6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA7Q9Y5G6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA7Q9Y5G6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA7Q9Y5G6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA7Q9Y5G6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHGA7Q9Y5G6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA7Q9Y5G6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
PCDHGA7Q9Y5G6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA7Q9Y5G6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGA7Q9Y5G6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHGA7Q9Y5G6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA7Q9Y5G6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA7Q9Y5G6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGA7Q9Y5G6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 AC022616.7-201ENST00000525383 220 ntBASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA7Q9Y5G6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 AC091076.1-201ENST00000610741 619 ntBASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA7Q9Y5G6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGA7Q9Y5G6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PCDHGA7Q9Y5G6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGA7Q9Y5G6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGA7Q9Y5G6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGA7Q9Y5G6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA7Q9Y5G6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGA7Q9Y5G6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGA7Q9Y5G6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA7Q9Y5G6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms