Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 AC087289.5-201ENST00000586076 3175 ntBASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 AC098818.2-201ENST00000564925 2320 ntBASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB2Q9Y5E7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PCDHB2Q9Y5E7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB2Q9Y5E7 KRT8P3-201ENST00000519669 1449 ntBASIC20.54■□□□□ 0.88
PCDHB2Q9Y5E7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB2Q9Y5E7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB2Q9Y5E7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PCDHB2Q9Y5E7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB2Q9Y5E7 UPK3BP1-201ENST00000428678 509 ntBASIC20.54■□□□□ 0.88
PCDHB2Q9Y5E7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDHB2Q9Y5E7 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.54■□□□□ 0.88
PCDHB2Q9Y5E7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB2Q9Y5E7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PCDHB2Q9Y5E7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB2Q9Y5E7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB2Q9Y5E7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
PCDHB2Q9Y5E7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB2Q9Y5E7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHB2Q9Y5E7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
PCDHB2Q9Y5E7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB2Q9Y5E7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB2Q9Y5E7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB2Q9Y5E7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB2Q9Y5E7 STARP1-201ENST00000397973 869 ntBASIC20.53■□□□□ 0.88
PCDHB2Q9Y5E7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB2Q9Y5E7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDHB2Q9Y5E7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB2Q9Y5E7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHB2Q9Y5E7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHB2Q9Y5E7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PCDHB2Q9Y5E7 AP000550.4-202ENST00000639755 178 ntBASIC20.53■□□□□ 0.88
PCDHB2Q9Y5E7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB2Q9Y5E7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB2Q9Y5E7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHB2Q9Y5E7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDHB2Q9Y5E7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHB2Q9Y5E7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB2Q9Y5E7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PCDHB2Q9Y5E7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PCDHB2Q9Y5E7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB2Q9Y5E7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB2Q9Y5E7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHB2Q9Y5E7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
PCDHB2Q9Y5E7 AC036111.1-201ENST00000533973 1582 ntBASIC20.52■□□□□ 0.88
PCDHB2Q9Y5E7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHB2Q9Y5E7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.52■□□□□ 0.88
PCDHB2Q9Y5E7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.52■□□□□ 0.88
PCDHB2Q9Y5E7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHB2Q9Y5E7 PCED1CP-201ENST00000419887 785 ntBASIC20.52■□□□□ 0.88
PCDHB2Q9Y5E7 AC112907.2-201ENST00000448639 330 ntBASIC20.52■□□□□ 0.88
PCDHB2Q9Y5E7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.52■□□□□ 0.88
PCDHB2Q9Y5E7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHB2Q9Y5E7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHB2Q9Y5E7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHB2Q9Y5E7 AL161938.1-201ENST00000569833 2180 ntBASIC20.52■□□□□ 0.88
PCDHB2Q9Y5E7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PCDHB2Q9Y5E7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDHB2Q9Y5E7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDHB2Q9Y5E7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
PCDHB2Q9Y5E7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDHB2Q9Y5E7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDHB2Q9Y5E7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB2Q9Y5E7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB2Q9Y5E7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHB2Q9Y5E7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB2Q9Y5E7 RNF165-205ENST00000588679 2904 ntBASIC20.51■□□□□ 0.87
PCDHB2Q9Y5E7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB2Q9Y5E7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.51■□□□□ 0.87
PCDHB2Q9Y5E7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB2Q9Y5E7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB2Q9Y5E7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB2Q9Y5E7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB2Q9Y5E7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB2Q9Y5E7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB2Q9Y5E7 MCCD1P1-208ENST00000445732 328 ntBASIC20.51■□□□□ 0.87
PCDHB2Q9Y5E7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB2Q9Y5E7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
PCDHB2Q9Y5E7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDHB2Q9Y5E7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
PCDHB2Q9Y5E7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHB2Q9Y5E7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
PCDHB2Q9Y5E7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
PCDHB2Q9Y5E7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHB2Q9Y5E7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDHB2Q9Y5E7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB2Q9Y5E7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHB2Q9Y5E7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms